RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SPANXDQ9BXN6 97 aa11.39□□□□□ -0.59
LDB3-208ENST00000623007 SPANXCQ9NY87 97 aa11.39□□□□□ -0.59
LDB3-208ENST00000623007 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
LDB3-208ENST00000623007 TMEM262E9PQX1 116 aa11.38□□□□□ -0.59
LDB3-208ENST00000623007 IFITM1P13164 125 aa11.38□□□□□ -0.59
LDB3-208ENST00000623007 SS18Q15532 418 aa11.38□□□□□ -0.59
LDB3-208ENST00000623007 LELP1Q5T871 98 aa11.37□□□□□ -0.59
LDB3-208ENST00000623007 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 H3BUT2 72 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 COX6A2Q02221 97 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 LYRM7Q5U5X0 104 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 C10orf126Q8N4M7 172 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 TENM1Q9UKZ4 2725 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 A0A1W2PPM0 123 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 GAGE10A6NGK3 116 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 RAB37Q96AX2 223 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 PPDPFQ9H3Y8 114 aa11.36□□□□□ -0.59
LDB3-208ENST00000623007 IGLV4-60A0A075B6I1 120 aa11.35□□□□□ -0.59
LDB3-208ENST00000623007 G3V4G9 280 aa11.35□□□□□ -0.59
LDB3-208ENST00000623007 RBX1P62877 108 aa11.35□□□□□ -0.59
LDB3-208ENST00000623007 SPATA25Q9BR10 227 aa11.34□□□□□ -0.59
LDB3-208ENST00000623007 A0A087WZ39 114 aa11.33□□□□□ -0.6
LDB3-208ENST00000623007 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
LDB3-208ENST00000623007 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
LDB3-208ENST00000623007 HTN3P15516 51 aa11.33□□□□□ -0.6
LDB3-208ENST00000623007 MIAQ16674 131 aa11.33□□□□□ -0.6
LDB3-208ENST00000623007 A0A0B4J2C4 111 aa11.32□□□□□ -0.6
LDB3-208ENST00000623007 IGLL5B9A064 214 aa11.32□□□□□ -0.6
LDB3-208ENST00000623007 K7EP13 123 aa11.32□□□□□ -0.6
LDB3-208ENST00000623007 K7EP34 96 aa11.32□□□□□ -0.6
LDB3-208ENST00000623007 Q9H8V8 135 aa11.31□□□□□ -0.6
LDB3-208ENST00000623007 VWFP04275 2813 aa11.31□□□□□ -0.6
LDB3-208ENST00000623007 A0A096LPF7 62 aa11.3□□□□□ -0.6
LDB3-208ENST00000623007 KPRPQ5T749 579 aaPredicted RBP11.3□□□□□ -0.6
LDB3-208ENST00000623007 LITAFQ99732 161 aa11.3□□□□□ -0.6
LDB3-208ENST00000623007 MDFIQ99750 246 aa11.3□□□□□ -0.6
LDB3-208ENST00000623007 SPCS1Q9Y6A9 102 aa11.3□□□□□ -0.6
LDB3-208ENST00000623007 K7ERJ3 54 aa11.3□□□□□ -0.6
LDB3-208ENST00000623007 COX7B2Q8TF08 81 aa11.3□□□□□ -0.6
LDB3-208ENST00000623007 PRO1854Q9UHT4 67 aa11.3□□□□□ -0.6
LDB3-208ENST00000623007 MUSTN1Q8IVN3 82 aa11.29□□□□□ -0.6
LDB3-208ENST00000623007 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
LDB3-208ENST00000623007 PRSS2P07478 247 aa11.28□□□□□ -0.6
LDB3-208ENST00000623007 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
LDB3-208ENST00000623007 FBN1P35555 2871 aaKnown RBP11.28□□□□□ -0.6
LDB3-208ENST00000623007 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.6
LDB3-208ENST00000623007 A4D1N5 150 aa11.27□□□□□ -0.6
LDB3-208ENST00000623007 CD164L2Q6UWJ8 174 aa11.27□□□□□ -0.6
LDB3-208ENST00000623007 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.6
LDB3-208ENST00000623007 APOMO95445 188 aa11.27□□□□□ -0.61
LDB3-208ENST00000623007 ANGP03950 147 aaKnown RBP11.27□□□□□ -0.61
LDB3-208ENST00000623007 CFC1BP0CG36 223 aa11.27□□□□□ -0.61
LDB3-208ENST00000623007 CFC1P0CG37 223 aa11.27□□□□□ -0.61
LDB3-208ENST00000623007 REG3AQ06141 175 aa11.27□□□□□ -0.61
LDB3-208ENST00000623007 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.61
LDB3-208ENST00000623007 RETNQ9HD89 108 aa11.27□□□□□ -0.61
LDB3-208ENST00000623007 CXCL5P42830 114 aa11.26□□□□□ -0.61
LDB3-208ENST00000623007 LYPD5Q6UWN5 251 aa11.26□□□□□ -0.61
LDB3-208ENST00000623007 TM2D3Q9BRN9 247 aa11.26□□□□□ -0.61
LDB3-208ENST00000623007 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
LDB3-208ENST00000623007 Q8IZM0 81 aa11.25□□□□□ -0.61
LDB3-208ENST00000623007 Q6ZTC4 211 aa11.24□□□□□ -0.61
LDB3-208ENST00000623007 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
LDB3-208ENST00000623007 TRBV20-1A0A075B6N2 111 aa11.24□□□□□ -0.61
LDB3-208ENST00000623007 TRAV8-4A0A0B4J246 113 aa11.24□□□□□ -0.61
LDB3-208ENST00000623007 IBA57-AS1B1ANH7 110 aa11.24□□□□□ -0.61
LDB3-208ENST00000623007 DEFB131BA0A096LNP1 70 aa11.23□□□□□ -0.61
LDB3-208ENST00000623007 COX7A2LO14548 114 aa11.23□□□□□ -0.61
LDB3-208ENST00000623007 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
LDB3-208ENST00000623007 PRR34Q9NV39 138 aa11.23□□□□□ -0.61
LDB3-208ENST00000623007 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
LDB3-208ENST00000623007 TRAV10A0A0B4J240 114 aa11.22□□□□□ -0.61
LDB3-208ENST00000623007 TSPAN13O95857 204 aa11.22□□□□□ -0.61
LDB3-208ENST00000623007 XCL1P47992 114 aa11.22□□□□□ -0.61
LDB3-208ENST00000623007 ADAMTSL4-AS1Q5T5F5 129 aa11.22□□□□□ -0.61
LDB3-208ENST00000623007 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.61
LDB3-208ENST00000623007 TOMM7Q9P0U1 55 aa11.21□□□□□ -0.61
LDB3-208ENST00000623007 C5orf38Q86SI9 138 aa11.2□□□□□ -0.62
LDB3-208ENST00000623007 MUC7Q8TAX7 377 aa11.2□□□□□ -0.62
LDB3-208ENST00000623007 CHCHD10Q8WYQ3 142 aaPredicted RBP11.2□□□□□ -0.62
LDB3-208ENST00000623007 F8W1H4 67 aa11.2□□□□□ -0.62
LDB3-208ENST00000623007 K7EIL1 84 aa11.2□□□□□ -0.62
LDB3-208ENST00000623007 CRPP02741 224 aa11.2□□□□□ -0.62
LDB3-208ENST00000623007 LINC00308Q8TCZ7 52 aa11.2□□□□□ -0.62
LDB3-208ENST00000623007 NAA38Q9BRA0 125 aaKnown RBP11.2□□□□□ -0.62
LDB3-208ENST00000623007 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
LDB3-208ENST00000623007 MALP21145 153 aa11.19□□□□□ -0.62
LDB3-208ENST00000623007 DEFB121Q5J5C9 76 aa11.19□□□□□ -0.62
LDB3-208ENST00000623007 COX6CP09669 75 aa11.18□□□□□ -0.62
LDB3-208ENST00000623007 COX17Q14061 63 aa11.18□□□□□ -0.62
LDB3-208ENST00000623007 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
LDB3-208ENST00000623007 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
LDB3-208ENST00000623007 NANOS2P60321 138 aaKnown RBP11.17□□□□□ -0.62
LDB3-208ENST00000623007 CKS1BP61024 79 aa11.17□□□□□ -0.62
LDB3-208ENST00000623007 ARL17AQ8IVW1 177 aa11.17□□□□□ -0.62
LDB3-208ENST00000623007 FBN3Q75N90 2809 aa11.17□□□□□ -0.62
LDB3-208ENST00000623007 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
LDB3-208ENST00000623007 Q1RN00 199 aa11.16□□□□□ -0.62
LDB3-208ENST00000623007 KLK5Q9Y337 293 aaPredicted RBP11.16□□□□□ -0.62
LDB3-208ENST00000623007 COL6A5A8TX70 2615 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms