RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 SMIM20Q8N5G0 67 aa1.45□□□□□ -2.18
SCN8A-210ENST00000627665 OR10J5Q8NHC4 309 aa1.45□□□□□ -2.18
SCN8A-210ENST00000627665 LSM10Q969L4 123 aaKnown RBP1.45□□□□□ -2.18
SCN8A-210ENST00000627665 LINC00052Q96N35 136 aa1.45□□□□□ -2.18
SCN8A-210ENST00000627665 MIXL1Q9H2W2 232 aa1.45□□□□□ -2.18
SCN8A-210ENST00000627665 C8orf4Q9NR00 106 aa1.45□□□□□ -2.18
SCN8A-210ENST00000627665 SAR1AQ9NR31 198 aa1.45□□□□□ -2.18
SCN8A-210ENST00000627665 BET1LQ9NYM9 111 aa1.45□□□□□ -2.18
SCN8A-210ENST00000627665 EPDR1Q9UM22 224 aa1.45□□□□□ -2.18
SCN8A-210ENST00000627665 TRBV6-7A0A0A0MS04 114 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 TRGV4A0A0C4DH28 118 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 DUXBA0A1W2PPF3 345 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 C7orf71A4D174 169 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 C1orf196B1AJZ1 125 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 IBA57-AS1B1ANH7 110 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 I3L2K1 104 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 M0R2Z0 102 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 GNGT2O14610 69 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 TRGC1P0CF51 173 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 COX4I1P13073 169 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 ETV6P41212 452 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 CRYBA4P53673 196 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 PRCDQ00LT1 54 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 SPINK13Q1W4C9 94 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 SPANXN5Q5MJ07 72 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 TERB2Q8NHR7 220 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 TMEM263Q8WUH6 116 aaKnown RBP1.44□□□□□ -2.18
SCN8A-210ENST00000627665 PYDC1Q8WXC3 89 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 TMEM203Q969S6 136 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 HIST1H2BLQ99880 126 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 CST9LQ9H4G1 147 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 SPANXA1Q9NS26 97 aa1.44□□□□□ -2.18
SCN8A-210ENST00000627665 MUC17Q685J3 4493 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 TRGV2A0A075B6R0 118 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 TRAV12-2A0A075B6T6 113 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 MEIS3P1A6NDR6 274 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 F8W036 122 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 J3QRE1 110 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 GPR31O00270 319 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 EDF1O60869 148 aaKnown RBP1.43□□□□□ -2.18
SCN8A-210ENST00000627665 PITX3O75364 302 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 UBBP0CG47 229 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 SRIP30626 198 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 LINC01554Q52M75 96 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 LINC01556Q5JQF7 62 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 C12orf73Q69YU5 71 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 ACBD7Q8N6N7 88 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 NUP35Q8NFH5 326 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 OR5A1Q8NGJ0 315 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 CANT1Q8WVQ1 401 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 CCDC32Q9BV29 185 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 NDUFA4L2Q9NRX3 87 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 TAS2R8Q9NYW2 309 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 TP73-AS1Q9UF72 201 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 SS18L2Q9UHA2 77 aa1.43□□□□□ -2.18
SCN8A-210ENST00000627665 SYNE2Q8WXH0 6885 aaKnown RBP1.42□□□□□ -2.18
SCN8A-210ENST00000627665 TMSB15BA0A087X1C1 80 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 MAP1LC3B2A6NCE7 125 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 SDHAF1A6NFY7 115 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 A8MTW9 85 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 H7BYZ3 331 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 SNAPC5O75971 98 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 IGHV3-30P01768 117 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 IGHV3-33P01772 117 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 IGHV3-30-5P0DP03 117 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 S100GP29377 79 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 GTF2A1P52655 376 aaPredicted RBP1.42□□□□□ -2.18
SCN8A-210ENST00000627665 DEFA3P59666 94 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 UBE2BP63146 152 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 SUPT4H1P63272 117 aaKnown RBP1.42□□□□□ -2.18
SCN8A-210ENST00000627665 SAMD13Q5VXD3 122 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 SPINK6Q6UWN8 80 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 ATP6V0E2Q8NHE4 81 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 MBD3L1Q8WWY6 194 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 ARHGAP5-AS1Q96IT6 56 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 MAP1LC3BQ9GZQ8 125 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 RPRMQ9NS64 109 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 SPANXCQ9NY87 97 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 FKBP11Q9NYL4 201 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 PRO0255Q9UI72 69 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 HSPB11Q9Y547 144 aa1.42□□□□□ -2.18
SCN8A-210ENST00000627665 TRAV30A0A087WSZ9 112 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 TRGV1A0A0A0MS02 117 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 H3BRN7 92 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 CORTO00230 105 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 PMP2P02689 132 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 CATR1Q13166 79 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 INSL4Q14641 139 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 ZNF846Q147U1 533 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 ELOBQ15370 118 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 CCDC58Q4VC31 144 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 XAF1Q6GPH4 301 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 DHFR2Q86XF0 187 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 MAFIPQ8WZ33 124 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 PLEKHB2Q96CS7 222 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 DPH3Q96FX2 82 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 ZC2HC1AQ96GY0 325 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 TSC22D3Q99576 134 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 TXNDC17Q9BRA2 123 aa1.41□□□□□ -2.18
SCN8A-210ENST00000627665 LPAR5Q9H1C0 372 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms