RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 IGLV1-51P01701 117 aa9.95□□□□□ -0.82
GGA3-220ENST00000613421 SPATA25Q9BR10 227 aa9.95□□□□□ -0.82
GGA3-220ENST00000613421 SPTBN4Q9H254 2564 aa9.95□□□□□ -0.82
GGA3-220ENST00000613421 ABCA12Q86UK0 2595 aa9.95□□□□□ -0.82
GGA3-220ENST00000613421 KLK5Q9Y337 293 aaPredicted RBP9.95□□□□□ -0.82
GGA3-220ENST00000613421 SHISA2Q6UWI4 295 aa9.94□□□□□ -0.82
GGA3-220ENST00000613421 AMELXQ99217 191 aa9.94□□□□□ -0.82
GGA3-220ENST00000613421 NDUFS5O43920 106 aa9.94□□□□□ -0.82
GGA3-220ENST00000613421 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
GGA3-220ENST00000613421 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
GGA3-220ENST00000613421 TMEM258P61165 79 aa9.94□□□□□ -0.82
GGA3-220ENST00000613421 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
GGA3-220ENST00000613421 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
GGA3-220ENST00000613421 TRAV23DV6A0A075B6W5 121 aa9.93□□□□□ -0.82
GGA3-220ENST00000613421 PLA2G2AP14555 144 aa9.93□□□□□ -0.82
GGA3-220ENST00000613421 Q8IZM0 81 aa9.93□□□□□ -0.82
GGA3-220ENST00000613421 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
GGA3-220ENST00000613421 BEAN1Q3B7T3 259 aa9.92□□□□□ -0.82
GGA3-220ENST00000613421 LINC00694P0DN24 101 aa9.92□□□□□ -0.82
GGA3-220ENST00000613421 KPRPQ5T749 579 aaPredicted RBP9.92□□□□□ -0.82
GGA3-220ENST00000613421 NDUFB1O75438 58 aa9.92□□□□□ -0.82
GGA3-220ENST00000613421 SYCNQ0VAF6 134 aa9.92□□□□□ -0.82
GGA3-220ENST00000613421 C14orf177Q52M58 125 aa9.91□□□□□ -0.82
GGA3-220ENST00000613421 ATP5EP2Q5VTU8 51 aa9.91□□□□□ -0.82
GGA3-220ENST00000613421 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
GGA3-220ENST00000613421 COX6A2Q02221 97 aa9.91□□□□□ -0.82
GGA3-220ENST00000613421 Q6ZSN1 163 aa9.9□□□□□ -0.82
GGA3-220ENST00000613421 LINC01546A6NGU7 62 aa9.9□□□□□ -0.82
GGA3-220ENST00000613421 COX17Q14061 63 aa9.9□□□□□ -0.82
GGA3-220ENST00000613421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.9□□□□□ -0.82
GGA3-220ENST00000613421 SMR3AQ99954 134 aa9.9□□□□□ -0.82
GGA3-220ENST00000613421 MP68P56378 58 aa9.9□□□□□ -0.82
GGA3-220ENST00000613421 SETD2Q9BYW2 2564 aaPredicted RBP9.9□□□□□ -0.82
GGA3-220ENST00000613421 XGP55808 180 aa9.9□□□□□ -0.83
GGA3-220ENST00000613421 CSDC2Q9Y534 153 aaKnown RBP9.9□□□□□ -0.83
GGA3-220ENST00000613421 BPY2O14599 106 aa9.89□□□□□ -0.83
GGA3-220ENST00000613421 PCNTO95613 3336 aa9.89□□□□□ -0.83
GGA3-220ENST00000613421 UQCRQO14949 82 aa9.89□□□□□ -0.83
GGA3-220ENST00000613421 C16orf95Q9H693 158 aa9.89□□□□□ -0.83
GGA3-220ENST00000613421 HIGD2AQ9BW72 106 aa9.88□□□□□ -0.83
GGA3-220ENST00000613421 ADAMTSL4-AS1Q5T5F5 129 aa9.88□□□□□ -0.83
GGA3-220ENST00000613421 TRAV10A0A0B4J240 114 aa9.88□□□□□ -0.83
GGA3-220ENST00000613421 PTPRBP23467 1997 aa9.87□□□□□ -0.83
GGA3-220ENST00000613421 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
GGA3-220ENST00000613421 IGHV4-30-4P0DP06 118 aa9.87□□□□□ -0.83
GGA3-220ENST00000613421 FHL2Q14192 279 aa9.87□□□□□ -0.83
GGA3-220ENST00000613421 ENHOQ6UWT2 76 aa9.87□□□□□ -0.83
GGA3-220ENST00000613421 A0A087WZ39 114 aa9.87□□□□□ -0.83
GGA3-220ENST00000613421 Q6ZQY7 126 aa9.87□□□□□ -0.83
GGA3-220ENST00000613421 B9D2Q9BPU9 175 aa9.86□□□□□ -0.83
GGA3-220ENST00000613421 FAM19A4Q96LR4 140 aa9.86□□□□□ -0.83
GGA3-220ENST00000613421 MUC7Q8TAX7 377 aa9.86□□□□□ -0.83
GGA3-220ENST00000613421 IMUPQ9GZP8 106 aa9.86□□□□□ -0.83
GGA3-220ENST00000613421 M0R378 163 aa9.85□□□□□ -0.83
GGA3-220ENST00000613421 JMJD1CQ15652 2540 aa9.85□□□□□ -0.83
GGA3-220ENST00000613421 FAM19A5Q7Z5A7 132 aaPredicted RBP9.85□□□□□ -0.83
GGA3-220ENST00000613421 DOPEY1Q5JWR5 2465 aa9.85□□□□□ -0.83
GGA3-220ENST00000613421 CYSRT1A8MQ03 144 aa9.84□□□□□ -0.83
GGA3-220ENST00000613421 SCXQ7RTU7 201 aa9.84□□□□□ -0.83
GGA3-220ENST00000613421 FAM19A1Q7Z5A9 133 aa9.84□□□□□ -0.83
GGA3-220ENST00000613421 COL27A1Q8IZC6 1860 aaPredicted RBP9.84□□□□□ -0.83
GGA3-220ENST00000613421 LINC00315P59091 139 aa9.84□□□□□ -0.83
GGA3-220ENST00000613421 C20orf197Q8N268 126 aa9.83□□□□□ -0.84
GGA3-220ENST00000613421 C3orf22Q8N5N4 141 aa9.83□□□□□ -0.84
GGA3-220ENST00000613421 IL17DQ8TAD2 202 aa9.83□□□□□ -0.84
GGA3-220ENST00000613421 IGKV2-28A0A075B6P5 120 aa9.83□□□□□ -0.84
GGA3-220ENST00000613421 IGKV2D-28P01615 120 aa9.83□□□□□ -0.84
GGA3-220ENST00000613421 OXLD1Q5BKU9 147 aa9.83□□□□□ -0.84
GGA3-220ENST00000613421 AGRNO00468 2067 aa9.83□□□□□ -0.84
GGA3-220ENST00000613421 FN1P02751 2386 aaKnown RBP9.83□□□□□ -0.84
GGA3-220ENST00000613421 RPL28P46779 137 aaKnown RBP9.83□□□□□ -0.84
GGA3-220ENST00000613421 CCDC179H3BU77 68 aa9.82□□□□□ -0.84
GGA3-220ENST00000613421 CCKP06307 115 aa9.82□□□□□ -0.84
GGA3-220ENST00000613421 Q8N2B8 174 aa9.82□□□□□ -0.84
GGA3-220ENST00000613421 ZFYVE26Q68DK2 2539 aa9.82□□□□□ -0.84
GGA3-220ENST00000613421 UNQ6190/PRO20217Q6UXQ8 127 aa9.82□□□□□ -0.84
GGA3-220ENST00000613421 WFDC9Q8NEX5 89 aa9.82□□□□□ -0.84
GGA3-220ENST00000613421 FAM240AA0A1B0GVK7 77 aa9.81□□□□□ -0.84
GGA3-220ENST00000613421 C11orf72Q8NBR9 251 aa9.81□□□□□ -0.84
GGA3-220ENST00000613421 ZNF73O43830 326 aaPredicted RBP9.81□□□□□ -0.84
GGA3-220ENST00000613421 PRRC2CQ9Y520 2896 aaKnown RBP9.81□□□□□ -0.84
GGA3-220ENST00000613421 H0Y9J4 135 aa9.8□□□□□ -0.84
GGA3-220ENST00000613421 NANOS2P60321 138 aaKnown RBP9.8□□□□□ -0.84
GGA3-220ENST00000613421 C5orf47Q569G3 176 aa9.8□□□□□ -0.84
GGA3-220ENST00000613421 ZNF462Q96JM2 2506 aa9.8□□□□□ -0.84
GGA3-220ENST00000613421 A0A0J9YWU9 116 aa9.79□□□□□ -0.84
GGA3-220ENST00000613421 LRRK2Q5S007 2527 aa9.79□□□□□ -0.84
GGA3-220ENST00000613421 C9orf116Q5BN46 136 aaPredicted RBP9.79□□□□□ -0.84
GGA3-220ENST00000613421 CHD7Q9P2D1 2997 aa9.79□□□□□ -0.84
GGA3-220ENST00000613421 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.79□□□□□ -0.84
GGA3-220ENST00000613421 USP17L23D6RBM5 183 aa9.78□□□□□ -0.84
GGA3-220ENST00000613421 PRB2P02812 416 aaPredicted RBP9.78□□□□□ -0.84
GGA3-220ENST00000613421 DHRS4-AS1Q9P1J3 65 aa9.78□□□□□ -0.84
GGA3-220ENST00000613421 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.77□□□□□ -0.84
GGA3-220ENST00000613421 A0A1B0GUV1 79 aa9.77□□□□□ -0.85
GGA3-220ENST00000613421 C3orf84H3BNL1 204 aa9.77□□□□□ -0.85
GGA3-220ENST00000613421 Q6Q795 121 aa9.77□□□□□ -0.85
GGA3-220ENST00000613421 A0A096LNI7 61 aa9.76□□□□□ -0.85
GGA3-220ENST00000613421 SVIPQ8NHG7 77 aa9.76□□□□□ -0.85
GGA3-220ENST00000613421 RETNQ9HD89 108 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms