RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 POLR2KP53803 58 aaKnown RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 MAGOHP61326 146 aaKnown RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 ATP6V0D1P61421 351 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 YWHAEP62258 255 aaKnown RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 HPCAP84074 193 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 STK4Q13043 487 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 TAF7Q15545 349 aaPredicted RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 RRN3P1Q2M238 152 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 KRBOX4Q5JUW0 171 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 C9orf153Q5TBE3 101 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 SYCE1Q8N0S2 351 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 MAGOHBQ96A72 148 aaKnown RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 MYCBPQ99417 103 aaPredicted RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 POLE4Q9NR33 117 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 AGPAT3Q9NRZ7 376 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 CHCHD3Q9NX63 227 aaKnown RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 PRNDQ9UKY0 176 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 MRPS7Q9Y2R9 242 aaKnown RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 TMEM56-RWDD3S4R434 201 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 DAPK1P53355 1430 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 IFT140Q96RY7 1462 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 ROCK2O75116 1388 aaKnown RBP-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 OVOS2A0A0G2JMS6 1433 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 PIK3C2GO75747 1445 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 NCAPD2Q15021 1401 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 MAP1LC3B2A6NCE7 125 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 OOSP1A8MZH6 123 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 C5orf58C9J3I9 102 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 H0Y9P7 68 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 TMEM256-PLSCR3K7ERE1 68 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 CXCL11O14625 94 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 HBDP02042 147 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 TTRP02766 147 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 IFNW1P05000 195 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 CRYGCP07315 174 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 ANXA5P08758 320 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 SETSIPP0DME0 302 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 TPT1P13693 172 aaKnown RBP-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 CXCL3P19876 107 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 HSD11B1P28845 292 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 UBE2G1P62253 170 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 RPL31P62899 125 aaKnown RBP-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 PLGLB1Q02325 96 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 Q3ZCU0 254 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 PPP1R42Q7Z4L9 355 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 RHPN1-AS1Q9BWJ2 59 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 DYNLRB1Q9NP97 96 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 PRTFDC1Q9NRG1 225 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 AP4S1Q9Y587 144 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 FOCADQ5VW36 1801 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 ADGBQ8N7X0 1667 aa-1.96□□□□□ -2.72
SOX2-OT-236ENST00000616401 ANKRD36BQ8N2N9 1353 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 INO80Q9ULG1 1556 aaPredicted RBP-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 SCRIBQ14160 1630 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 MADDQ8WXG6 1647 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 TRBV19A0A075B6N1 114 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 TRAV26-1A0A087WT03 109 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 A0A1B0GV50 99 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 A6NIN4 97 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 H3BQF6 201 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 ARPC3O15145 178 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 ATG12O94817 140 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 MYL2P10916 166 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 ARF4P18085 180 aaPredicted RBP-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 RPL12P30050 165 aaKnown RBP-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 ARPP19P56211 112 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 MYL6P60660 151 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 DSTNP60981 165 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 BLCAPP62952 87 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 MINOS1Q5TGZ0 78 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 RESP18Q5W5W9 173 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 TTC23Q5W5X9 447 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 NCBP2-AS2Q69YL0 99 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 MRPL54Q6P161 138 aaKnown RBP-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 BLOC1S2Q6QNY1 142 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 UQCC3Q6UW78 93 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 MUSTN1Q8IVN3 82 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 KCNRGQ8N5I3 272 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 OR51A7Q8NH64 312 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 OTOSQ8NHW6 89 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 OR8D1Q8WZ84 308 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 ATP6V1E2Q96A05 226 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 ISOC2Q96AB3 205 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 FER1L6-AS2Q96M78 137 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 BEX1Q9HBH7 125 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 RAB18Q9NP72 206 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 PFDN4Q9NQP4 134 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 ZC4H2Q9NQZ6 224 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 COMMD8Q9NX08 183 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 CHMP2BQ9UQN3 213 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 TMEM98Q9Y2Y6 226 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 TCOF1Q13428 1488 aaKnown RBP-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 ZNF518AQ6AHZ1 1483 aa-1.97□□□□□ -2.72
SOX2-OT-236ENST00000616401 DLC1Q96QB1 1528 aa-1.97□□□□□ -2.73
SOX2-OT-236ENST00000616401 SYNJ2BP-COX16A0A087WUM0 186 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 A0A1B0GWA3 101 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 H3BMG7 143 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 K7EPI3 171 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 K7ERJ3 54 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms