RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 MIR7-3HGQ8N6C7 128 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 TOMM6Q96B49 74 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 DAZ2Q13117 558 aaKnown RBP6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 DAZ4Q86SG3 579 aaKnown RBP6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 DAZ3Q9NR90 486 aaKnown RBP6.11□□□□□ -1.43
PTPDC1-204ENST00000620992 KMT2BQ9UMN6 2715 aaPredicted RBP6.1□□□□□ -1.43
PTPDC1-204ENST00000620992 MUSTN1Q8IVN3 82 aa6.1□□□□□ -1.43
PTPDC1-204ENST00000620992 NTN5Q8WTR8 489 aaPredicted RBP6.1□□□□□ -1.43
PTPDC1-204ENST00000620992 CLUHP3Q96NS8 147 aa6.1□□□□□ -1.43
PTPDC1-204ENST00000620992 HILS1P60008 231 aa6.1□□□□□ -1.43
PTPDC1-204ENST00000620992 NANOS2P60321 138 aaKnown RBP6.1□□□□□ -1.43
PTPDC1-204ENST00000620992 RNASE3P12724 160 aaKnown RBP6.1□□□□□ -1.43
PTPDC1-204ENST00000620992 NEXN-AS1Q8NBZ9 246 aa6.1□□□□□ -1.43
PTPDC1-204ENST00000620992 NDUFA1O15239 70 aa6.09□□□□□ -1.43
PTPDC1-204ENST00000620992 CRYGDP07320 174 aa6.09□□□□□ -1.43
PTPDC1-204ENST00000620992 SPANXA1Q9NS26 97 aa6.09□□□□□ -1.43
PTPDC1-204ENST00000620992 A0A087WZ39 114 aa6.09□□□□□ -1.43
PTPDC1-204ENST00000620992 A8MZ25 164 aa6.09□□□□□ -1.43
PTPDC1-204ENST00000620992 DSCR8Q96T75 97 aa6.09□□□□□ -1.43
PTPDC1-204ENST00000620992 FLG2Q5D862 2391 aaPredicted RBP6.09□□□□□ -1.43
PTPDC1-204ENST00000620992 E9PLD3 99 aa6.09□□□□□ -1.43
PTPDC1-204ENST00000620992 PSMB8P28062 276 aa6.09□□□□□ -1.44
PTPDC1-204ENST00000620992 LINC00467Q9BRT7 94 aa6.08□□□□□ -1.44
PTPDC1-204ENST00000620992 CDKN2A-AS1Q9UH64 79 aa6.08□□□□□ -1.44
PTPDC1-204ENST00000620992 IGHV4-30-4P0DP06 118 aa6.08□□□□□ -1.44
PTPDC1-204ENST00000620992 REG3AQ06141 175 aa6.08□□□□□ -1.44
PTPDC1-204ENST00000620992 C15orf53Q8NAA6 179 aa6.08□□□□□ -1.44
PTPDC1-204ENST00000620992 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
PTPDC1-204ENST00000620992 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 CFC1P0CG37 223 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 KLK9Q2XQG4 91 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 TRAV13-2A0A0B4J235 113 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 BAALC-AS2P0C853 105 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 CRYBA4P53673 196 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 VPS13CQ709C8 3753 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 F8W1H4 67 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 UBL5Q9BZL1 73 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 RNF152Q8N8N0 203 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 DCANP1Q8TF63 244 aa6.07□□□□□ -1.44
PTPDC1-204ENST00000620992 A0A0J9YWU9 116 aa6.06□□□□□ -1.44
PTPDC1-204ENST00000620992 SPATA25Q9BR10 227 aa6.06□□□□□ -1.44
PTPDC1-204ENST00000620992 TRACP01848 142 aa6.06□□□□□ -1.44
PTPDC1-204ENST00000620992 KPRPQ5T749 579 aaPredicted RBP6.06□□□□□ -1.44
PTPDC1-204ENST00000620992 PPDPFQ9H3Y8 114 aa6.06□□□□□ -1.44
PTPDC1-204ENST00000620992 C4orf48Q5BLP8 95 aa6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 C9orf153Q5TBE3 101 aa6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 FAM19A5Q7Z5A7 132 aaPredicted RBP6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 CHCHD10Q8WYQ3 142 aaPredicted RBP6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 RBMY1FQ15415 496 aaKnown RBP6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 CLEC2BQ92478 149 aa6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 NBEAL2Q6ZNJ1 2754 aa6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 CRYBG3Q68DQ2 2970 aa6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 TRBV10-1A0A0K0K1A3 114 aa6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 MED14OSP0DP75 135 aa6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 CRIP2P52943 208 aaPredicted RBP6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 SPANXB1Q9NS25 103 aaPredicted RBP6.05□□□□□ -1.44
PTPDC1-204ENST00000620992 IGKV2-28A0A075B6P5 120 aa6.04□□□□□ -1.44
PTPDC1-204ENST00000620992 IGKV2D-28P01615 120 aa6.04□□□□□ -1.44
PTPDC1-204ENST00000620992 PIK3CD-AS1Q5SR53 167 aa6.04□□□□□ -1.44
PTPDC1-204ENST00000620992 C9orf85Q96MD7 179 aa6.04□□□□□ -1.44
PTPDC1-204ENST00000620992 KLLNB2CW77 178 aa6.04□□□□□ -1.44
PTPDC1-204ENST00000620992 IGKV3D-7A0A0C4DH55 119 aa6.04□□□□□ -1.44
PTPDC1-204ENST00000620992 NDUFA7O95182 113 aa6.04□□□□□ -1.44
PTPDC1-204ENST00000620992 TSHBP01222 138 aa6.04□□□□□ -1.44
PTPDC1-204ENST00000620992 FAM19A4Q96LR4 140 aa6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 POLR2KP53803 58 aaKnown RBP6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 LINC00315P59091 139 aa6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 ODF3L2Q3SX64 289 aa6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 PTH2Q96A98 100 aa6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 KIF25-AS1Q9Y6Z4 181 aa6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 IGLV1-40P01703 118 aa6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 SS18L2Q9UHA2 77 aa6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 ITPR1Q14643 2758 aa6.03□□□□□ -1.44
PTPDC1-204ENST00000620992 IGLV4-69A0A075B6H9 119 aa6.02□□□□□ -1.44
PTPDC1-204ENST00000620992 IGIPA6NJ69 53 aa6.02□□□□□ -1.44
PTPDC1-204ENST00000620992 INAFM2P0DMQ5 153 aa6.02□□□□□ -1.44
PTPDC1-204ENST00000620992 CELSR2Q9HCU4 2923 aa6.02□□□□□ -1.45
PTPDC1-204ENST00000620992 CFAP126Q5VTH2 177 aa6.02□□□□□ -1.45
PTPDC1-204ENST00000620992 TRBV20-1A0A075B6N2 111 aa6.02□□□□□ -1.45
PTPDC1-204ENST00000620992 TSPEAR-AS2P59090 65 aa6.02□□□□□ -1.45
PTPDC1-204ENST00000620992 ZANQ9Y493 2812 aa6.02□□□□□ -1.45
PTPDC1-204ENST00000620992 SLPIP03973 132 aa6.02□□□□□ -1.45
PTPDC1-204ENST00000620992 LGALS9O00182 355 aa6.01□□□□□ -1.45
PTPDC1-204ENST00000620992 OVOL2Q9BRP0 275 aa6.01□□□□□ -1.45
PTPDC1-204ENST00000620992 SPINK6Q6UWN8 80 aa6.01□□□□□ -1.45
PTPDC1-204ENST00000620992 ORMDL1Q9P0S3 153 aa6.01□□□□□ -1.45
PTPDC1-204ENST00000620992 TRBV6-8A0A0A6YYG3 113 aa6□□□□□ -1.45
PTPDC1-204ENST00000620992 M0QY20 66 aa6□□□□□ -1.45
PTPDC1-204ENST00000620992 FUSP35637 526 aaKnown RBP eCLIP6□□□□□ -1.45
PTPDC1-204ENST00000620992 HERV-K104P63124 156 aa6□□□□□ -1.45
PTPDC1-204ENST00000620992 Q6ZTC4 211 aa6□□□□□ -1.45
PTPDC1-204ENST00000620992 TRBV27A0A0K0K1C4 114 aa6□□□□□ -1.45
PTPDC1-204ENST00000620992 MIFP14174 115 aa6□□□□□ -1.45
PTPDC1-204ENST00000620992 FAM19A1Q7Z5A9 133 aa6□□□□□ -1.45
PTPDC1-204ENST00000620992 RPL37AP8A6NKH3 93 aa5.99□□□□□ -1.45
PTPDC1-204ENST00000620992 H0Y9J4 135 aa5.99□□□□□ -1.45
PTPDC1-204ENST00000620992 UBE2D1P51668 147 aa5.99□□□□□ -1.45
PTPDC1-204ENST00000620992 LYRM9A8MSI8 78 aa5.99□□□□□ -1.45
PTPDC1-204ENST00000620992 HRCT1Q6UXD1 115 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms