RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 COX7CP15954 63 aa15.82■□□□□ 0.12
SHANK2-220ENST00000608988 CMC4P56277 68 aaPredicted RBP15.82■□□□□ 0.12
SHANK2-220ENST00000608988 TRBV6-4A0A1B0GX49 114 aa15.81■□□□□ 0.12
SHANK2-220ENST00000608988 IGHV4-31P0DP07 118 aa15.81■□□□□ 0.12
SHANK2-220ENST00000608988 SMIM11BQ8TCY0 68 aa15.81■□□□□ 0.12
SHANK2-220ENST00000608988 Q9HAA7 133 aa15.8■□□□□ 0.12
SHANK2-220ENST00000608988 Q6JHZ5 121 aa15.8■□□□□ 0.12
SHANK2-220ENST00000608988 KHDC1LQ5JSQ8 128 aa15.79■□□□□ 0.12
SHANK2-220ENST00000608988 C16orf74Q96GX8 76 aa15.78■□□□□ 0.12
SHANK2-220ENST00000608988 CRYGAP11844 174 aa15.78■□□□□ 0.12
SHANK2-220ENST00000608988 LINC00158P58513 81 aa15.78■□□□□ 0.12
SHANK2-220ENST00000608988 ZFHX3Q15911 3703 aa15.77■□□□□ 0.12
SHANK2-220ENST00000608988 CCL18P55774 89 aa15.77■□□□□ 0.11
SHANK2-220ENST00000608988 KLK5Q9Y337 293 aaPredicted RBP15.77■□□□□ 0.11
SHANK2-220ENST00000608988 A0A087WYN8 130 aa15.76■□□□□ 0.11
SHANK2-220ENST00000608988 LRRC75A-AS1Q8N1F1 130 aa15.76■□□□□ 0.11
SHANK2-220ENST00000608988 TMEM86BQ8N661 226 aa15.76■□□□□ 0.11
SHANK2-220ENST00000608988 C2orf48Q96LS8 159 aa15.76■□□□□ 0.11
SHANK2-220ENST00000608988 A0A087WZ39 114 aa15.75■□□□□ 0.11
SHANK2-220ENST00000608988 IGHV3OR16-9A0A0B4J2B5 98 aa15.75■□□□□ 0.11
SHANK2-220ENST00000608988 A0A1B0GX51 115 aa15.75■□□□□ 0.11
SHANK2-220ENST00000608988 NRGNQ92686 78 aa15.75■□□□□ 0.11
SHANK2-220ENST00000608988 NOP10Q9NPE3 64 aaKnown RBP15.75■□□□□ 0.11
SHANK2-220ENST00000608988 LY6G6DO95868 133 aa15.74■□□□□ 0.11
SHANK2-220ENST00000608988 TOMM7Q9P0U1 55 aa15.74■□□□□ 0.11
SHANK2-220ENST00000608988 KMT2BQ9UMN6 2715 aaPredicted RBP15.73■□□□□ 0.11
SHANK2-220ENST00000608988 RPL18AQ02543 176 aaKnown RBP15.73■□□□□ 0.11
SHANK2-220ENST00000608988 CSPG4Q6UVK1 2322 aa15.72■□□□□ 0.11
SHANK2-220ENST00000608988 C3orf56Q8N813 242 aa15.71■□□□□ 0.11
SHANK2-220ENST00000608988 MAPK1IP1LQ8NDC0 245 aa15.71■□□□□ 0.11
SHANK2-220ENST00000608988 TRGV2A0A075B6R0 118 aa15.71■□□□□ 0.11
SHANK2-220ENST00000608988 BBC3Q96PG8 261 aaPredicted RBP15.71■□□□□ 0.11
SHANK2-220ENST00000608988 TRBV6-8A0A0A6YYG3 113 aa15.7■□□□□ 0.1
SHANK2-220ENST00000608988 PLAC8L1A1L4L8 177 aa15.7■□□□□ 0.1
SHANK2-220ENST00000608988 C14orf132Q9NPU4 83 aa15.7■□□□□ 0.1
SHANK2-220ENST00000608988 CELSR1Q9NYQ6 3014 aa15.7■□□□□ 0.1
SHANK2-220ENST00000608988 LECT2O14960 151 aa15.68■□□□□ 0.1
SHANK2-220ENST00000608988 C11orf44Q8N8P7 122 aa15.68■□□□□ 0.1
SHANK2-220ENST00000608988 LINC00167Q96N53 147 aa15.68■□□□□ 0.1
SHANK2-220ENST00000608988 ORMDL1Q9P0S3 153 aa15.68■□□□□ 0.1
SHANK2-220ENST00000608988 TRGV4A0A0C4DH28 118 aa15.67■□□□□ 0.1
SHANK2-220ENST00000608988 CFAP161Q6P656 301 aa15.67■□□□□ 0.1
SHANK2-220ENST00000608988 LINC01561Q8N1V8 128 aa15.67■□□□□ 0.1
SHANK2-220ENST00000608988 J3KT08 172 aa15.67■□□□□ 0.1
SHANK2-220ENST00000608988 PAX4O43316 350 aa15.67■□□□□ 0.1
SHANK2-220ENST00000608988 RPS28P62857 69 aaKnown RBP15.67■□□□□ 0.1
SHANK2-220ENST00000608988 S100A7L2Q5SY68 101 aa15.67■□□□□ 0.1
SHANK2-220ENST00000608988 IGLV4-60A0A075B6I1 120 aa15.65■□□□□ 0.1
SHANK2-220ENST00000608988 GIG44P09565 113 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-220ENST00000608988 LINC00846Q9NV44 126 aa15.65■□□□□ 0.1
SHANK2-220ENST00000608988 FLNCQ14315 2725 aa15.65■□□□□ 0.1
SHANK2-220ENST00000608988 LOC100131303A0A0U1RQF7 123 aa15.65■□□□□ 0.1
SHANK2-220ENST00000608988 CCL24O00175 119 aa15.65■□□□□ 0.1
SHANK2-220ENST00000608988 SERP2Q8N6R1 65 aa15.64■□□□□ 0.09
SHANK2-220ENST00000608988 C9orf129Q5T035 196 aaKnown RBP15.63■□□□□ 0.09
SHANK2-220ENST00000608988 ATP5EP2Q5VTU8 51 aa15.63■□□□□ 0.09
SHANK2-220ENST00000608988 ZNF462Q96JM2 2506 aa15.63■□□□□ 0.09
SHANK2-220ENST00000608988 CREBBPQ92793 2442 aa15.63■□□□□ 0.09
SHANK2-220ENST00000608988 A0A1W2PRX2 142 aa15.63■□□□□ 0.09
SHANK2-220ENST00000608988 JMJD7-PLA2G4BH0Y9G9 81 aa15.63■□□□□ 0.09
SHANK2-220ENST00000608988 CCKP06307 115 aa15.63■□□□□ 0.09
SHANK2-220ENST00000608988 OR13C6PQ8NH95 151 aa15.63■□□□□ 0.09
SHANK2-220ENST00000608988 LINC00959A0A1B0GUT2 108 aa15.62■□□□□ 0.09
SHANK2-220ENST00000608988 FHL2Q14192 279 aa15.62■□□□□ 0.09
SHANK2-220ENST00000608988 CHD6Q8TD26 2715 aa15.62■□□□□ 0.09
SHANK2-220ENST00000608988 USP9XQ93008 2570 aaPredicted RBP15.62■□□□□ 0.09
SHANK2-220ENST00000608988 PFN2P35080 140 aa15.61■□□□□ 0.09
SHANK2-220ENST00000608988 Q8IZM0 81 aa15.61■□□□□ 0.09
SHANK2-220ENST00000608988 IGKV3OR2-268A0A0C4DH90 116 aa15.61■□□□□ 0.09
SHANK2-220ENST00000608988 C6orf226Q5I0X4 101 aa15.61■□□□□ 0.09
SHANK2-220ENST00000608988 TMEM258P61165 79 aa15.59■□□□□ 0.09
SHANK2-220ENST00000608988 DOPEY1Q5JWR5 2465 aa15.59■□□□□ 0.09
SHANK2-220ENST00000608988 IGKV3D-7A0A0C4DH55 119 aa15.59■□□□□ 0.09
SHANK2-220ENST00000608988 NCR3O14931 201 aa15.59■□□□□ 0.09
SHANK2-220ENST00000608988 ZNF843Q8N446 348 aa15.59■□□□□ 0.09
SHANK2-220ENST00000608988 CR1P17927 2039 aa15.58■□□□□ 0.09
SHANK2-220ENST00000608988 NDUFC2O95298 119 aa15.58■□□□□ 0.08
SHANK2-220ENST00000608988 SS18Q15532 418 aa15.58■□□□□ 0.08
SHANK2-220ENST00000608988 CSNK1G2-AS1Q8NCQ2 148 aa15.58■□□□□ 0.08
SHANK2-220ENST00000608988 UBR5O95071 2799 aaPredicted RBP15.57■□□□□ 0.08
SHANK2-220ENST00000608988 PRB1P04280 392 aa15.57■□□□□ 0.08
SHANK2-220ENST00000608988 MYO18BQ8IUG5 2567 aa15.57■□□□□ 0.08
SHANK2-220ENST00000608988 A0A1B0GUV1 79 aa15.57■□□□□ 0.08
SHANK2-220ENST00000608988 hADV29S1A0JD25 119 aa15.55■□□□□ 0.08
SHANK2-220ENST00000608988 TMEM256-PLSCR3K7ERE1 68 aa15.55■□□□□ 0.08
SHANK2-220ENST00000608988 USP17L23D6RBM5 183 aa15.54■□□□□ 0.08
SHANK2-220ENST00000608988 COX17Q14061 63 aa15.54■□□□□ 0.08
SHANK2-220ENST00000608988 UPK3BQ9BT76 320 aa15.54■□□□□ 0.08
SHANK2-220ENST00000608988 COL12A1Q99715 3063 aa15.54■□□□□ 0.08
SHANK2-220ENST00000608988 DEFB113Q30KQ7 82 aa15.54■□□□□ 0.08
SHANK2-220ENST00000608988 FAM208BQ5VWN6 2430 aa15.53■□□□□ 0.08
SHANK2-220ENST00000608988 SPG11Q96JI7 2443 aa15.53■□□□□ 0.08
SHANK2-220ENST00000608988 C19orf73Q9NVV2 129 aa15.53■□□□□ 0.08
SHANK2-220ENST00000608988 SLPIP03973 132 aa15.52■□□□□ 0.08
SHANK2-220ENST00000608988 Q8N814 137 aa15.52■□□□□ 0.08
SHANK2-220ENST00000608988 VPS13CQ709C8 3753 aa15.52■□□□□ 0.08
SHANK2-220ENST00000608988 KIR2DL5BQ8NHK3 375 aa15.52■□□□□ 0.07
SHANK2-220ENST00000608988 TRBV10-3A0A0K0K1G6 114 aa15.51■□□□□ 0.07
SHANK2-220ENST00000608988 RPL35AP18077 110 aaKnown RBP15.51■□□□□ 0.07
SHANK2-220ENST00000608988 DNAJC9-AS1A6NH13 148 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms