RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 KLK9Q9UKQ9 250 aa2.93□□□□□ -1.94
PAF1-208ENST00000598594 UBE2D4Q9Y2X8 147 aa2.93□□□□□ -1.94
PAF1-208ENST00000598594 RICTORQ6R327 1708 aa2.93□□□□□ -1.94
PAF1-208ENST00000598594 M0R3E3 92 aa2.92□□□□□ -1.94
PAF1-208ENST00000598594 CCL18P55774 89 aa2.92□□□□□ -1.94
PAF1-208ENST00000598594 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
PAF1-208ENST00000598594 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
PAF1-208ENST00000598594 KRTAP1-5Q9BYS1 174 aa2.92□□□□□ -1.94
PAF1-208ENST00000598594 KIAA0556O60303 1618 aa2.92□□□□□ -1.94
PAF1-208ENST00000598594 ZNF831Q5JPB2 1677 aa2.92□□□□□ -1.94
PAF1-208ENST00000598594 TRBV6-5A0A0K0K1A5 114 aa2.91□□□□□ -1.94
PAF1-208ENST00000598594 IGLV6-57P01721 117 aa2.91□□□□□ -1.94
PAF1-208ENST00000598594 RNASE3P12724 160 aaKnown RBP2.91□□□□□ -1.94
PAF1-208ENST00000598594 RPL37AP61513 92 aaKnown RBP2.91□□□□□ -1.94
PAF1-208ENST00000598594 ZNF563Q8TA94 476 aa2.91□□□□□ -1.94
PAF1-208ENST00000598594 FAM103A1Q9BTL3 118 aaKnown RBP2.91□□□□□ -1.94
PAF1-208ENST00000598594 TTTY12Q9BZ98 90 aa2.91□□□□□ -1.94
PAF1-208ENST00000598594 DNAJC13O75165 2243 aa2.91□□□□□ -1.94
PAF1-208ENST00000598594 FMN2Q9NZ56 1722 aa2.9□□□□□ -1.94
PAF1-208ENST00000598594 A0A087WVE0 104 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 FXYD6-FXYD2A0A087WZ82 144 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 LRCOL1A6NCL2 159 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 SPINK14Q6IE38 97 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 FXYD6Q9H0Q3 95 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 TP53TG3Q9ULZ0 132 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 PRRC2BQ5JSZ5 2229 aaKnown RBP2.9□□□□□ -1.95
PAF1-208ENST00000598594 FREM1Q5H8C1 2179 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 ALPK2Q86TB3 2170 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 DOCK10Q96BY6 2186 aa2.9□□□□□ -1.95
PAF1-208ENST00000598594 A0A1W2PNN7 141 aa2.89□□□□□ -1.95
PAF1-208ENST00000598594 IGLV3-19P01714 112 aa2.89□□□□□ -1.95
PAF1-208ENST00000598594 IL9P15248 144 aa2.89□□□□□ -1.95
PAF1-208ENST00000598594 VWDEQ8N2E2 1590 aa2.89□□□□□ -1.95
PAF1-208ENST00000598594 SNURFQ9Y675 71 aa2.89□□□□□ -1.95
PAF1-208ENST00000598594 V9GYV3 84 aa2.89□□□□□ -1.95
PAF1-208ENST00000598594 LRP6O75581 1613 aa2.89□□□□□ -1.95
PAF1-208ENST00000598594 PHRF1Q9P1Y6 1649 aaKnown RBP2.89□□□□□ -1.95
PAF1-208ENST00000598594 NBDYA0A0U1RRE5 68 aa2.88□□□□□ -1.95
PAF1-208ENST00000598594 M0R135 149 aa2.88□□□□□ -1.95
PAF1-208ENST00000598594 FXYD3Q14802 87 aa2.88□□□□□ -1.95
PAF1-208ENST00000598594 DEFB132Q7Z7B7 95 aa2.88□□□□□ -1.95
PAF1-208ENST00000598594 BIVM-ERCC5R4GMW8 1640 aa2.88□□□□□ -1.95
PAF1-208ENST00000598594 ATP7BP35670 1465 aa2.88□□□□□ -1.95
PAF1-208ENST00000598594 NRAPQ86VF7 1730 aa2.88□□□□□ -1.95
PAF1-208ENST00000598594 SHANK1Q9Y566 2161 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 NHSL1Q5SYE7 1610 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 IGKV2-40A0A087WW87 121 aaPredicted RBP2.87□□□□□ -1.95
PAF1-208ENST00000598594 A0A0D9SFI3 127 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 CTXND1A0A1B0GTU2 59 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 H3BRN7 92 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 IGKV2D-40P01614 121 aaPredicted RBP2.87□□□□□ -1.95
PAF1-208ENST00000598594 S100A3P33764 101 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 LINC00315P59091 139 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 KRTAP10-6P60371 365 aaPredicted RBP2.87□□□□□ -1.95
PAF1-208ENST00000598594 ATXN8Q156A1 80 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 TMEM14CQ9P0S9 112 aa2.87□□□□□ -1.95
PAF1-208ENST00000598594 NCOA6Q14686 2063 aaPredicted RBP2.87□□□□□ -1.95
PAF1-208ENST00000598594 ABCA5Q8WWZ7 1642 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 EIF2AK4Q9P2K8 1649 aaKnown RBP2.86□□□□□ -1.95
PAF1-208ENST00000598594 POLR1AO95602 1720 aaPredicted RBP2.86□□□□□ -1.95
PAF1-208ENST00000598594 IGKV2-28A0A075B6P5 120 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 A0A087WTM6 91 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 TRBV7-4A0A0J9YYF1 115 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 IGKV2-29A2NJV5 120 aaPredicted RBP2.86□□□□□ -1.95
PAF1-208ENST00000598594 SNRPGP15A8MWD9 76 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 UQCR11O14957 56 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 IGKV2D-28P01615 120 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 LINC00304Q8N9R0 145 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 PAPPA2Q9BXP8 1791 aa2.86□□□□□ -1.95
PAF1-208ENST00000598594 TRGV4A0A0C4DH28 118 aa2.85□□□□□ -1.95
PAF1-208ENST00000598594 C5orf56Q8N8D9 126 aa2.85□□□□□ -1.95
PAF1-208ENST00000598594 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
PAF1-208ENST00000598594 PRRC2AP48634 2157 aaKnown RBP2.85□□□□□ -1.95
PAF1-208ENST00000598594 RTTNQ86VV8 2226 aa2.85□□□□□ -1.95
PAF1-208ENST00000598594 MGPP08493 103 aa2.84□□□□□ -1.95
PAF1-208ENST00000598594 KRTAP13-2Q52LG2 175 aa2.84□□□□□ -1.95
PAF1-208ENST00000598594 HCP5Q6MZN7 132 aa2.84□□□□□ -1.95
PAF1-208ENST00000598594 LINC00322Q6ZN03 302 aaPredicted RBP2.84□□□□□ -1.95
PAF1-208ENST00000598594 DEFB107AQ8IZN7 70 aa2.84□□□□□ -1.95
PAF1-208ENST00000598594 CYYR1Q96J86 154 aa2.84□□□□□ -1.95
PAF1-208ENST00000598594 TJP1Q07157 1748 aa2.84□□□□□ -1.96
PAF1-208ENST00000598594 C3P01024 1663 aa2.83□□□□□ -1.96
PAF1-208ENST00000598594 SDK1Q7Z5N4 2213 aa2.83□□□□□ -1.96
PAF1-208ENST00000598594 WFDC6Q9BQY6 131 aa2.83□□□□□ -1.96
PAF1-208ENST00000598594 FN1P02751 2386 aaKnown RBP2.82□□□□□ -1.96
PAF1-208ENST00000598594 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.82□□□□□ -1.96
PAF1-208ENST00000598594 A0A1B0GUT8 65 aa2.82□□□□□ -1.96
PAF1-208ENST00000598594 ZNF137PP52743 207 aa2.82□□□□□ -1.96
PAF1-208ENST00000598594 INTS1Q8N201 2190 aaKnown RBP2.81□□□□□ -1.96
PAF1-208ENST00000598594 KRTAP1-4P0C5Y4 121 aa2.81□□□□□ -1.96
PAF1-208ENST00000598594 FXYD4P59646 89 aa2.81□□□□□ -1.96
PAF1-208ENST00000598594 PRR9Q5T870 116 aa2.81□□□□□ -1.96
PAF1-208ENST00000598594 GDF5OSQ5U4N7 250 aa2.81□□□□□ -1.96
PAF1-208ENST00000598594 LINC00208Q96KT6 92 aa2.81□□□□□ -1.96
PAF1-208ENST00000598594 LINC00846Q9NV44 126 aa2.81□□□□□ -1.96
PAF1-208ENST00000598594 PLAC8Q9NZF1 115 aa2.81□□□□□ -1.96
PAF1-208ENST00000598594 LY75O60449 1722 aa2.81□□□□□ -1.96
PAF1-208ENST00000598594 CPS1P31327 1500 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms