RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
RTN1-209ENST00000611068 PEMTQ9UBM1 199 aa11.61□□□□□ -0.55
RTN1-209ENST00000611068 PRO0628Q9UI54 55 aa11.6□□□□□ -0.55
RTN1-209ENST00000611068 TINCRA0A1B0GVN0 87 aa11.6□□□□□ -0.55
RTN1-209ENST00000611068 DEFB131AP59861 70 aa11.6□□□□□ -0.55
RTN1-209ENST00000611068 APRG1Q8IVJ8 170 aa11.6□□□□□ -0.55
RTN1-209ENST00000611068 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
RTN1-209ENST00000611068 GNRH2O43555 120 aa11.59□□□□□ -0.55
RTN1-209ENST00000611068 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
RTN1-209ENST00000611068 SPINK13Q1W4C9 94 aa11.58□□□□□ -0.55
RTN1-209ENST00000611068 HTN1P15515 57 aa11.58□□□□□ -0.56
RTN1-209ENST00000611068 PFN2P35080 140 aa11.58□□□□□ -0.56
RTN1-209ENST00000611068 DAZ2Q13117 558 aaKnown RBP11.58□□□□□ -0.56
RTN1-209ENST00000611068 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
RTN1-209ENST00000611068 C16orf95Q9H693 158 aa11.58□□□□□ -0.56
RTN1-209ENST00000611068 DAZ3Q9NR90 486 aaKnown RBP11.58□□□□□ -0.56
RTN1-209ENST00000611068 A0A087WVE0 104 aa11.57□□□□□ -0.56
RTN1-209ENST00000611068 PRM2P04554 102 aa11.57□□□□□ -0.56
RTN1-209ENST00000611068 PROK1P58294 105 aa11.57□□□□□ -0.56
RTN1-209ENST00000611068 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
RTN1-209ENST00000611068 SERP2Q8N6R1 65 aa11.57□□□□□ -0.56
RTN1-209ENST00000611068 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
RTN1-209ENST00000611068 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
RTN1-209ENST00000611068 TIRAPP58753 221 aa11.56□□□□□ -0.56
RTN1-209ENST00000611068 A0A0J9YX75 114 aa11.56□□□□□ -0.56
RTN1-209ENST00000611068 TIMM17AQ99595 171 aa11.56□□□□□ -0.56
RTN1-209ENST00000611068 IGKV3D-7A0A0C4DH55 119 aa11.55□□□□□ -0.56
RTN1-209ENST00000611068 A0A0J9YXV3 536 aa11.55□□□□□ -0.56
RTN1-209ENST00000611068 FHL2Q14192 279 aa11.55□□□□□ -0.56
RTN1-209ENST00000611068 NACAE9PAV3 2078 aa11.54□□□□□ -0.56
RTN1-209ENST00000611068 S100A4P26447 101 aaKnown RBP11.54□□□□□ -0.56
RTN1-209ENST00000611068 C22orf24Q9Y442 160 aa11.54□□□□□ -0.56
RTN1-209ENST00000611068 TRAV21A0A0B4J279 112 aa11.53□□□□□ -0.56
RTN1-209ENST00000611068 IGHV3-30-3P0DP02 117 aa11.53□□□□□ -0.56
RTN1-209ENST00000611068 SPATA3Q8NHX4 192 aa11.53□□□□□ -0.56
RTN1-209ENST00000611068 PHLDA3Q9Y5J5 127 aa11.53□□□□□ -0.56
RTN1-209ENST00000611068 DAND5Q8N907 189 aa11.52□□□□□ -0.57
RTN1-209ENST00000611068 SEC61GP60059 68 aa11.52□□□□□ -0.57
RTN1-209ENST00000611068 A8MZ25 164 aa11.51□□□□□ -0.57
RTN1-209ENST00000611068 POLR2KP53803 58 aaKnown RBP11.51□□□□□ -0.57
RTN1-209ENST00000611068 WFDC10AQ9H1F0 79 aa11.51□□□□□ -0.57
RTN1-209ENST00000611068 TRRAPQ9Y4A5 3859 aa11.51□□□□□ -0.57
RTN1-209ENST00000611068 MAP6D1Q9H9H5 199 aa11.51□□□□□ -0.57
RTN1-209ENST00000611068 LENEPQ9Y5L5 61 aa11.51□□□□□ -0.57
RTN1-209ENST00000611068 NXPH4O95158 308 aa11.5□□□□□ -0.57
RTN1-209ENST00000611068 MIAQ16674 131 aa11.5□□□□□ -0.57
RTN1-209ENST00000611068 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.5□□□□□ -0.57
RTN1-209ENST00000611068 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
RTN1-209ENST00000611068 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
RTN1-209ENST00000611068 KLLNB2CW77 178 aa11.5□□□□□ -0.57
RTN1-209ENST00000611068 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
RTN1-209ENST00000611068 LINC01561Q8N1V8 128 aa11.5□□□□□ -0.57
RTN1-209ENST00000611068 BAALC-AS2P0C853 105 aa11.49□□□□□ -0.57
RTN1-209ENST00000611068 LINC00315P59091 139 aa11.49□□□□□ -0.57
RTN1-209ENST00000611068 USP17L23D6RBM5 183 aa11.48□□□□□ -0.57
RTN1-209ENST00000611068 RBMY1A1P0DJD3 496 aaKnown RBP11.48□□□□□ -0.57
RTN1-209ENST00000611068 RBMY1CP0DJD4 496 aa11.48□□□□□ -0.57
RTN1-209ENST00000611068 RBMY1FQ15415 496 aaKnown RBP11.48□□□□□ -0.57
RTN1-209ENST00000611068 FBN1P35555 2871 aaKnown RBP11.48□□□□□ -0.57
RTN1-209ENST00000611068 PF4P02776 101 aa11.48□□□□□ -0.57
RTN1-209ENST00000611068 RNASE3P12724 160 aaKnown RBP11.47□□□□□ -0.57
RTN1-209ENST00000611068 MUC4Q99102 2169 aa11.47□□□□□ -0.57
RTN1-209ENST00000611068 FAM236DA0A1B0GTK5 79 aa11.47□□□□□ -0.57
RTN1-209ENST00000611068 VCYO14598 125 aa11.47□□□□□ -0.57
RTN1-209ENST00000611068 FAM236CP0DP71 79 aa11.47□□□□□ -0.57
RTN1-209ENST00000611068 ODF3L2Q3SX64 289 aa11.47□□□□□ -0.57
RTN1-209ENST00000611068 SUMO4Q6EEV6 95 aa11.47□□□□□ -0.57
RTN1-209ENST00000611068 NDUFA12Q9UI09 145 aa11.47□□□□□ -0.57
RTN1-209ENST00000611068 BEAN1Q3B7T3 259 aa11.46□□□□□ -0.57
RTN1-209ENST00000611068 C9orf85Q96MD7 179 aa11.46□□□□□ -0.57
RTN1-209ENST00000611068 IGHV3OR16-12A0A075B7B8 117 aa11.46□□□□□ -0.58
RTN1-209ENST00000611068 PPP1R17O96001 155 aa11.46□□□□□ -0.58
RTN1-209ENST00000611068 A0A087WWL8 130 aa11.45□□□□□ -0.58
RTN1-209ENST00000611068 COX7A2LO14548 114 aa11.45□□□□□ -0.58
RTN1-209ENST00000611068 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
RTN1-209ENST00000611068 KIF25-AS1Q9Y6Z4 181 aa11.45□□□□□ -0.58
RTN1-209ENST00000611068 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
RTN1-209ENST00000611068 FAM218AQ96MZ4 157 aa11.44□□□□□ -0.58
RTN1-209ENST00000611068 NBEAL2Q6ZNJ1 2754 aa11.44□□□□□ -0.58
RTN1-209ENST00000611068 F5H697 171 aa11.43□□□□□ -0.58
RTN1-209ENST00000611068 C9orf129Q5T035 196 aaKnown RBP11.43□□□□□ -0.58
RTN1-209ENST00000611068 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
RTN1-209ENST00000611068 Q9HAA7 133 aa11.42□□□□□ -0.58
RTN1-209ENST00000611068 LINC00846Q9NV44 126 aa11.42□□□□□ -0.58
RTN1-209ENST00000611068 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
RTN1-209ENST00000611068 FAM74A4Q5TZK3 123 aa11.41□□□□□ -0.58
RTN1-209ENST00000611068 STHQ8IWL8 128 aa11.41□□□□□ -0.58
RTN1-209ENST00000611068 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
RTN1-209ENST00000611068 IGHV1OR15-1A0A075B7D0 117 aa11.41□□□□□ -0.58
RTN1-209ENST00000611068 TRBV27A0A0K0K1C4 114 aa11.41□□□□□ -0.58
RTN1-209ENST00000611068 A0A0U1RQV1 116 aa11.41□□□□□ -0.58
RTN1-209ENST00000611068 TMEM243Q9BU79 118 aa11.41□□□□□ -0.58
RTN1-209ENST00000611068 INAFM2P0DMQ5 153 aa11.4□□□□□ -0.58
RTN1-209ENST00000611068 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
RTN1-209ENST00000611068 Q6JHZ5 121 aa11.39□□□□□ -0.59
RTN1-209ENST00000611068 V9GYY9 64 aa11.39□□□□□ -0.59
RTN1-209ENST00000611068 MAST4O15021 2626 aa11.39□□□□□ -0.59
RTN1-209ENST00000611068 IGHV3-16A0A0C4DH30 117 aa11.39□□□□□ -0.59
RTN1-209ENST00000611068 IGHV1-58A0A0C4DH39 117 aa11.39□□□□□ -0.59
RTN1-209ENST00000611068 EPM2AB3EWF7 344 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms