RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TRBV7-7A0A0K0K1E9 115 aa14.44□□□□□ -0.1
NEK3-208ENST00000618534 ZNF462Q96JM2 2506 aa14.43□□□□□ -0.1
NEK3-208ENST00000618534 DEFB113Q30KQ7 82 aa14.43□□□□□ -0.1
NEK3-208ENST00000618534 ZFYVE26Q68DK2 2539 aa14.42□□□□□ -0.1
NEK3-208ENST00000618534 CCL24O00175 119 aa14.42□□□□□ -0.1
NEK3-208ENST00000618534 BAALC-AS2P0C853 105 aa14.42□□□□□ -0.1
NEK3-208ENST00000618534 GIG44P09565 113 aaPredicted RBP14.42□□□□□ -0.1
NEK3-208ENST00000618534 C22orf24Q9Y442 160 aa14.42□□□□□ -0.1
NEK3-208ENST00000618534 ACYP1P07311 99 aa14.41□□□□□ -0.1
NEK3-208ENST00000618534 PLAC8L1A1L4L8 177 aa14.41□□□□□ -0.1
NEK3-208ENST00000618534 SMCR5Q8TEV8 140 aa14.41□□□□□ -0.1
NEK3-208ENST00000618534 SONP18583 2426 aaKnown RBP14.41□□□□□ -0.1
NEK3-208ENST00000618534 TRGV2A0A075B6R0 118 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 COX7B2Q8TF08 81 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 WFDC10AQ9H1F0 79 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 JMJD1CQ15652 2540 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 IGKV3OR2-268A0A0C4DH90 116 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 MIR7-3HGQ8N6C7 128 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 CHCHD5Q9BSY4 110 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 PPDPFQ9H3Y8 114 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 TOMM7Q9P0U1 55 aa14.4□□□□□ -0.1
NEK3-208ENST00000618534 SETXQ7Z333 2677 aaKnown RBP14.39□□□□□ -0.11
NEK3-208ENST00000618534 HIST2H2BCQ6DN03 193 aa14.39□□□□□ -0.11
NEK3-208ENST00000618534 ZNF469Q96JG9 3925 aaPredicted RBP14.39□□□□□ -0.11
NEK3-208ENST00000618534 DNAJC9-AS1A6NH13 148 aa14.39□□□□□ -0.11
NEK3-208ENST00000618534 LINC00337Q8N6G1 96 aa14.39□□□□□ -0.11
NEK3-208ENST00000618534 CRPP02741 224 aa14.38□□□□□ -0.11
NEK3-208ENST00000618534 Q9HAA7 133 aa14.38□□□□□ -0.11
NEK3-208ENST00000618534 NF1P21359 2839 aa14.38□□□□□ -0.11
NEK3-208ENST00000618534 TRAV13-2A0A0B4J235 113 aa14.37□□□□□ -0.11
NEK3-208ENST00000618534 TMEM86BQ8N661 226 aa14.37□□□□□ -0.11
NEK3-208ENST00000618534 IGKV2-28A0A075B6P5 120 aa14.37□□□□□ -0.11
NEK3-208ENST00000618534 IGKV2D-28P01615 120 aa14.37□□□□□ -0.11
NEK3-208ENST00000618534 RPL28P46779 137 aaKnown RBP14.37□□□□□ -0.11
NEK3-208ENST00000618534 C16orf74Q96GX8 76 aa14.37□□□□□ -0.11
NEK3-208ENST00000618534 NIPBLQ6KC79 2804 aaeCLIP14.37□□□□□ -0.11
NEK3-208ENST00000618534 PLA2G2AP14555 144 aa14.36□□□□□ -0.11
NEK3-208ENST00000618534 RPL35AP18077 110 aaKnown RBP14.36□□□□□ -0.11
NEK3-208ENST00000618534 FAM222AQ5U5X8 452 aa14.36□□□□□ -0.11
NEK3-208ENST00000618534 SND1-IT1Q9HBX3 110 aa14.36□□□□□ -0.11
NEK3-208ENST00000618534 IGLV4-60A0A075B6I1 120 aa14.35□□□□□ -0.11
NEK3-208ENST00000618534 PF4P02776 101 aa14.35□□□□□ -0.11
NEK3-208ENST00000618534 TRBV6-4A0A1B0GX49 114 aa14.35□□□□□ -0.11
NEK3-208ENST00000618534 KRTAP1-3Q8IUG1 177 aa14.35□□□□□ -0.11
NEK3-208ENST00000618534 UBR5O95071 2799 aaPredicted RBP14.34□□□□□ -0.11
NEK3-208ENST00000618534 TRGV4A0A0C4DH28 118 aa14.34□□□□□ -0.11
NEK3-208ENST00000618534 LRRC75A-AS1Q8N1F1 130 aa14.34□□□□□ -0.11
NEK3-208ENST00000618534 FAM236AA0A1B0GUQ0 79 aa14.33□□□□□ -0.12
NEK3-208ENST00000618534 FAM236BA0A1B0GV22 79 aa14.33□□□□□ -0.12
NEK3-208ENST00000618534 LINC00158P58513 81 aa14.33□□□□□ -0.12
NEK3-208ENST00000618534 ESM1Q9NQ30 184 aa14.33□□□□□ -0.12
NEK3-208ENST00000618534 LINC00643Q86TS7 51 aa14.33□□□□□ -0.12
NEK3-208ENST00000618534 SETD2Q9BYW2 2564 aaPredicted RBP14.32□□□□□ -0.12
NEK3-208ENST00000618534 MALP21145 153 aa14.32□□□□□ -0.12
NEK3-208ENST00000618534 IMUPQ9GZP8 106 aa14.32□□□□□ -0.12
NEK3-208ENST00000618534 ITPR3Q14573 2671 aa14.31□□□□□ -0.12
NEK3-208ENST00000618534 SMIM11BQ8TCY0 68 aa14.31□□□□□ -0.12
NEK3-208ENST00000618534 IGHV3OR16-9A0A0B4J2B5 98 aa14.31□□□□□ -0.12
NEK3-208ENST00000618534 SDIM1Q6ZPB5 146 aa14.31□□□□□ -0.12
NEK3-208ENST00000618534 A0A087WYN8 130 aa14.3□□□□□ -0.12
NEK3-208ENST00000618534 TRBV6-8A0A0A6YYG3 113 aa14.3□□□□□ -0.12
NEK3-208ENST00000618534 CCL18P55774 89 aa14.3□□□□□ -0.12
NEK3-208ENST00000618534 OVOL2Q9BRP0 275 aa14.3□□□□□ -0.12
NEK3-208ENST00000618534 SVIPQ8NHG7 77 aa14.3□□□□□ -0.12
NEK3-208ENST00000618534 BBC3Q96PG8 261 aaPredicted RBP14.3□□□□□ -0.12
NEK3-208ENST00000618534 INAFM2P0DMQ5 153 aa14.29□□□□□ -0.12
NEK3-208ENST00000618534 GAGE2AQ6NT46 116 aa14.29□□□□□ -0.12
NEK3-208ENST00000618534 CSNK1G2-AS1Q8NCQ2 148 aa14.29□□□□□ -0.12
NEK3-208ENST00000618534 C19orf73Q9NVV2 129 aa14.29□□□□□ -0.12
NEK3-208ENST00000618534 FHL2Q14192 279 aa14.29□□□□□ -0.12
NEK3-208ENST00000618534 C5orf38Q86SI9 138 aa14.28□□□□□ -0.12
NEK3-208ENST00000618534 NBPF19A0A087WUL8 3843 aa14.28□□□□□ -0.12
NEK3-208ENST00000618534 USP24Q9UPU5 2620 aa14.28□□□□□ -0.12
NEK3-208ENST00000618534 PFN2P35080 140 aa14.27□□□□□ -0.12
NEK3-208ENST00000618534 APCP25054 2843 aa14.27□□□□□ -0.12
NEK3-208ENST00000618534 CMC4P56277 68 aaPredicted RBP14.27□□□□□ -0.13
NEK3-208ENST00000618534 A0A087WZ39 114 aa14.26□□□□□ -0.13
NEK3-208ENST00000618534 DNAL4O96015 105 aa14.26□□□□□ -0.13
NEK3-208ENST00000618534 IBA57-AS1B1ANH7 110 aa14.25□□□□□ -0.13
NEK3-208ENST00000618534 C9orf129Q5T035 196 aaKnown RBP14.25□□□□□ -0.13
NEK3-208ENST00000618534 C3orf56Q8N813 242 aa14.24□□□□□ -0.13
NEK3-208ENST00000618534 WFDC11Q8NEX6 87 aa14.24□□□□□ -0.13
NEK3-208ENST00000618534 CCDC168Q8NDH2 2452 aa14.24□□□□□ -0.13
NEK3-208ENST00000618534 IGLV1-51P01701 117 aa14.24□□□□□ -0.13
NEK3-208ENST00000618534 ATP5G1P05496 136 aa14.24□□□□□ -0.13
NEK3-208ENST00000618534 C11orf68Q9H3H3 251 aaKnown RBP14.24□□□□□ -0.13
NEK3-208ENST00000618534 PAX4O43316 350 aa14.22□□□□□ -0.13
NEK3-208ENST00000618534 LINC01006Q8NI28 216 aa14.22□□□□□ -0.13
NEK3-208ENST00000618534 LINC00959A0A1B0GUT2 108 aa14.22□□□□□ -0.13
NEK3-208ENST00000618534 FAM110AQ9BQ89 295 aa14.22□□□□□ -0.13
NEK3-208ENST00000618534 FLNAP21333 2647 aaKnown RBP14.21□□□□□ -0.13
NEK3-208ENST00000618534 H0YGX0 51 aa14.21□□□□□ -0.13
NEK3-208ENST00000618534 C14orf132Q9NPU4 83 aa14.21□□□□□ -0.14
NEK3-208ENST00000618534 LECT2O14960 151 aa14.2□□□□□ -0.14
NEK3-208ENST00000618534 OR13C6PQ8NH95 151 aa14.2□□□□□ -0.14
NEK3-208ENST00000618534 DEFB130BP0DP73 79 aa14.2□□□□□ -0.14
NEK3-208ENST00000618534 DEFB130AP0DP74 79 aa14.2□□□□□ -0.14
NEK3-208ENST00000618534 ZNF843Q8N446 348 aa14.2□□□□□ -0.14
NEK3-208ENST00000618534 CXCL5P42830 114 aa14.19□□□□□ -0.14
NEK3-208ENST00000618534 SMIM20Q8N5G0 67 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms