RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	CRYGA	P11844	174 aa		10.3	□□□□□ -0.76
SYNRG-231	ENST00000622045	MAP6D1	Q9H9H5	199 aa		10.3	□□□□□ -0.76
SYNRG-231	ENST00000622045	SLPI	P03973	132 aa		10.3	□□□□□ -0.76
SYNRG-231	ENST00000622045	CRP	P02741	224 aa		10.29	□□□□□ -0.76
SYNRG-231	ENST00000622045	RPL36A	P83881	106 aa	Known RBP	10.29	□□□□□ -0.76
SYNRG-231	ENST00000622045	RNF152	Q8N8N0	203 aa		10.29	□□□□□ -0.76
SYNRG-231	ENST00000622045	RPL36AL	Q969Q0	106 aa	Known RBP	10.29	□□□□□ -0.76
SYNRG-231	ENST00000622045	LINC00846	Q9NV44	126 aa		10.29	□□□□□ -0.76
SYNRG-231	ENST00000622045	RPL18A	Q02543	176 aa	Known RBP	10.29	□□□□□ -0.76
SYNRG-231	ENST00000622045	ZNF702P	Q9H963	129 aa		10.29	□□□□□ -0.76
SYNRG-231	ENST00000622045	OR13C6P	Q8NH95	151 aa		10.29	□□□□□ -0.76
SYNRG-231	ENST00000622045	JMJD1C	Q15652	2540 aa		10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	IGLV5-39	A0A0G2JS06	123 aa		10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	NCR3	O14931	201 aa		10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	HIST1H4A	P62805	103 aa	Known RBP	10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	HIST2H2BC	Q6DN03	193 aa		10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	DSCR9	P59020	149 aa		10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	STH	Q8IWL8	128 aa		10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	LINC00337	Q8N6G1	96 aa		10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	C11orf72	Q8NBR9	251 aa		10.28	□□□□□ -0.76
SYNRG-231	ENST00000622045	LRRK2	Q5S007	2527 aa		10.27	□□□□□ -0.76
SYNRG-231	ENST00000622045	ITPR1	Q14643	2758 aa		10.27	□□□□□ -0.76
SYNRG-231	ENST00000622045	IGLV5-45	A0A087WSX0	123 aa		10.27	□□□□□ -0.77
SYNRG-231	ENST00000622045	UBE2L6	O14933	153 aa		10.27	□□□□□ -0.77
SYNRG-231	ENST00000622045	MIR7-3HG	Q8N6C7	128 aa		10.27	□□□□□ -0.77
SYNRG-231	ENST00000622045	ABCA12	Q86UK0	2595 aa		10.27	□□□□□ -0.77
SYNRG-231	ENST00000622045	C11orf44	Q8N8P7	122 aa		10.26	□□□□□ -0.77
SYNRG-231	ENST00000622045	WFDC9	Q8NEX5	89 aa		10.26	□□□□□ -0.77
SYNRG-231	ENST00000622045	LECT2	O14960	151 aa		10.26	□□□□□ -0.77
SYNRG-231	ENST00000622045	FAM222A	Q5U5X8	452 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	DPH3	Q96FX2	82 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	SND1-IT1	Q9HBX3	110 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	CFAP46	Q8IYW2	2715 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	OXT	P01178	125 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	LINC00158	P58513	81 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	C4orf26	Q17RF5	130 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	SMIM11B	Q8TCY0	68 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	EPG5	Q9HCE0	2579 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	PRORY	Q9H606	182 aa		10.25	□□□□□ -0.77
SYNRG-231	ENST00000622045	USP17L23	D6RBM5	183 aa		10.24	□□□□□ -0.77
SYNRG-231	ENST00000622045		Q96MF0	132 aa		10.24	□□□□□ -0.77
SYNRG-231	ENST00000622045		J3QLI3	93 aa		10.24	□□□□□ -0.77
SYNRG-231	ENST00000622045		Q6YL49	198 aa		10.24	□□□□□ -0.77
SYNRG-231	ENST00000622045	UTP20	O75691	2785 aa	Known RBP	10.24	□□□□□ -0.77
SYNRG-231	ENST00000622045	HILS1	P60008	231 aa		10.24	□□□□□ -0.77
SYNRG-231	ENST00000622045	SERP2	Q8N6R1	65 aa		10.24	□□□□□ -0.77
SYNRG-231	ENST00000622045	CCDC168	Q8NDH2	2452 aa		10.24	□□□□□ -0.77
SYNRG-231	ENST00000622045	DEFB114	Q30KQ6	69 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045	HRCT1	Q6UXD1	115 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045		Q6ZTI0	123 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045	CSMD2	Q7Z408	3487 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045		A0A1W2PRX2	142 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045	PFN2	P35080	140 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045	LINC01561	Q8N1V8	128 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045	TRAV13-2	A0A0B4J235	113 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045	MXRA5	Q9NR99	2828 aa		10.23	□□□□□ -0.77
SYNRG-231	ENST00000622045	IGKV2-28	A0A075B6P5	120 aa		10.22	□□□□□ -0.77
SYNRG-231	ENST00000622045	IGKV2D-28	P01615	120 aa		10.22	□□□□□ -0.77
SYNRG-231	ENST00000622045	ZFYVE26	Q68DK2	2539 aa		10.22	□□□□□ -0.77
SYNRG-231	ENST00000622045		K7EQD1	137 aa		10.22	□□□□□ -0.77
SYNRG-231	ENST00000622045	C11orf68	Q9H3H3	251 aa	Known RBP	10.22	□□□□□ -0.77
SYNRG-231	ENST00000622045	CHD6	Q8TD26	2715 aa		10.22	□□□□□ -0.77
SYNRG-231	ENST00000622045	RPL28	P46779	137 aa	Known RBP	10.22	□□□□□ -0.77
SYNRG-231	ENST00000622045		A8MTW9	85 aa		10.21	□□□□□ -0.77
SYNRG-231	ENST00000622045	TRGV2	A0A075B6R0	118 aa		10.21	□□□□□ -0.78
SYNRG-231	ENST00000622045	NOP10	Q9NPE3	64 aa	Known RBP	10.21	□□□□□ -0.78
SYNRG-231	ENST00000622045	NTM-AS1	Q6ZSK4	140 aa		10.21	□□□□□ -0.78
SYNRG-231	ENST00000622045	CDC42SE2	Q9NRR3	84 aa		10.2	□□□□□ -0.78
SYNRG-231	ENST00000622045		F5H768	121 aa		10.2	□□□□□ -0.78
SYNRG-231	ENST00000622045	PAX4	O43316	350 aa		10.2	□□□□□ -0.78
SYNRG-231	ENST00000622045	RPS28	P62857	69 aa	Known RBP	10.2	□□□□□ -0.78
SYNRG-231	ENST00000622045	TMEM243	Q9BU79	118 aa		10.2	□□□□□ -0.78
SYNRG-231	ENST00000622045	TRAV23DV6	A0A075B6W5	121 aa		10.19	□□□□□ -0.78
SYNRG-231	ENST00000622045	RNASE1	P07998	156 aa	Known RBP	10.19	□□□□□ -0.78
SYNRG-231	ENST00000622045	TMEM258	P61165	79 aa		10.19	□□□□□ -0.78
SYNRG-231	ENST00000622045		Q6JHZ5	121 aa		10.19	□□□□□ -0.78
SYNRG-231	ENST00000622045	C1orf158	Q8N1D5	194 aa		10.19	□□□□□ -0.78
SYNRG-231	ENST00000622045	PIEZO1	Q92508	2521 aa		10.19	□□□□□ -0.78
SYNRG-231	ENST00000622045	TRBV10-1	A0A0K0K1A3	114 aa		10.18	□□□□□ -0.78
SYNRG-231	ENST00000622045	C4orf3	Q8WVX3	66 aa		10.18	□□□□□ -0.78
SYNRG-231	ENST00000622045	UPK3B	Q9BT76	320 aa		10.18	□□□□□ -0.78
SYNRG-231	ENST00000622045	TEX15	Q9BXT5	2789 aa		10.18	□□□□□ -0.78
SYNRG-231	ENST00000622045	ODF3L2	Q3SX64	289 aa		10.18	□□□□□ -0.78
SYNRG-231	ENST00000622045	CCL18	P55774	89 aa		10.17	□□□□□ -0.78
SYNRG-231	ENST00000622045	COX7B2	Q8TF08	81 aa		10.17	□□□□□ -0.78
SYNRG-231	ENST00000622045	FN1	P02751	2386 aa	Known RBP	10.16	□□□□□ -0.78
SYNRG-231	ENST00000622045	FHL2	Q14192	279 aa		10.16	□□□□□ -0.78
SYNRG-231	ENST00000622045	GHRH	P01286	108 aa		10.16	□□□□□ -0.78
SYNRG-231	ENST00000622045	FAM19A1	Q7Z5A9	133 aa		10.16	□□□□□ -0.78
SYNRG-231	ENST00000622045	TRGV4	A0A0C4DH28	118 aa		10.15	□□□□□ -0.78
SYNRG-231	ENST00000622045	LOC100131303	A0A0U1RQF7	123 aa		10.15	□□□□□ -0.79
SYNRG-231	ENST00000622045	PF4	P02776	101 aa		10.14	□□□□□ -0.79
SYNRG-231	ENST00000622045	IGHV4-31	P0DP07	118 aa		10.14	□□□□□ -0.79
SYNRG-231	ENST00000622045	RPL35A	P18077	110 aa	Known RBP	10.14	□□□□□ -0.79
SYNRG-231	ENST00000622045	C20orf197	Q8N268	126 aa		10.14	□□□□□ -0.79
SYNRG-231	ENST00000622045	FBN2	P35556	2912 aa		10.13	□□□□□ -0.79
SYNRG-231	ENST00000622045	ENHO	Q6UWT2	76 aa		10.13	□□□□□ -0.79
SYNRG-231	ENST00000622045	OVOL2	Q9BRP0	275 aa		10.13	□□□□□ -0.79
SYNRG-231	ENST00000622045	ZNF462	Q96JM2	2506 aa		10.13	□□□□□ -0.79
SYNRG-231	ENST00000622045		H0YGX0	51 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms