RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ZNF415Q09FC8 603 aa11.87□□□□□ -0.51
CNOT3-208ENST00000613073 DNAJC30Q96LL9 226 aa11.87□□□□□ -0.51
CNOT3-208ENST00000613073 C2CD3Q4AC94 2353 aa11.87□□□□□ -0.51
CNOT3-208ENST00000613073 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
CNOT3-208ENST00000613073 Q9UF83 564 aa11.87□□□□□ -0.51
CNOT3-208ENST00000613073 NSD1Q96L73 2696 aaPredicted RBP11.87□□□□□ -0.51
CNOT3-208ENST00000613073 NACAE9PAV3 2078 aa11.87□□□□□ -0.51
CNOT3-208ENST00000613073 VWFP04275 2813 aa11.86□□□□□ -0.51
CNOT3-208ENST00000613073 C5orf47Q569G3 176 aa11.86□□□□□ -0.51
CNOT3-208ENST00000613073 C11orf72Q8NBR9 251 aa11.85□□□□□ -0.51
CNOT3-208ENST00000613073 MIAQ16674 131 aa11.85□□□□□ -0.51
CNOT3-208ENST00000613073 Q6ZSN1 163 aa11.85□□□□□ -0.51
CNOT3-208ENST00000613073 EDA2RQ9HAV5 297 aa11.85□□□□□ -0.51
CNOT3-208ENST00000613073 HIVEP1P15822 2718 aa11.85□□□□□ -0.51
CNOT3-208ENST00000613073 FAM19A5Q7Z5A7 132 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-208ENST00000613073 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
CNOT3-208ENST00000613073 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-208ENST00000613073 KRTAP10-3P60369 221 aa11.84□□□□□ -0.51
CNOT3-208ENST00000613073 DEFB121Q5J5C9 76 aa11.84□□□□□ -0.51
CNOT3-208ENST00000613073 INAFM1C9JVW0 142 aa11.83□□□□□ -0.52
CNOT3-208ENST00000613073 UQCRQO14949 82 aa11.83□□□□□ -0.52
CNOT3-208ENST00000613073 RHOHQ15669 191 aa11.83□□□□□ -0.52
CNOT3-208ENST00000613073 TENM1Q9UKZ4 2725 aa11.82□□□□□ -0.52
CNOT3-208ENST00000613073 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
CNOT3-208ENST00000613073 RPL35AP18077 110 aaKnown RBP11.81□□□□□ -0.52
CNOT3-208ENST00000613073 IGLV1-51P01701 117 aa11.81□□□□□ -0.52
CNOT3-208ENST00000613073 DAZ2Q13117 558 aaKnown RBP11.81□□□□□ -0.52
CNOT3-208ENST00000613073 DAZ4Q86SG3 579 aaKnown RBP11.81□□□□□ -0.52
CNOT3-208ENST00000613073 SPANXDQ9BXN6 97 aa11.81□□□□□ -0.52
CNOT3-208ENST00000613073 DAZ3Q9NR90 486 aaKnown RBP11.81□□□□□ -0.52
CNOT3-208ENST00000613073 SPANXCQ9NY87 97 aa11.81□□□□□ -0.52
CNOT3-208ENST00000613073 SMIM9A6NGZ8 99 aa11.8□□□□□ -0.52
CNOT3-208ENST00000613073 hADV29S1A0JD25 119 aa11.8□□□□□ -0.52
CNOT3-208ENST00000613073 LINC00526Q96FQ7 95 aa11.8□□□□□ -0.52
CNOT3-208ENST00000613073 LINC00643Q86TS7 51 aa11.79□□□□□ -0.52
CNOT3-208ENST00000613073 CYSTM1Q9H1C7 97 aa11.79□□□□□ -0.52
CNOT3-208ENST00000613073 J3KT08 172 aa11.79□□□□□ -0.52
CNOT3-208ENST00000613073 GAGE2AQ6NT46 116 aa11.79□□□□□ -0.52
CNOT3-208ENST00000613073 TRGV1A0A0A0MS02 117 aa11.79□□□□□ -0.52
CNOT3-208ENST00000613073 VSIG2Q96IQ7 327 aa11.79□□□□□ -0.52
CNOT3-208ENST00000613073 LINC00467Q9BRT7 94 aa11.79□□□□□ -0.52
CNOT3-208ENST00000613073 IMUPQ9GZP8 106 aa11.79□□□□□ -0.52
CNOT3-208ENST00000613073 FAM104AQ969W3 186 aa11.78□□□□□ -0.52
CNOT3-208ENST00000613073 IGHV3-38A0A0C4DH36 116 aa11.78□□□□□ -0.52
CNOT3-208ENST00000613073 PF4P02776 101 aa11.77□□□□□ -0.53
CNOT3-208ENST00000613073 MRPS36P82909 103 aaKnown RBP11.77□□□□□ -0.53
CNOT3-208ENST00000613073 GIG44P09565 113 aaPredicted RBP11.77□□□□□ -0.53
CNOT3-208ENST00000613073 TRAV13-1A0A0B4J241 112 aa11.76□□□□□ -0.53
CNOT3-208ENST00000613073 IGHV3-53P01767 116 aa11.76□□□□□ -0.53
CNOT3-208ENST00000613073 ACYP1P07311 99 aa11.76□□□□□ -0.53
CNOT3-208ENST00000613073 C19orf73Q9NVV2 129 aa11.76□□□□□ -0.53
CNOT3-208ENST00000613073 ATRQ13535 2644 aa11.76□□□□□ -0.53
CNOT3-208ENST00000613073 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.76□□□□□ -0.53
CNOT3-208ENST00000613073 IGKV2-29A2NJV5 120 aaPredicted RBP11.76□□□□□ -0.53
CNOT3-208ENST00000613073 BEAN1Q3B7T3 259 aa11.76□□□□□ -0.53
CNOT3-208ENST00000613073 NBEAL2Q6ZNJ1 2754 aa11.76□□□□□ -0.53
CNOT3-208ENST00000613073 COX7CP15954 63 aa11.75□□□□□ -0.53
CNOT3-208ENST00000613073 PIK3CD-AS1Q5SR53 167 aa11.75□□□□□ -0.53
CNOT3-208ENST00000613073 Q6ZTI0 123 aa11.75□□□□□ -0.53
CNOT3-208ENST00000613073 BAALC-AS2P0C853 105 aa11.75□□□□□ -0.53
CNOT3-208ENST00000613073 KIR2DL5BQ8NHK3 375 aa11.75□□□□□ -0.53
CNOT3-208ENST00000613073 TIRAPP58753 221 aa11.74□□□□□ -0.53
CNOT3-208ENST00000613073 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
CNOT3-208ENST00000613073 Q9HAA7 133 aa11.74□□□□□ -0.53
CNOT3-208ENST00000613073 FLNBO75369 2602 aaKnown RBP11.74□□□□□ -0.53
CNOT3-208ENST00000613073 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
CNOT3-208ENST00000613073 CDKN2A-AS1Q9UH64 79 aa11.73□□□□□ -0.53
CNOT3-208ENST00000613073 COX7A2LO14548 114 aa11.73□□□□□ -0.53
CNOT3-208ENST00000613073 TRRAPQ9Y4A5 3859 aa11.73□□□□□ -0.53
CNOT3-208ENST00000613073 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-208ENST00000613073 SPATA3Q8NHX4 192 aa11.73□□□□□ -0.53
CNOT3-208ENST00000613073 IGKV3D-7A0A0C4DH55 119 aa11.72□□□□□ -0.53
CNOT3-208ENST00000613073 IL17DQ8TAD2 202 aa11.72□□□□□ -0.53
CNOT3-208ENST00000613073 C2orf48Q96LS8 159 aa11.72□□□□□ -0.53
CNOT3-208ENST00000613073 FAM218AQ96MZ4 157 aa11.72□□□□□ -0.53
CNOT3-208ENST00000613073 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.53
CNOT3-208ENST00000613073 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.54
CNOT3-208ENST00000613073 Q9H8V8 135 aa11.71□□□□□ -0.54
CNOT3-208ENST00000613073 DSCR8Q96T75 97 aa11.7□□□□□ -0.54
CNOT3-208ENST00000613073 TEP1Q99973 2627 aaKnown RBP11.69□□□□□ -0.54
CNOT3-208ENST00000613073 A0A087WVE0 104 aa11.69□□□□□ -0.54
CNOT3-208ENST00000613073 SOSTDC1Q6X4U4 206 aa11.69□□□□□ -0.54
CNOT3-208ENST00000613073 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.69□□□□□ -0.54
CNOT3-208ENST00000613073 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
CNOT3-208ENST00000613073 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
CNOT3-208ENST00000613073 WIPF1O43516 503 aa11.68□□□□□ -0.54
CNOT3-208ENST00000613073 C22orf24Q9Y442 160 aa11.68□□□□□ -0.54
CNOT3-208ENST00000613073 TINCRA0A1B0GVN0 87 aa11.68□□□□□ -0.54
CNOT3-208ENST00000613073 A0A1B0GX51 115 aa11.68□□□□□ -0.54
CNOT3-208ENST00000613073 CSNK1G2-AS1Q8NCQ2 148 aa11.68□□□□□ -0.54
CNOT3-208ENST00000613073 CIRBPQ14011 172 aaKnown RBP11.67□□□□□ -0.54
CNOT3-208ENST00000613073 PLAC8L1A1L4L8 177 aa11.67□□□□□ -0.54
CNOT3-208ENST00000613073 TRACP01848 142 aa11.67□□□□□ -0.54
CNOT3-208ENST00000613073 PYGO1Q9Y3Y4 419 aa11.67□□□□□ -0.54
CNOT3-208ENST00000613073 CRYGAP11844 174 aa11.67□□□□□ -0.54
CNOT3-208ENST00000613073 OR13C6PQ8NH95 151 aa11.67□□□□□ -0.54
CNOT3-208ENST00000613073 TRGV2A0A075B6R0 118 aa11.66□□□□□ -0.54
CNOT3-208ENST00000613073 COX6A2Q02221 97 aa11.66□□□□□ -0.54
CNOT3-208ENST00000613073 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
CNOT3-208ENST00000613073 ATP5G1P05496 136 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms