RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 IGHV3-33P01772 117 aa9.24□□□□□ -0.93
NOTCH3-206ENST00000601011 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
NOTCH3-206ENST00000601011 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
NOTCH3-206ENST00000601011 K7EQD1 137 aa9.24□□□□□ -0.93
NOTCH3-206ENST00000601011 POLR2KP53803 58 aaKnown RBP9.24□□□□□ -0.93
NOTCH3-206ENST00000601011 IGLV2-18A0A075B6J9 118 aa9.24□□□□□ -0.93
NOTCH3-206ENST00000601011 LINC00694P0DN24 101 aa9.24□□□□□ -0.93
NOTCH3-206ENST00000601011 LGALS9O00182 355 aa9.23□□□□□ -0.93
NOTCH3-206ENST00000601011 ATP5G1P05496 136 aa9.23□□□□□ -0.93
NOTCH3-206ENST00000601011 FAM222AQ5U5X8 452 aa9.23□□□□□ -0.93
NOTCH3-206ENST00000601011 CFAP161Q6P656 301 aa9.23□□□□□ -0.93
NOTCH3-206ENST00000601011 TMEM89A2RUT3 159 aa9.23□□□□□ -0.93
NOTCH3-206ENST00000601011 CDIP1Q9H305 208 aa9.23□□□□□ -0.93
NOTCH3-206ENST00000601011 CRPP02741 224 aa9.22□□□□□ -0.93
NOTCH3-206ENST00000601011 ZNF22P17026 224 aaPredicted RBP9.22□□□□□ -0.93
NOTCH3-206ENST00000601011 VSIG2Q96IQ7 327 aa9.22□□□□□ -0.93
NOTCH3-206ENST00000601011 C1orf158Q8N1D5 194 aa9.22□□□□□ -0.93
NOTCH3-206ENST00000601011 BAALC-AS2P0C853 105 aa9.22□□□□□ -0.93
NOTCH3-206ENST00000601011 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
NOTCH3-206ENST00000601011 RHOHQ15669 191 aa9.21□□□□□ -0.94
NOTCH3-206ENST00000601011 PIK3CD-AS1Q5SR53 167 aa9.21□□□□□ -0.94
NOTCH3-206ENST00000601011 C9orf85Q96MD7 179 aa9.21□□□□□ -0.94
NOTCH3-206ENST00000601011 A0A096LNT2 108 aa9.2□□□□□ -0.94
NOTCH3-206ENST00000601011 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.2□□□□□ -0.94
NOTCH3-206ENST00000601011 LEPROTO15243 131 aa9.2□□□□□ -0.94
NOTCH3-206ENST00000601011 RETNQ9HD89 108 aa9.2□□□□□ -0.94
NOTCH3-206ENST00000601011 IGHV4-4A0A075B6R2 117 aa9.19□□□□□ -0.94
NOTCH3-206ENST00000601011 TRBV27A0A0K0K1C4 114 aa9.19□□□□□ -0.94
NOTCH3-206ENST00000601011 KLK5Q9Y337 293 aaPredicted RBP9.19□□□□□ -0.94
NOTCH3-206ENST00000601011 TMEM263Q8WUH6 116 aaKnown RBP9.19□□□□□ -0.94
NOTCH3-206ENST00000601011 TIMM17AQ99595 171 aa9.19□□□□□ -0.94
NOTCH3-206ENST00000601011 ATP6V0E2Q8NHE4 81 aa9.19□□□□□ -0.94
NOTCH3-206ENST00000601011 LRRC75A-AS1Q8N1F1 130 aa9.18□□□□□ -0.94
NOTCH3-206ENST00000601011 LINC00315P59091 139 aa9.18□□□□□ -0.94
NOTCH3-206ENST00000601011 FHL3Q13643 280 aa9.18□□□□□ -0.94
NOTCH3-206ENST00000601011 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
NOTCH3-206ENST00000601011 SLPIP03973 132 aa9.18□□□□□ -0.94
NOTCH3-206ENST00000601011 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
NOTCH3-206ENST00000601011 KLK12Q9UKR0 248 aa9.18□□□□□ -0.94
NOTCH3-206ENST00000601011 TRBV10-2A0A0K0K1G8 114 aa9.17□□□□□ -0.94
NOTCH3-206ENST00000601011 CR1P17927 2039 aa9.17□□□□□ -0.94
NOTCH3-206ENST00000601011 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
NOTCH3-206ENST00000601011 COX8CQ7Z4L0 72 aa9.17□□□□□ -0.94
NOTCH3-206ENST00000601011 SHISA2Q6UWI4 295 aa9.17□□□□□ -0.94
NOTCH3-206ENST00000601011 SPATA3Q8NHX4 192 aa9.17□□□□□ -0.94
NOTCH3-206ENST00000601011 MED14OSP0DP75 135 aa9.16□□□□□ -0.94
NOTCH3-206ENST00000601011 ZMAT4Q9H898 229 aa9.16□□□□□ -0.94
NOTCH3-206ENST00000601011 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
NOTCH3-206ENST00000601011 IGLV4-69A0A075B6H9 119 aa9.16□□□□□ -0.94
NOTCH3-206ENST00000601011 COX6A2Q02221 97 aa9.16□□□□□ -0.94
NOTCH3-206ENST00000601011 C16orf74Q96GX8 76 aa9.16□□□□□ -0.94
NOTCH3-206ENST00000601011 C14orf132Q9NPU4 83 aa9.16□□□□□ -0.94
NOTCH3-206ENST00000601011 RPL32P62910 135 aaKnown RBP9.15□□□□□ -0.94
NOTCH3-206ENST00000601011 LINC00269Q8N2A0 174 aa9.15□□□□□ -0.94
NOTCH3-206ENST00000601011 HILS1P60008 231 aa9.15□□□□□ -0.95
NOTCH3-206ENST00000601011 SS18Q15532 418 aa9.15□□□□□ -0.95
NOTCH3-206ENST00000601011 POM121L12Q8N7R1 296 aa9.14□□□□□ -0.95
NOTCH3-206ENST00000601011 PRO0461Q9UI25 63 aa9.14□□□□□ -0.95
NOTCH3-206ENST00000601011 HAMPP81172 84 aa9.14□□□□□ -0.95
NOTCH3-206ENST00000601011 ADAMTSL4-AS1Q5T5F5 129 aa9.14□□□□□ -0.95
NOTCH3-206ENST00000601011 MIR7-3HGQ8N6C7 128 aa9.14□□□□□ -0.95
NOTCH3-206ENST00000601011 UBE2D1P51668 147 aa9.14□□□□□ -0.95
NOTCH3-206ENST00000601011 LAMTOR3Q9UHA4 124 aa9.14□□□□□ -0.95
NOTCH3-206ENST00000601011 KMT2BQ9UMN6 2715 aaPredicted RBP9.14□□□□□ -0.95
NOTCH3-206ENST00000601011 A0A1B0GX51 115 aa9.13□□□□□ -0.95
NOTCH3-206ENST00000601011 HERVK_113P63121 156 aa9.13□□□□□ -0.95
NOTCH3-206ENST00000601011 S100A7L2Q5SY68 101 aa9.13□□□□□ -0.95
NOTCH3-206ENST00000601011 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
NOTCH3-206ENST00000601011 DAZ2Q13117 558 aaKnown RBP9.13□□□□□ -0.95
NOTCH3-206ENST00000601011 DAZ4Q86SG3 579 aaKnown RBP9.13□□□□□ -0.95
NOTCH3-206ENST00000601011 DAZ3Q9NR90 486 aaKnown RBP9.13□□□□□ -0.95
NOTCH3-206ENST00000601011 IGHV1-58A0A0C4DH39 117 aa9.12□□□□□ -0.95
NOTCH3-206ENST00000601011 KRTAP1-3Q8IUG1 177 aa9.12□□□□□ -0.95
NOTCH3-206ENST00000601011 Q8N3U1 123 aa9.12□□□□□ -0.95
NOTCH3-206ENST00000601011 IGLV4-60A0A075B6I1 120 aa9.12□□□□□ -0.95
NOTCH3-206ENST00000601011 BRI3O95415 125 aa9.12□□□□□ -0.95
NOTCH3-206ENST00000601011 TMEM223A0PJW6 202 aa9.12□□□□□ -0.95
NOTCH3-206ENST00000601011 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 LECT2O14960 151 aa9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 HIGD2BQ4VC39 106 aa9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 WFDC9Q8NEX5 89 aa9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 UBE2D4Q9Y2X8 147 aa9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 CMC4P56277 68 aaPredicted RBP9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 C9orf66Q5T8R8 295 aa9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
NOTCH3-206ENST00000601011 H7C423 109 aa9.1□□□□□ -0.95
NOTCH3-206ENST00000601011 FAM19A4Q96LR4 140 aa9.1□□□□□ -0.95
NOTCH3-206ENST00000601011 APOC4P55056 127 aa9.1□□□□□ -0.95
NOTCH3-206ENST00000601011 IGKV2D-24A0A075B6R9 120 aa9.09□□□□□ -0.95
NOTCH3-206ENST00000601011 UBE2D3P61077 147 aa9.09□□□□□ -0.95
NOTCH3-206ENST00000601011 UBE2D2P62837 147 aa9.09□□□□□ -0.95
NOTCH3-206ENST00000601011 TMEM86BQ8N661 226 aa9.09□□□□□ -0.95
NOTCH3-206ENST00000601011 ODF3Q96PU9 254 aa9.09□□□□□ -0.95
NOTCH3-206ENST00000601011 A0A087WVE0 104 aa9.09□□□□□ -0.95
NOTCH3-206ENST00000601011 SND1-IT1Q9HBX3 110 aa9.09□□□□□ -0.95
NOTCH3-206ENST00000601011 TRAV25A0A0B4J276 109 aa9.08□□□□□ -0.96
NOTCH3-206ENST00000601011 IGHV4-28A0A0C4DH34 117 aa9.08□□□□□ -0.96
NOTCH3-206ENST00000601011 PRR3P79522 188 aaKnown RBP9.08□□□□□ -0.96
NOTCH3-206ENST00000601011 C9orf116Q5BN46 136 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms