RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	TSC2	P49815	1807 aa		-0.88	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	APC2	O95996	2303 aa		-0.88	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	LAMA5	O15230	3695 aa		-0.89	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	QRICH2	Q9H0J4	1663 aa		-0.89	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	SHROOM2	Q13796	1616 aa		-0.89	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	ROBO1	Q9Y6N7	1651 aa		-0.9	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	COMMD6	Q7Z4G1	85 aa		-0.9	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	C5orf38	Q86SI9	138 aa		-0.9	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	SETD2	Q9BYW2	2564 aa	Predicted RBP	-0.9	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	BTAF1	O14981	1849 aa		-0.91	□□□□□ -2.55
SOX2-OT-231	ENST00000599082	SSSCA1	O60232	199 aa		-0.91	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	KRTAP19-8	Q3LI54	63 aa		-0.91	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	IFNG	P01579	166 aa		-0.92	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	LINC00474	Q9P2X8	69 aa		-0.92	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	SON	P18583	2426 aa	Known RBP	-0.92	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	MYOM1	P52179	1685 aa		-0.92	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	RAPGEF6	Q8TEU7	1601 aa		-0.93	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	LOC285095	A0A1B0GVY8	99 aa		-0.93	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	SETX	Q7Z333	2677 aa	Known RBP	-0.93	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	ABCA13	Q86UQ4	5058 aa		-0.94	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	SFT2D2	O95562	160 aa		-0.94	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	TNF	P01375	233 aa		-0.94	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	C1orf54	Q8WWF1	131 aa		-0.94	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	SHANK2	Q9UPX8	1470 aa		-0.95	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	PRKDC	P78527	4128 aa	Known RBP	-0.95	□□□□□ -2.56
SOX2-OT-231	ENST00000599082		K7EQZ3	153 aa		-0.96	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	AKAIN1	P0CW23	69 aa		-0.96	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	MRPL54	Q6P161	138 aa	Known RBP	-0.96	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	OOSP1	A8MZH6	123 aa		-0.97	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	LAMA2	P24043	3122 aa	Known RBP	-0.97	□□□□□ -2.56
SOX2-OT-231	ENST00000599082	CHD8	Q9HCK8	2581 aa		-0.98	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	A2ML1	A8K2U0	1454 aa		-0.98	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	WDR7	Q9Y4E6	1490 aa		-0.98	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	ARHGEF5	Q12774	1597 aa		-0.98	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	COX6B1	P14854	86 aa		-0.98	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	MYOZ3	Q8TDC0	251 aa		-0.98	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	PP6455	Q8WZ26	134 aa		-0.98	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	EP300	Q09472	2414 aa	Predicted RBP	-0.99	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	SPRR1B	P22528	89 aa		-0.99	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	URB1	O60287	2271 aa	Known RBP	-0.99	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	DSP	P15924	2871 aa	Known RBP	-0.99	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	STAB2	Q8WWQ8	2551 aa		-1	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	CHKB-CPT1B	H3BT56	60 aa		-1	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	KTN1	Q86UP2	1357 aa	Known RBP	-1	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	NSD3	Q9BZ95	1437 aa		-1	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	ARHGEF12	Q9NZN5	1544 aa		-1	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	COL6A3	P12111	3177 aa		-1	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	ACAN	P16112	2415 aa		-1.01	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	DEFB123	Q8N688	67 aa		-1.01	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	KDM5A	P29375	1690 aa	Known RBP	-1.01	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	CUL7	Q14999	1698 aa		-1.01	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	ROCK2	O75116	1388 aa	Known RBP	-1.02	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	MGP	P08493	103 aa		-1.02	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	BIRC6	Q9NR09	4857 aa		-1.03	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	SMG6	Q86US8	1419 aa	Known RBP	-1.03	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	TG	P01266	2768 aa		-1.03	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	NXT2	Q9NPJ8	142 aa	Known RBP	-1.03	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	CDC42SE2	Q9NRR3	84 aa		-1.03	□□□□□ -2.57
SOX2-OT-231	ENST00000599082	IGLC1	P0CG04	106 aa		-1.04	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	C9orf153	Q5TBE3	101 aa		-1.04	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	TMEM263	Q8WUH6	116 aa	Known RBP	-1.04	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	FAT3	Q8TDW7	4589 aa		-1.05	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	POLA1	P09884	1462 aa	Predicted RBP	-1.05	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	NALCN	Q8IZF0	1738 aa		-1.05	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	SPRR4	Q96PI1	79 aa		-1.05	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	UBE2L5P	A0A1B0GUS4	154 aa		-1.06	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	UBE2L3	P68036	154 aa	Known RBP	-1.06	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	UQCR10	Q9UDW1	63 aa		-1.06	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	COL6A5	A8TX70	2615 aa		-1.06	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	FAIM	Q9NVQ4	179 aa		-1.07	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	NBEAL2	Q6ZNJ1	2754 aa		-1.07	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	TET3	O43151	1660 aa		-1.07	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	NIPBL	Q6KC79	2804 aa	eCLIP	-1.07	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	NBEAL1	Q6ZS30	2694 aa		-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	DNAJC13	O75165	2243 aa		-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	FLNB	O75369	2602 aa	Known RBP	-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	USP9X	Q93008	2570 aa	Predicted RBP	-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	EPG5	Q9HCE0	2579 aa		-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	C10orf113	Q5VZT2	155 aa		-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	GAPVD1	Q14C86	1478 aa		-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	LRP1B	Q9NZR2	4599 aa		-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	DNHD1	Q96M86	4753 aa		-1.08	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	HMGXB3	Q12766	1538 aa		-1.09	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	TULP4	Q9NRJ4	1543 aa		-1.09	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	MAP1A	P78559	2803 aa	Predicted RBP	-1.09	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	HECTD1	Q9ULT8	2610 aa		-1.09	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	DPH3P1	Q9H4G8	78 aa		-1.09	□□□□□ -2.58
SOX2-OT-231	ENST00000599082	RPL13AP3	Q6NVV1	102 aa		-1.1	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	FAM223A	Q8IWN6	122 aa		-1.1	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	ARL2-SNX15	V9GYD0	113 aa		-1.1	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	WHAMMP3	Q1A5X7	153 aa		-1.11	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	CELSR3	Q9NYQ7	3312 aa		-1.12	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	SNAPC5	O75971	98 aa		-1.12	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	SPRR2B	P35325	72 aa		-1.12	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	FAM167A-AS1	Q96KT0	104 aa		-1.12	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	WDR87	Q6ZQQ6	2873 aa		-1.12	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	COL12A1	Q99715	3063 aa		-1.12	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	MYOM2	P54296	1465 aa		-1.12	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	MAGI1	Q96QZ7	1491 aa	Predicted RBP	-1.12	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	USP9Y	O00507	2555 aa	Predicted RBP	-1.12	□□□□□ -2.59

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms