RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 SPATA45Q537H7 98 aa10.84□□□□□ -0.67
CD40-207ENST00000620709 ZC2HC1BQ5TFG8 222 aa10.84□□□□□ -0.67
CD40-207ENST00000620709 Q6ZUT4 128 aa10.84□□□□□ -0.67
CD40-207ENST00000620709 OR5A1Q8NGJ0 315 aa10.84□□□□□ -0.67
CD40-207ENST00000620709 FAM104AQ969W3 186 aa10.84□□□□□ -0.67
CD40-207ENST00000620709 TMEM101Q96IK0 257 aa10.84□□□□□ -0.67
CD40-207ENST00000620709 hDV102S1A0JD36 115 aa10.83□□□□□ -0.68
CD40-207ENST00000620709 PSCAO43653 123 aa10.83□□□□□ -0.68
CD40-207ENST00000620709 PKIAP61925 76 aa10.83□□□□□ -0.68
CD40-207ENST00000620709 GAGE6Q13070 117 aa10.83□□□□□ -0.68
CD40-207ENST00000620709 MAJINQ3KP22 176 aa10.83□□□□□ -0.68
CD40-207ENST00000620709 C2orf88Q9BSF0 95 aa10.83□□□□□ -0.68
CD40-207ENST00000620709 TSTD3H0UI37 97 aa10.82□□□□□ -0.68
CD40-207ENST00000620709 C10orf126Q8N4M7 172 aa10.82□□□□□ -0.68
CD40-207ENST00000620709 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
CD40-207ENST00000620709 K7EP13 123 aa10.81□□□□□ -0.68
CD40-207ENST00000620709 TIRAPP58753 221 aa10.81□□□□□ -0.68
CD40-207ENST00000620709 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
CD40-207ENST00000620709 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
CD40-207ENST00000620709 IGHV3-30P01768 117 aa10.8□□□□□ -0.68
CD40-207ENST00000620709 IGHV3-33P01772 117 aa10.8□□□□□ -0.68
CD40-207ENST00000620709 IGHV3-30-3P0DP02 117 aa10.8□□□□□ -0.68
CD40-207ENST00000620709 IGHV3-30-5P0DP03 117 aa10.8□□□□□ -0.68
CD40-207ENST00000620709 LELP1Q5T871 98 aa10.8□□□□□ -0.68
CD40-207ENST00000620709 PRO1933Q9H354 126 aa10.8□□□□□ -0.68
CD40-207ENST00000620709 Q9HAA7 133 aa10.8□□□□□ -0.68
CD40-207ENST00000620709 CDC42SE2Q9NRR3 84 aa10.79□□□□□ -0.68
CD40-207ENST00000620709 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
CD40-207ENST00000620709 C11orf86A6NJI1 115 aa10.78□□□□□ -0.68
CD40-207ENST00000620709 EPM2AB3EWF7 344 aa10.78□□□□□ -0.68
CD40-207ENST00000620709 TMEM262E9PQX1 116 aa10.78□□□□□ -0.68
CD40-207ENST00000620709 KRTAP10-1P60331 282 aa10.78□□□□□ -0.68
CD40-207ENST00000620709 STPG4Q8N801 248 aa10.78□□□□□ -0.68
CD40-207ENST00000620709 CHAC1Q9BUX1 264 aa10.78□□□□□ -0.68
CD40-207ENST00000620709 A0A1B0GUV1 79 aa10.77□□□□□ -0.69
CD40-207ENST00000620709 PCP4L1A6NKN8 68 aa10.77□□□□□ -0.69
CD40-207ENST00000620709 LINC01556Q5JQF7 62 aa10.77□□□□□ -0.69
CD40-207ENST00000620709 IGLV4-60A0A075B6I1 120 aa10.76□□□□□ -0.69
CD40-207ENST00000620709 A0A0J9YXV3 536 aa10.76□□□□□ -0.69
CD40-207ENST00000620709 GCSHP23434 173 aa10.76□□□□□ -0.69
CD40-207ENST00000620709 UBE2D1P51668 147 aa10.76□□□□□ -0.69
CD40-207ENST00000620709 ANKRD39Q53RE8 183 aa10.76□□□□□ -0.69
CD40-207ENST00000620709 FAT1Q14517 4588 aa10.76□□□□□ -0.69
CD40-207ENST00000620709 XGP55808 180 aa10.75□□□□□ -0.69
CD40-207ENST00000620709 RBX1P62877 108 aa10.75□□□□□ -0.69
CD40-207ENST00000620709 MPV17L2Q567V2 206 aa10.75□□□□□ -0.69
CD40-207ENST00000620709 IGLV5-52A0A0A0MRZ9 124 aa10.74□□□□□ -0.69
CD40-207ENST00000620709 TINCRA0A1B0GVN0 87 aa10.74□□□□□ -0.69
CD40-207ENST00000620709 IBA57-AS1B1ANH7 110 aa10.74□□□□□ -0.69
CD40-207ENST00000620709 HERVK_113P61574 105 aa10.74□□□□□ -0.69
CD40-207ENST00000620709 SEC11AP67812 179 aa10.74□□□□□ -0.69
CD40-207ENST00000620709 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
CD40-207ENST00000620709 TRAV13-1A0A0B4J241 112 aa10.73□□□□□ -0.69
CD40-207ENST00000620709 ZNF22P17026 224 aaPredicted RBP10.73□□□□□ -0.69
CD40-207ENST00000620709 HAMPP81172 84 aa10.73□□□□□ -0.69
CD40-207ENST00000620709 FAM19A3Q7Z5A8 133 aa10.73□□□□□ -0.69
CD40-207ENST00000620709 C14orf144Q96I85 54 aa10.73□□□□□ -0.69
CD40-207ENST00000620709 MIEN1Q9BRT3 115 aa10.73□□□□□ -0.69
CD40-207ENST00000620709 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
CD40-207ENST00000620709 UQCR10Q9UDW1 63 aa10.73□□□□□ -0.69
CD40-207ENST00000620709 SMR3BP02814 79 aaPredicted RBP10.72□□□□□ -0.69
CD40-207ENST00000620709 NMUP48645 174 aa10.72□□□□□ -0.69
CD40-207ENST00000620709 Q8N3U1 123 aa10.72□□□□□ -0.69
CD40-207ENST00000620709 LRCOL1A6NCL2 159 aa10.71□□□□□ -0.69
CD40-207ENST00000620709 COX8AP10176 69 aa10.71□□□□□ -0.69
CD40-207ENST00000620709 DDTP30046 118 aa10.71□□□□□ -0.69
CD40-207ENST00000620709 HERVK_113P63121 156 aa10.71□□□□□ -0.69
CD40-207ENST00000620709 E9PLD3 99 aa10.7□□□□□ -0.7
CD40-207ENST00000620709 INAFM2P0DMQ5 153 aa10.7□□□□□ -0.7
CD40-207ENST00000620709 LINC00242Q5T6M2 205 aa10.7□□□□□ -0.7
CD40-207ENST00000620709 Q5VSD8 79 aa10.7□□□□□ -0.7
CD40-207ENST00000620709 SLC25A34Q6PIV7 304 aa10.7□□□□□ -0.7
CD40-207ENST00000620709 LINC00469Q8N7U9 141 aa10.7□□□□□ -0.7
CD40-207ENST00000620709 IGLV5-45A0A087WSX0 123 aa10.69□□□□□ -0.7
CD40-207ENST00000620709 IGKV2D-26A0A0A0MRZ7 120 aa10.69□□□□□ -0.7
CD40-207ENST00000620709 ANGP03950 147 aaKnown RBP10.69□□□□□ -0.7
CD40-207ENST00000620709 Q8N814 137 aa10.69□□□□□ -0.7
CD40-207ENST00000620709 VPS13BQ7Z7G8 4022 aa10.69□□□□□ -0.7
CD40-207ENST00000620709 IGKV3OR2-268A0A0C4DH90 116 aa10.68□□□□□ -0.7
CD40-207ENST00000620709 TMEM223A0PJW6 202 aa10.68□□□□□ -0.7
CD40-207ENST00000620709 TM2D2Q9BX73 214 aa10.68□□□□□ -0.7
CD40-207ENST00000620709 H3BRM9 83 aa10.68□□□□□ -0.7
CD40-207ENST00000620709 NTN5Q8WTR8 489 aaPredicted RBP10.68□□□□□ -0.7
CD40-207ENST00000620709 LINC00959A0A1B0GUT2 108 aa10.67□□□□□ -0.7
CD40-207ENST00000620709 LECT2O14960 151 aa10.67□□□□□ -0.7
CD40-207ENST00000620709 CCL25O15444 150 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 DLEU1O43261 78 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 COX6A2Q02221 97 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 SS18Q15532 418 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 PCP2Q8IVA1 136 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 BOD1L2Q8IYS8 172 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 LINC00269Q8N2A0 174 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 CDKN2A-AS1Q9UH64 79 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 DNAH8Q96JB1 4490 aa10.66□□□□□ -0.7
CD40-207ENST00000620709 HNRNPA3P51991 378 aaKnown RBP10.65□□□□□ -0.7
CD40-207ENST00000620709 REG3AQ06141 175 aa10.65□□□□□ -0.7
CD40-207ENST00000620709 CLPSL2Q6UWE3 100 aa10.65□□□□□ -0.7
CD40-207ENST00000620709 TRAV8-3A0A0A6YYJ7 113 aa10.64□□□□□ -0.71
CD40-207ENST00000620709 FAM229AH3BQW9 127 aa10.64□□□□□ -0.71
CD40-207ENST00000620709 LEPROTO15243 131 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms