RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 A6NJY4 79 aa12.8□□□□□ -0.36
SEMA6C-210ENST00000621728 SPANXA1Q9NS26 97 aa12.8□□□□□ -0.36
SEMA6C-210ENST00000621728 OCIAD2Q56VL3 154 aa12.8□□□□□ -0.36
SEMA6C-210ENST00000621728 Q8N3U1 123 aa12.8□□□□□ -0.36
SEMA6C-210ENST00000621728 RAB37Q96AX2 223 aa12.8□□□□□ -0.36
SEMA6C-210ENST00000621728 CSMD3Q7Z407 3707 aa12.79□□□□□ -0.36
SEMA6C-210ENST00000621728 DNAH7Q8WXX0 4024 aa12.79□□□□□ -0.36
SEMA6C-210ENST00000621728 IGLL5B9A064 214 aa12.79□□□□□ -0.36
SEMA6C-210ENST00000621728 NHP2Q9NX24 153 aaKnown RBP12.79□□□□□ -0.36
SEMA6C-210ENST00000621728 SH2D6Q7Z4S9 175 aa12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 DYNC2H1Q8NCM8 4307 aaKnown RBP12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 IGLV4-60A0A075B6I1 120 aa12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 ESRGQ1W209 222 aa12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 DGAT2L7PQ6IED9 249 aa12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 TIMM21Q9BVV7 248 aa12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 VCX2Q9H322 139 aa12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 SPANXB1Q9NS25 103 aaPredicted RBP12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 SPCS1Q9Y6A9 102 aa12.78□□□□□ -0.36
SEMA6C-210ENST00000621728 SCGB1D4Q6XE38 83 aa12.77□□□□□ -0.37
SEMA6C-210ENST00000621728 TMEM262E9PQX1 116 aa12.76□□□□□ -0.37
SEMA6C-210ENST00000621728 TMEM170BQ5T4T1 132 aa12.76□□□□□ -0.37
SEMA6C-210ENST00000621728 LELP1Q5T871 98 aa12.76□□□□□ -0.37
SEMA6C-210ENST00000621728 AMELXQ99217 191 aa12.76□□□□□ -0.37
SEMA6C-210ENST00000621728 TGP01266 2768 aa12.76□□□□□ -0.37
SEMA6C-210ENST00000621728 H7C423 109 aa12.75□□□□□ -0.37
SEMA6C-210ENST00000621728 LEPROTO15243 131 aa12.75□□□□□ -0.37
SEMA6C-210ENST00000621728 CDC42SE2Q9NRR3 84 aa12.75□□□□□ -0.37
SEMA6C-210ENST00000621728 MRPS36P82909 103 aaKnown RBP12.74□□□□□ -0.37
SEMA6C-210ENST00000621728 PLEKHB2Q96CS7 222 aa12.74□□□□□ -0.37
SEMA6C-210ENST00000621728 TMEM223A0PJW6 202 aa12.74□□□□□ -0.37
SEMA6C-210ENST00000621728 TMEM101Q96IK0 257 aa12.74□□□□□ -0.37
SEMA6C-210ENST00000621728 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
SEMA6C-210ENST00000621728 J3QQQ9 107 aa12.73□□□□□ -0.37
SEMA6C-210ENST00000621728 WFDC10BQ8IUB3 73 aa12.73□□□□□ -0.37
SEMA6C-210ENST00000621728 C15orf53Q8NAA6 179 aa12.73□□□□□ -0.37
SEMA6C-210ENST00000621728 A0A0J9YXV3 536 aa12.72□□□□□ -0.37
SEMA6C-210ENST00000621728 LGALS3P17931 250 aaKnown RBP12.72□□□□□ -0.37
SEMA6C-210ENST00000621728 TIRAPP58753 221 aa12.72□□□□□ -0.37
SEMA6C-210ENST00000621728 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
SEMA6C-210ENST00000621728 IGKV3OR2-268A0A0C4DH90 116 aa12.71□□□□□ -0.37
SEMA6C-210ENST00000621728 ZNF22P17026 224 aaPredicted RBP12.71□□□□□ -0.37
SEMA6C-210ENST00000621728 K7ERJ3 54 aa12.7□□□□□ -0.38
SEMA6C-210ENST00000621728 SCGB1A1P11684 91 aa12.7□□□□□ -0.38
SEMA6C-210ENST00000621728 UBE2D1P51668 147 aa12.7□□□□□ -0.38
SEMA6C-210ENST00000621728 SMAGPQ0VAQ4 97 aa12.7□□□□□ -0.38
SEMA6C-210ENST00000621728 CLPSL2Q6UWE3 100 aa12.7□□□□□ -0.38
SEMA6C-210ENST00000621728 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
SEMA6C-210ENST00000621728 LYSTQ99698 3801 aa12.69□□□□□ -0.38
SEMA6C-210ENST00000621728 NAA38Q9BRA0 125 aaKnown RBP12.69□□□□□ -0.38
SEMA6C-210ENST00000621728 STARD9Q9P2P6 4700 aa12.69□□□□□ -0.38
SEMA6C-210ENST00000621728 PLECQ15149 4684 aaKnown RBP12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 TINCRA0A1B0GVN0 87 aa12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 IGHV3-30P01768 117 aa12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 IGHV3-33P01772 117 aa12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 IGHV3-30-3P0DP02 117 aa12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 IGHV3-30-5P0DP03 117 aa12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 CFAP161Q6P656 301 aa12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 LINC00588Q9Y4M8 146 aa12.68□□□□□ -0.38
SEMA6C-210ENST00000621728 TENM2Q9NT68 2774 aa12.67□□□□□ -0.38
SEMA6C-210ENST00000621728 TSPEAR-AS2P59090 65 aa12.66□□□□□ -0.38
SEMA6C-210ENST00000621728 APLNQ9ULZ1 77 aa12.66□□□□□ -0.38
SEMA6C-210ENST00000621728 ANGP03950 147 aaKnown RBP12.66□□□□□ -0.38
SEMA6C-210ENST00000621728 LYRM7Q5U5X0 104 aa12.66□□□□□ -0.38
SEMA6C-210ENST00000621728 ZFAND6Q6FIF0 208 aa12.66□□□□□ -0.38
SEMA6C-210ENST00000621728 LINC00269Q8N2A0 174 aa12.66□□□□□ -0.38
SEMA6C-210ENST00000621728 COX6A2Q02221 97 aa12.65□□□□□ -0.38
SEMA6C-210ENST00000621728 F8W1H4 67 aa12.64□□□□□ -0.39
SEMA6C-210ENST00000621728 LINC00242Q5T6M2 205 aa12.64□□□□□ -0.39
SEMA6C-210ENST00000621728 NUPR2A6NF83 97 aa12.63□□□□□ -0.39
SEMA6C-210ENST00000621728 KLK12Q9UKR0 248 aa12.63□□□□□ -0.39
SEMA6C-210ENST00000621728 IGHV1-58A0A0C4DH39 117 aa12.62□□□□□ -0.39
SEMA6C-210ENST00000621728 CCL18P55774 89 aa12.62□□□□□ -0.39
SEMA6C-210ENST00000621728 LINC00959A0A1B0GUT2 108 aa12.61□□□□□ -0.39
SEMA6C-210ENST00000621728 PGPEP1Q9NXJ5 209 aa12.61□□□□□ -0.39
SEMA6C-210ENST00000621728 A0A1B0GV72 72 aa12.6□□□□□ -0.39
SEMA6C-210ENST00000621728 RPL24P83731 157 aaKnown RBP12.6□□□□□ -0.39
SEMA6C-210ENST00000621728 FAM19A3Q7Z5A8 133 aa12.6□□□□□ -0.39
SEMA6C-210ENST00000621728 GEMIN7Q9H840 131 aaKnown RBP12.6□□□□□ -0.39
SEMA6C-210ENST00000621728 REG3AQ06141 175 aa12.6□□□□□ -0.39
SEMA6C-210ENST00000621728 CDKN2A-AS1Q9UH64 79 aa12.6□□□□□ -0.39
SEMA6C-210ENST00000621728 KLK5Q9Y337 293 aaPredicted RBP12.6□□□□□ -0.39
SEMA6C-210ENST00000621728 IGLV10-54A0A075B6I4 117 aa12.59□□□□□ -0.39
SEMA6C-210ENST00000621728 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
SEMA6C-210ENST00000621728 IGLV5-45A0A087WSX0 123 aa12.59□□□□□ -0.39
SEMA6C-210ENST00000621728 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.58□□□□□ -0.4
SEMA6C-210ENST00000621728 ENHOQ6UWT2 76 aa12.58□□□□□ -0.4
SEMA6C-210ENST00000621728 DNAH1Q9P2D7 4330 aa12.57□□□□□ -0.4
SEMA6C-210ENST00000621728 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
SEMA6C-210ENST00000621728 LINC01556Q5JQF7 62 aa12.57□□□□□ -0.4
SEMA6C-210ENST00000621728 A0A0B4J2C4 111 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 A0A0J9YXY3 114 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 TSPAN13O95857 204 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 XCL1P47992 114 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 C10orf126Q8N4M7 172 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 TRAV8-3A0A0A6YYJ7 113 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 TIMM17BO60830 172 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 CFC1BP0CG36 223 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 CFC1P0CG37 223 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 DNAH10OSP0CZ25 163 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms