RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 FHITP49789 147 aa3.75□□□□□ -1.81
MUC1-227ENST00000615517 FOXA3P55318 350 aaPredicted RBP3.75□□□□□ -1.81
MUC1-227ENST00000615517 PCOTHQ58A44 107 aa3.75□□□□□ -1.81
MUC1-227ENST00000615517 CST9LP1Q5W188 147 aa3.75□□□□□ -1.81
MUC1-227ENST00000615517 SPAG11AQ6PDA7 123 aa3.75□□□□□ -1.81
MUC1-227ENST00000615517 STOML3Q8TAV4 291 aa3.75□□□□□ -1.81
MUC1-227ENST00000615517 MRAP2Q96G30 205 aa3.75□□□□□ -1.81
MUC1-227ENST00000615517 TCEAL7Q9BRU2 100 aa3.75□□□□□ -1.81
MUC1-227ENST00000615517 IGHV3OR16-9A0A0B4J2B5 98 aa3.74□□□□□ -1.81
MUC1-227ENST00000615517 A0A1B0GVG6 124 aa3.74□□□□□ -1.81
MUC1-227ENST00000615517 LBHQ53QV2 105 aaPredicted RBP3.74□□□□□ -1.81
MUC1-227ENST00000615517 C2orf82Q6UX34 121 aa3.74□□□□□ -1.81
MUC1-227ENST00000615517 LINC00469Q8N7U9 141 aa3.74□□□□□ -1.81
MUC1-227ENST00000615517 DAND5Q8N907 189 aa3.74□□□□□ -1.81
MUC1-227ENST00000615517 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
MUC1-227ENST00000615517 CYTL1Q9NRR1 136 aa3.74□□□□□ -1.81
MUC1-227ENST00000615517 UBE2D4Q9Y2X8 147 aa3.74□□□□□ -1.81
MUC1-227ENST00000615517 TRBV6-5A0A0K0K1A5 114 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 TRBV30A0A0K0K1B3 111 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 RPL37AP8A6NKH3 93 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 F2Z2F3 143 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 PAGE4O60829 102 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 NOL3O60936 208 aaKnown RBP3.73□□□□□ -1.81
MUC1-227ENST00000615517 UPK1BO75841 260 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 S100A9P06702 114 aaKnown RBP3.73□□□□□ -1.81
MUC1-227ENST00000615517 PET100P0DJ07 73 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 RPS20P60866 119 aaKnown RBP3.73□□□□□ -1.81
MUC1-227ENST00000615517 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 Q6ZUT4 128 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 MRPL55Q7Z7F7 128 aaKnown RBP3.73□□□□□ -1.81
MUC1-227ENST00000615517 FAM104AQ969W3 186 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 PACRGQ96M98 296 aaPredicted RBP3.73□□□□□ -1.81
MUC1-227ENST00000615517 LINC00167Q96N53 147 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 KRTAP9-8Q9BYQ0 159 aa3.73□□□□□ -1.81
MUC1-227ENST00000615517 C7orf77A4D0Y5 90 aa3.72□□□□□ -1.81
MUC1-227ENST00000615517 PCP4P48539 62 aa3.72□□□□□ -1.81
MUC1-227ENST00000615517 POLR2KP53803 58 aaKnown RBP3.72□□□□□ -1.81
MUC1-227ENST00000615517 TWIST1Q15672 202 aa3.72□□□□□ -1.81
MUC1-227ENST00000615517 MARVELD1Q9BSK0 173 aa3.72□□□□□ -1.81
MUC1-227ENST00000615517 XAGE1AQ9HD64 81 aa3.72□□□□□ -1.81
MUC1-227ENST00000615517 TP73-AS1Q9UF72 201 aa3.72□□□□□ -1.81
MUC1-227ENST00000615517 CSDC2Q9Y534 153 aaKnown RBP3.72□□□□□ -1.81
MUC1-227ENST00000615517 FAM240BA0A1B0GVZ2 78 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 MAP1LC3B2A6NCE7 125 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 ZNF727A8MUV8 499 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 UBE2AP49459 152 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 TMUB2Q71RG4 321 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 C9orf62Q8N4C0 152 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 KIR2DL4Q99706 377 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 CNFNQ9BYD5 112 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 MAP1LC3BQ9GZQ8 125 aa3.71□□□□□ -1.82
MUC1-227ENST00000615517 TRBV27A0A0K0K1C4 114 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 IFNA1P01562 189 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 CFC1P0CG37 223 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 RPL35P42766 123 aaKnown RBP3.7□□□□□ -1.82
MUC1-227ENST00000615517 PRLHP81277 87 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 RPL7L1Q6DKI1 246 aaKnown RBP3.7□□□□□ -1.82
MUC1-227ENST00000615517 COX6B2Q6YFQ2 88 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 Q8NBF4 154 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 PLEKHB2Q96CS7 222 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 CCDC32Q9BV29 185 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 ST20Q9HBF5 79 aa3.7□□□□□ -1.82
MUC1-227ENST00000615517 C9orf118A6NHY6 69 aa3.69□□□□□ -1.82
MUC1-227ENST00000615517 PNRC1Q12796 327 aaPredicted RBP3.69□□□□□ -1.82
MUC1-227ENST00000615517 TEX261Q6UWH6 196 aa3.69□□□□□ -1.82
MUC1-227ENST00000615517 Q8N377 158 aa3.69□□□□□ -1.82
MUC1-227ENST00000615517 SPINK1P00995 79 aa3.68□□□□□ -1.82
MUC1-227ENST00000615517 RPL32P62910 135 aaKnown RBP3.68□□□□□ -1.82
MUC1-227ENST00000615517 FAM210AQ96ND0 272 aa3.68□□□□□ -1.82
MUC1-227ENST00000615517 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
MUC1-227ENST00000615517 XKRY2A2RUG3 117 aa3.67□□□□□ -1.82
MUC1-227ENST00000615517 TRIAP1O43715 76 aa3.67□□□□□ -1.82
MUC1-227ENST00000615517 CENPWQ5EE01 88 aa3.67□□□□□ -1.82
MUC1-227ENST00000615517 AKR1C8PQ5T2L2 129 aa3.67□□□□□ -1.82
MUC1-227ENST00000615517 TIMM21Q9BVV7 248 aa3.67□□□□□ -1.82
MUC1-227ENST00000615517 A0A1B0GV50 99 aa3.66□□□□□ -1.82
MUC1-227ENST00000615517 RAB19A4D1S5 217 aa3.66□□□□□ -1.82
MUC1-227ENST00000615517 SCO1O75880 301 aa3.66□□□□□ -1.82
MUC1-227ENST00000615517 NDUFA12Q9UI09 145 aa3.66□□□□□ -1.82
MUC1-227ENST00000615517 IGKV2-28A0A075B6P5 120 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 VCYO14598 125 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 SSNA1O43805 119 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 PFDN1O60925 122 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 IGKV2D-28P01615 120 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 FCER1GP30273 86 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 RPL39P62891 51 aaKnown RBP3.65□□□□□ -1.83
MUC1-227ENST00000615517 SMAGPQ0VAQ4 97 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 Q5BKY6 102 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 PET117Q6UWS5 81 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 FAM19A1Q7Z5A9 133 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 SPRR4Q96PI1 79 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
MUC1-227ENST00000615517 TRBV20OR9-2A0A075B6H5 130 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 IGLV5-37A0A075B6J1 123 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 TGIF2-C20orf24A0A0A6YYL0 155 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 IFITM10A6NMD0 228 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 TMEM238C9JI98 176 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 SMKR1H3BMG3 65 aa3.64□□□□□ -1.83
MUC1-227ENST00000615517 SMIM15Q7Z3B0 74 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms