RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
ARHGEF1-220ENST00000600274 HILS1P60008 231 aa8.27□□□□□ -1.09
ARHGEF1-220ENST00000600274 SPATA3Q8NHX4 192 aa8.27□□□□□ -1.09
ARHGEF1-220ENST00000600274 ATXN8Q156A1 80 aa8.26□□□□□ -1.09
ARHGEF1-220ENST00000600274 CHCHD5Q9BSY4 110 aa8.26□□□□□ -1.09
ARHGEF1-220ENST00000600274 C11orf68Q9H3H3 251 aaKnown RBP8.26□□□□□ -1.09
ARHGEF1-220ENST00000600274 KMT2BQ9UMN6 2715 aaPredicted RBP8.26□□□□□ -1.09
ARHGEF1-220ENST00000600274 A0A0J9YXY3 114 aa8.26□□□□□ -1.09
ARHGEF1-220ENST00000600274 COX6A2Q02221 97 aa8.26□□□□□ -1.09
ARHGEF1-220ENST00000600274 LINC01620Q4KN68 170 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 CLPSL2Q6UWE3 100 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 STAB1Q9NY15 2570 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 IGLV1-51P01701 117 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 FAM110AQ9BQ89 295 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 PPDPFQ9H3Y8 114 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 IGHV3-33P01772 117 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 GIG44P09565 113 aaPredicted RBP8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 HTN3P15516 51 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 KRTAP10-3P60369 221 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 SPANXA1Q9NS26 97 aa8.25□□□□□ -1.09
ARHGEF1-220ENST00000600274 FAM104AQ969W3 186 aa8.24□□□□□ -1.09
ARHGEF1-220ENST00000600274 AMELXQ99217 191 aa8.24□□□□□ -1.09
ARHGEF1-220ENST00000600274 TRRAPQ9Y4A5 3859 aa8.24□□□□□ -1.09
ARHGEF1-220ENST00000600274 A8MTW9 85 aa8.24□□□□□ -1.09
ARHGEF1-220ENST00000600274 BEAN1Q3B7T3 259 aa8.24□□□□□ -1.09
ARHGEF1-220ENST00000600274 ADAMTSL4-AS1Q5T5F5 129 aa8.24□□□□□ -1.09
ARHGEF1-220ENST00000600274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.24□□□□□ -1.09
ARHGEF1-220ENST00000600274 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
ARHGEF1-220ENST00000600274 M0QXV9 152 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 NTM-AS1Q6ZSK4 140 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 IGHV1-58A0A0C4DH39 117 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 LOC107984640A0A0U1RRK4 108 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 Q9H8V8 135 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 NOTCH1P46531 2555 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 TRIAP1O43715 76 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 UBE2D3P61077 147 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 UBE2D2P62837 147 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 MRPS36P82909 103 aaKnown RBP8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 KLK5Q9Y337 293 aaPredicted RBP8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
ARHGEF1-220ENST00000600274 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
ARHGEF1-220ENST00000600274 IFITM1P13164 125 aa8.22□□□□□ -1.09
ARHGEF1-220ENST00000600274 TMEM101Q96IK0 257 aa8.22□□□□□ -1.09
ARHGEF1-220ENST00000600274 VSIG2Q96IQ7 327 aa8.22□□□□□ -1.09
ARHGEF1-220ENST00000600274 DNAJC30Q96LL9 226 aa8.22□□□□□ -1.09
ARHGEF1-220ENST00000600274 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
ARHGEF1-220ENST00000600274 TMEM243Q9BU79 118 aa8.22□□□□□ -1.09
ARHGEF1-220ENST00000600274 PRIMA1Q86XR5 153 aa8.21□□□□□ -1.09
ARHGEF1-220ENST00000600274 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.1
ARHGEF1-220ENST00000600274 TINCRA0A1B0GVN0 87 aa8.2□□□□□ -1.1
ARHGEF1-220ENST00000600274 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
ARHGEF1-220ENST00000600274 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
ARHGEF1-220ENST00000600274 C16orf95Q9H693 158 aa8.2□□□□□ -1.1
ARHGEF1-220ENST00000600274 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
ARHGEF1-220ENST00000600274 C5orf38Q86SI9 138 aa8.19□□□□□ -1.1
ARHGEF1-220ENST00000600274 ICOSQ9Y6W8 199 aa8.19□□□□□ -1.1
ARHGEF1-220ENST00000600274 CIRBPQ14011 172 aaKnown RBP8.19□□□□□ -1.1
ARHGEF1-220ENST00000600274 C19orf73Q9NVV2 129 aa8.19□□□□□ -1.1
ARHGEF1-220ENST00000600274 DAZ2Q13117 558 aaKnown RBP8.19□□□□□ -1.1
ARHGEF1-220ENST00000600274 DAZ4Q86SG3 579 aaKnown RBP8.19□□□□□ -1.1
ARHGEF1-220ENST00000600274 DAZ3Q9NR90 486 aaKnown RBP8.19□□□□□ -1.1
ARHGEF1-220ENST00000600274 GYPEP15421 78 aa8.18□□□□□ -1.1
ARHGEF1-220ENST00000600274 PLAC8L1A1L4L8 177 aa8.17□□□□□ -1.1
ARHGEF1-220ENST00000600274 CMC4P56277 68 aaPredicted RBP8.17□□□□□ -1.1
ARHGEF1-220ENST00000600274 IGLV4-60A0A075B6I1 120 aa8.17□□□□□ -1.1
ARHGEF1-220ENST00000600274 TRBV10-1A0A0K0K1A3 114 aa8.17□□□□□ -1.1
ARHGEF1-220ENST00000600274 HERVK_113P63121 156 aa8.17□□□□□ -1.1
ARHGEF1-220ENST00000600274 OR13C6PQ8NH95 151 aa8.17□□□□□ -1.1
ARHGEF1-220ENST00000600274 PIK3CD-AS1Q5SR53 167 aa8.16□□□□□ -1.1
ARHGEF1-220ENST00000600274 XCL1P47992 114 aa8.16□□□□□ -1.1
ARHGEF1-220ENST00000600274 EDA2RQ9HAV5 297 aa8.16□□□□□ -1.1
ARHGEF1-220ENST00000600274 PFN2P35080 140 aa8.16□□□□□ -1.1
ARHGEF1-220ENST00000600274 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
ARHGEF1-220ENST00000600274 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.1
ARHGEF1-220ENST00000600274 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.1
ARHGEF1-220ENST00000600274 FAM222AQ5U5X8 452 aa8.15□□□□□ -1.1
ARHGEF1-220ENST00000600274 C9orf153Q5TBE3 101 aa8.15□□□□□ -1.1
ARHGEF1-220ENST00000600274 COL6A5A8TX70 2615 aa8.15□□□□□ -1.11
ARHGEF1-220ENST00000600274 FAM236AA0A1B0GUQ0 79 aa8.15□□□□□ -1.11
ARHGEF1-220ENST00000600274 FAM236BA0A1B0GV22 79 aa8.15□□□□□ -1.11
ARHGEF1-220ENST00000600274 FHL2Q14192 279 aa8.15□□□□□ -1.11
ARHGEF1-220ENST00000600274 CSNK1G2-AS1Q8NCQ2 148 aa8.15□□□□□ -1.11
ARHGEF1-220ENST00000600274 MIAQ16674 131 aa8.14□□□□□ -1.11
ARHGEF1-220ENST00000600274 GAGE2AQ6NT46 116 aa8.14□□□□□ -1.11
ARHGEF1-220ENST00000600274 Q9HAA7 133 aa8.14□□□□□ -1.11
ARHGEF1-220ENST00000600274 NHLRC4P0CG21 123 aaPredicted RBP8.14□□□□□ -1.11
ARHGEF1-220ENST00000600274 IL17DQ8TAD2 202 aa8.14□□□□□ -1.11
ARHGEF1-220ENST00000600274 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
ARHGEF1-220ENST00000600274 LINC00158P58513 81 aa8.13□□□□□ -1.11
ARHGEF1-220ENST00000600274 H7C423 109 aa8.13□□□□□ -1.11
ARHGEF1-220ENST00000600274 LITAFQ99732 161 aa8.13□□□□□ -1.11
ARHGEF1-220ENST00000600274 FBN1P35555 2871 aaKnown RBP8.13□□□□□ -1.11
ARHGEF1-220ENST00000600274 TRBV6-8A0A0A6YYG3 113 aa8.12□□□□□ -1.11
ARHGEF1-220ENST00000600274 NBEAL1Q6ZS30 2694 aa8.12□□□□□ -1.11
ARHGEF1-220ENST00000600274 A0A0B4J2C4 111 aa8.12□□□□□ -1.11
ARHGEF1-220ENST00000600274 TRBV6-4A0A1B0GX49 114 aa8.12□□□□□ -1.11
ARHGEF1-220ENST00000600274 F5H768 121 aa8.12□□□□□ -1.11
ARHGEF1-220ENST00000600274 Q8N3U1 123 aa8.12□□□□□ -1.11
ARHGEF1-220ENST00000600274 PAX4O43316 350 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms