RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 G3V4G9 280 aa9.56□□□□□ -0.88
NEK3-205ENST00000610828 TEX48A0A1B0GUV7 120 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 NDUFA1O15239 70 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 NPC2P61916 151 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 WFDC2Q14508 124 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 WFDC9Q8NEX5 89 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 FLNBO75369 2602 aaKnown RBP9.55□□□□□ -0.88
NEK3-205ENST00000610828 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 EIF4EBP3O60516 100 aaPredicted RBP9.55□□□□□ -0.88
NEK3-205ENST00000610828 ATP6V0E2Q8NHE4 81 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 SPANXDQ9BXN6 97 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 Q9H8V8 135 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 SPANXCQ9NY87 97 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 PRO0255Q9UI72 69 aa9.55□□□□□ -0.88
NEK3-205ENST00000610828 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.54□□□□□ -0.88
NEK3-205ENST00000610828 LYRM9A8MSI8 78 aa9.54□□□□□ -0.88
NEK3-205ENST00000610828 F8W1H4 67 aa9.54□□□□□ -0.88
NEK3-205ENST00000610828 MIAQ16674 131 aa9.54□□□□□ -0.88
NEK3-205ENST00000610828 A0A0B4J2C4 111 aa9.53□□□□□ -0.88
NEK3-205ENST00000610828 A0A096LPF7 62 aa9.53□□□□□ -0.88
NEK3-205ENST00000610828 IGHV4-28A0A0C4DH34 117 aa9.53□□□□□ -0.88
NEK3-205ENST00000610828 F5H768 121 aa9.53□□□□□ -0.88
NEK3-205ENST00000610828 H7C2G1 150 aa9.53□□□□□ -0.88
NEK3-205ENST00000610828 PSMB2P49721 201 aa9.53□□□□□ -0.88
NEK3-205ENST00000610828 DAND5Q8N907 189 aa9.53□□□□□ -0.88
NEK3-205ENST00000610828 ZNF625Q96I27 306 aaPredicted RBP9.53□□□□□ -0.88
NEK3-205ENST00000610828 LYRM7Q5U5X0 104 aa9.52□□□□□ -0.88
NEK3-205ENST00000610828 IGHV3-33P01772 117 aa9.52□□□□□ -0.89
NEK3-205ENST00000610828 PAX4O43316 350 aa9.51□□□□□ -0.89
NEK3-205ENST00000610828 SCGB1C2P0DMR2 95 aa9.51□□□□□ -0.89
NEK3-205ENST00000610828 IGHV4-30-4P0DP06 118 aa9.51□□□□□ -0.89
NEK3-205ENST00000610828 CIRBPQ14011 172 aaKnown RBP9.51□□□□□ -0.89
NEK3-205ENST00000610828 SH2D6Q7Z4S9 175 aa9.51□□□□□ -0.89
NEK3-205ENST00000610828 ERG28Q9UKR5 140 aa9.51□□□□□ -0.89
NEK3-205ENST00000610828 TIMM17BO60830 172 aa9.51□□□□□ -0.89
NEK3-205ENST00000610828 ETDBQ3ZM63 59 aa9.51□□□□□ -0.89
NEK3-205ENST00000610828 A0A0U1RRA0 63 aa9.5□□□□□ -0.89
NEK3-205ENST00000610828 TMEM262E9PQX1 116 aa9.5□□□□□ -0.89
NEK3-205ENST00000610828 DAD1P61803 113 aa9.5□□□□□ -0.89
NEK3-205ENST00000610828 Q1RN00 199 aa9.5□□□□□ -0.89
NEK3-205ENST00000610828 PRIMA1Q86XR5 153 aa9.5□□□□□ -0.89
NEK3-205ENST00000610828 WIPF1O43516 503 aa9.5□□□□□ -0.89
NEK3-205ENST00000610828 Q8NAQ8 132 aa9.5□□□□□ -0.89
NEK3-205ENST00000610828 PRO0461Q9UI25 63 aa9.5□□□□□ -0.89
NEK3-205ENST00000610828 TCL1BO95988 128 aa9.49□□□□□ -0.89
NEK3-205ENST00000610828 MIFP14174 115 aa9.49□□□□□ -0.89
NEK3-205ENST00000610828 CELA1Q9UNI1 258 aa9.49□□□□□ -0.89
NEK3-205ENST00000610828 MEIG1Q5JSS6 88 aa9.48□□□□□ -0.89
NEK3-205ENST00000610828 TRBV20-1A0A075B6N2 111 aa9.48□□□□□ -0.89
NEK3-205ENST00000610828 IFITM1P13164 125 aa9.48□□□□□ -0.89
NEK3-205ENST00000610828 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
NEK3-205ENST00000610828 RNF183Q96D59 192 aa9.47□□□□□ -0.89
NEK3-205ENST00000610828 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
NEK3-205ENST00000610828 IGHV3OR16-9A0A0B4J2B5 98 aa9.46□□□□□ -0.9
NEK3-205ENST00000610828 ATP5G1P05496 136 aa9.46□□□□□ -0.9
NEK3-205ENST00000610828 KRTAP24-1Q3LI83 254 aa9.46□□□□□ -0.9
NEK3-205ENST00000610828 TRAV26-1A0A087WT03 109 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 LINC00959A0A1B0GUT2 108 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 HERV-K104P63124 156 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 LINC00308Q8TCZ7 52 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 A0A1B0GUV1 79 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 HTN3P15516 51 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 C5orf38Q86SI9 138 aa9.45□□□□□ -0.9
NEK3-205ENST00000610828 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
NEK3-205ENST00000610828 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
NEK3-205ENST00000610828 FBN1P35555 2871 aaKnown RBP9.44□□□□□ -0.9
NEK3-205ENST00000610828 ANK2Q01484 3957 aa9.44□□□□□ -0.9
NEK3-205ENST00000610828 A0A087WZ39 114 aa9.43□□□□□ -0.9
NEK3-205ENST00000610828 J3QR89 54 aa9.43□□□□□ -0.9
NEK3-205ENST00000610828 TRIAP1O43715 76 aa9.43□□□□□ -0.9
NEK3-205ENST00000610828 XCL1P47992 114 aa9.43□□□□□ -0.9
NEK3-205ENST00000610828 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
NEK3-205ENST00000610828 C3orf56Q8N813 242 aa9.42□□□□□ -0.9
NEK3-205ENST00000610828 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
NEK3-205ENST00000610828 RPL13AP40429 203 aaKnown RBP9.42□□□□□ -0.9
NEK3-205ENST00000610828 KRTAP10-11P60412 298 aa9.42□□□□□ -0.9
NEK3-205ENST00000610828 SS18Q15532 418 aa9.42□□□□□ -0.9
NEK3-205ENST00000610828 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
NEK3-205ENST00000610828 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
NEK3-205ENST00000610828 CMYA5Q8N3K9 4069 aa9.41□□□□□ -0.9
NEK3-205ENST00000610828 LINC00269Q8N2A0 174 aa9.4□□□□□ -0.9
NEK3-205ENST00000610828 Q8N3U1 123 aa9.4□□□□□ -0.9
NEK3-205ENST00000610828 MRPL23Q16540 153 aaKnown RBP9.39□□□□□ -0.91
NEK3-205ENST00000610828 SHISA2Q6UWI4 295 aa9.39□□□□□ -0.91
NEK3-205ENST00000610828 STAB1Q9NY15 2570 aa9.39□□□□□ -0.91
NEK3-205ENST00000610828 ATXN8Q156A1 80 aa9.39□□□□□ -0.91
NEK3-205ENST00000610828 PKD1L1Q8TDX9 2849 aa9.39□□□□□ -0.91
NEK3-205ENST00000610828 C9JAW5 83 aa9.38□□□□□ -0.91
NEK3-205ENST00000610828 ANGP03950 147 aaKnown RBP9.38□□□□□ -0.91
NEK3-205ENST00000610828 COX6CP09669 75 aa9.38□□□□□ -0.91
NEK3-205ENST00000610828 FOXI1Q12951 378 aa9.38□□□□□ -0.91
NEK3-205ENST00000610828 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
NEK3-205ENST00000610828 RETNQ9HD89 108 aa9.38□□□□□ -0.91
NEK3-205ENST00000610828 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
NEK3-205ENST00000610828 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
NEK3-205ENST00000610828 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
NEK3-205ENST00000610828 SLC25A20O43772 301 aa9.37□□□□□ -0.91
NEK3-205ENST00000610828 LINC00158P58513 81 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms