RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 PRO0461Q9UI25 63 aa12.43□□□□□ -0.42
ZNF48-206ENST00000622647 IGLV5-45A0A087WSX0 123 aa12.43□□□□□ -0.42
ZNF48-206ENST00000622647 SMIM1B2RUZ4 78 aa12.43□□□□□ -0.42
ZNF48-206ENST00000622647 G3V4G9 280 aa12.43□□□□□ -0.42
ZNF48-206ENST00000622647 IGHV3-33P01772 117 aa12.43□□□□□ -0.42
ZNF48-206ENST00000622647 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
ZNF48-206ENST00000622647 TRBV6-8A0A0A6YYG3 113 aa12.42□□□□□ -0.42
ZNF48-206ENST00000622647 INSL3P51460 131 aa12.42□□□□□ -0.42
ZNF48-206ENST00000622647 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
ZNF48-206ENST00000622647 CSDC2Q9Y534 153 aaKnown RBP12.41□□□□□ -0.42
ZNF48-206ENST00000622647 TMEM262E9PQX1 116 aa12.41□□□□□ -0.42
ZNF48-206ENST00000622647 SMCPP49901 116 aaPredicted RBP12.41□□□□□ -0.42
ZNF48-206ENST00000622647 TOMM7Q9P0U1 55 aa12.41□□□□□ -0.42
ZNF48-206ENST00000622647 CLPSL2Q6UWE3 100 aa12.4□□□□□ -0.42
ZNF48-206ENST00000622647 PCP4P48539 62 aa12.4□□□□□ -0.42
ZNF48-206ENST00000622647 MIAQ16674 131 aa12.4□□□□□ -0.42
ZNF48-206ENST00000622647 CITED1Q99966 193 aa12.39□□□□□ -0.43
ZNF48-206ENST00000622647 IGLV5-39A0A0G2JS06 123 aa12.38□□□□□ -0.43
ZNF48-206ENST00000622647 F5H768 121 aa12.38□□□□□ -0.43
ZNF48-206ENST00000622647 NDUFA1O15239 70 aa12.38□□□□□ -0.43
ZNF48-206ENST00000622647 PRIMA1Q86XR5 153 aa12.38□□□□□ -0.43
ZNF48-206ENST00000622647 MEIG1Q5JSS6 88 aa12.38□□□□□ -0.43
ZNF48-206ENST00000622647 ATP6V0E2Q8NHE4 81 aa12.38□□□□□ -0.43
ZNF48-206ENST00000622647 KIR2DL5BQ8NHK3 375 aa12.38□□□□□ -0.43
ZNF48-206ENST00000622647 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.37□□□□□ -0.43
ZNF48-206ENST00000622647 A0A0B4J2C4 111 aa12.37□□□□□ -0.43
ZNF48-206ENST00000622647 SPANXDQ9BXN6 97 aa12.37□□□□□ -0.43
ZNF48-206ENST00000622647 SPANXCQ9NY87 97 aa12.37□□□□□ -0.43
ZNF48-206ENST00000622647 IGHV4-28A0A0C4DH34 117 aa12.36□□□□□ -0.43
ZNF48-206ENST00000622647 HTN3P15516 51 aa12.36□□□□□ -0.43
ZNF48-206ENST00000622647 C5orf38Q86SI9 138 aa12.36□□□□□ -0.43
ZNF48-206ENST00000622647 STAB1Q9NY15 2570 aa12.36□□□□□ -0.43
ZNF48-206ENST00000622647 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
ZNF48-206ENST00000622647 C11orf68Q9H3H3 251 aaKnown RBP12.35□□□□□ -0.43
ZNF48-206ENST00000622647 PAX4O43316 350 aa12.34□□□□□ -0.43
ZNF48-206ENST00000622647 Q8N3U1 123 aa12.34□□□□□ -0.43
ZNF48-206ENST00000622647 CIDEAO60543 219 aa12.34□□□□□ -0.43
ZNF48-206ENST00000622647 SMAGPQ0VAQ4 97 aa12.34□□□□□ -0.43
ZNF48-206ENST00000622647 TRIAP1O43715 76 aa12.34□□□□□ -0.43
ZNF48-206ENST00000622647 CIRBPQ14011 172 aaKnown RBP12.34□□□□□ -0.43
ZNF48-206ENST00000622647 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
ZNF48-206ENST00000622647 OXLD1Q5BKU9 147 aa12.33□□□□□ -0.44
ZNF48-206ENST00000622647 PRO0255Q9UI72 69 aa12.33□□□□□ -0.44
ZNF48-206ENST00000622647 SOSTDC1Q6X4U4 206 aa12.33□□□□□ -0.44
ZNF48-206ENST00000622647 FAM19A3Q7Z5A8 133 aa12.33□□□□□ -0.44
ZNF48-206ENST00000622647 LINC00308Q8TCZ7 52 aa12.33□□□□□ -0.44
ZNF48-206ENST00000622647 PKD1L1Q8TDX9 2849 aa12.32□□□□□ -0.44
ZNF48-206ENST00000622647 LYRM7Q5U5X0 104 aa12.32□□□□□ -0.44
ZNF48-206ENST00000622647 C9JAW5 83 aa12.32□□□□□ -0.44
ZNF48-206ENST00000622647 XCL1P47992 114 aa12.32□□□□□ -0.44
ZNF48-206ENST00000622647 SMIM9A6NGZ8 99 aa12.31□□□□□ -0.44
ZNF48-206ENST00000622647 IGHV4-30-4P0DP06 118 aa12.31□□□□□ -0.44
ZNF48-206ENST00000622647 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
ZNF48-206ENST00000622647 APOC4P55056 127 aa12.31□□□□□ -0.44
ZNF48-206ENST00000622647 DAD1P61803 113 aa12.31□□□□□ -0.44
ZNF48-206ENST00000622647 FBN1P35555 2871 aaKnown RBP12.3□□□□□ -0.44
ZNF48-206ENST00000622647 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
ZNF48-206ENST00000622647 H7C423 109 aa12.3□□□□□ -0.44
ZNF48-206ENST00000622647 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
ZNF48-206ENST00000622647 COX7B2Q8TF08 81 aa12.29□□□□□ -0.44
ZNF48-206ENST00000622647 CLEC2BQ92478 149 aa12.29□□□□□ -0.44
ZNF48-206ENST00000622647 ICOSQ9Y6W8 199 aa12.29□□□□□ -0.44
ZNF48-206ENST00000622647 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
ZNF48-206ENST00000622647 TIMM17BO60830 172 aa12.28□□□□□ -0.44
ZNF48-206ENST00000622647 IGHV3OR16-9A0A0B4J2B5 98 aa12.27□□□□□ -0.44
ZNF48-206ENST00000622647 IGLV10-54A0A075B6I4 117 aa12.27□□□□□ -0.45
ZNF48-206ENST00000622647 LYRM9A8MSI8 78 aa12.27□□□□□ -0.45
ZNF48-206ENST00000622647 MAST4O15021 2626 aa12.27□□□□□ -0.45
ZNF48-206ENST00000622647 Q8NAQ8 132 aa12.26□□□□□ -0.45
ZNF48-206ENST00000622647 RETNQ9HD89 108 aa12.26□□□□□ -0.45
ZNF48-206ENST00000622647 IFITM1P13164 125 aa12.26□□□□□ -0.45
ZNF48-206ENST00000622647 SLC25A20O43772 301 aa12.25□□□□□ -0.45
ZNF48-206ENST00000622647 PFN2P35080 140 aa12.25□□□□□ -0.45
ZNF48-206ENST00000622647 FOXI1Q12951 378 aa12.25□□□□□ -0.45
ZNF48-206ENST00000622647 LINC00269Q8N2A0 174 aa12.25□□□□□ -0.45
ZNF48-206ENST00000622647 ANKRD29Q8N6D5 301 aa12.25□□□□□ -0.45
ZNF48-206ENST00000622647 CARD19Q96LW7 228 aa12.25□□□□□ -0.45
ZNF48-206ENST00000622647 WFDC9Q8NEX5 89 aa12.24□□□□□ -0.45
ZNF48-206ENST00000622647 TRBV30A0A0K0K1B3 111 aa12.24□□□□□ -0.45
ZNF48-206ENST00000622647 LINC00158P58513 81 aa12.24□□□□□ -0.45
ZNF48-206ENST00000622647 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
ZNF48-206ENST00000622647 ATXN8Q156A1 80 aa12.23□□□□□ -0.45
ZNF48-206ENST00000622647 LINC01620Q4KN68 170 aa12.23□□□□□ -0.45
ZNF48-206ENST00000622647 J3QR89 54 aa12.22□□□□□ -0.45
ZNF48-206ENST00000622647 ATP5G1P05496 136 aa12.22□□□□□ -0.45
ZNF48-206ENST00000622647 KRTAP10-11P60412 298 aa12.22□□□□□ -0.45
ZNF48-206ENST00000622647 ANGP03950 147 aaKnown RBP12.22□□□□□ -0.45
ZNF48-206ENST00000622647 KRTAP24-1Q3LI83 254 aa12.22□□□□□ -0.45
ZNF48-206ENST00000622647 C2orf82Q6UX34 121 aa12.22□□□□□ -0.45
ZNF48-206ENST00000622647 A0A087WZ39 114 aa12.21□□□□□ -0.45
ZNF48-206ENST00000622647 RNF183Q96D59 192 aa12.21□□□□□ -0.45
ZNF48-206ENST00000622647 GAGE12HA6NDE8 117 aa12.21□□□□□ -0.46
ZNF48-206ENST00000622647 HERV-K104P63124 156 aa12.21□□□□□ -0.46
ZNF48-206ENST00000622647 SS18Q15532 418 aa12.21□□□□□ -0.46
ZNF48-206ENST00000622647 C6orf226Q5I0X4 101 aa12.21□□□□□ -0.46
ZNF48-206ENST00000622647 TEN1Q86WV5 123 aa12.21□□□□□ -0.46
ZNF48-206ENST00000622647 NOTCH1P46531 2555 aa12.2□□□□□ -0.46
ZNF48-206ENST00000622647 SPART-AS1P0CW21 52 aa12.2□□□□□ -0.46
ZNF48-206ENST00000622647 MIFP14174 115 aa12.2□□□□□ -0.46
ZNF48-206ENST00000622647 ANK2Q01484 3957 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms