RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 C2orf88Q9BSF0 95 aa9.06□□□□□ -0.96
PRKD2-208ENST00000597390 C1orf43Q9BWL3 253 aa9.06□□□□□ -0.96
PRKD2-208ENST00000597390 LRP1BQ9NZR2 4599 aa9.06□□□□□ -0.96
PRKD2-208ENST00000597390 IGKV2D-24A0A075B6R9 120 aa9.05□□□□□ -0.96
PRKD2-208ENST00000597390 SS18Q15532 418 aa9.05□□□□□ -0.96
PRKD2-208ENST00000597390 LINC00242Q5T6M2 205 aa9.05□□□□□ -0.96
PRKD2-208ENST00000597390 FAM19A3Q7Z5A8 133 aa9.05□□□□□ -0.96
PRKD2-208ENST00000597390 TMA7Q9Y2S6 64 aaKnown RBP9.05□□□□□ -0.96
PRKD2-208ENST00000597390 XCL1P47992 114 aa9.04□□□□□ -0.96
PRKD2-208ENST00000597390 FOXI1Q12951 378 aa9.04□□□□□ -0.96
PRKD2-208ENST00000597390 SPATA12Q7Z6I5 190 aa9.04□□□□□ -0.96
PRKD2-208ENST00000597390 RMI2Q96E14 147 aa9.04□□□□□ -0.96
PRKD2-208ENST00000597390 HIST1H2BLQ99880 126 aa9.04□□□□□ -0.96
PRKD2-208ENST00000597390 TRAV12-1A0A0B4J245 112 aa9.03□□□□□ -0.96
PRKD2-208ENST00000597390 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
PRKD2-208ENST00000597390 PRSS1P07477 247 aa9.03□□□□□ -0.96
PRKD2-208ENST00000597390 COX6A2Q02221 97 aa9.03□□□□□ -0.96
PRKD2-208ENST00000597390 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
PRKD2-208ENST00000597390 COX11Q9Y6N1 276 aa9.03□□□□□ -0.96
PRKD2-208ENST00000597390 HERC1Q15751 4861 aa9.02□□□□□ -0.96
PRKD2-208ENST00000597390 DNAH5Q8TE73 4624 aa9.02□□□□□ -0.96
PRKD2-208ENST00000597390 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.97
PRKD2-208ENST00000597390 IGHV3OR16-9A0A0B4J2B5 98 aa9.02□□□□□ -0.97
PRKD2-208ENST00000597390 A0A0J9YXV3 536 aa9.02□□□□□ -0.97
PRKD2-208ENST00000597390 CD164L2Q6UWJ8 174 aa9.02□□□□□ -0.97
PRKD2-208ENST00000597390 HSPG2P98160 4391 aa9.02□□□□□ -0.97
PRKD2-208ENST00000597390 ODF1Q14990 250 aa9.01□□□□□ -0.97
PRKD2-208ENST00000597390 MAP1LC3CQ9BXW4 147 aa9.01□□□□□ -0.97
PRKD2-208ENST00000597390 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
PRKD2-208ENST00000597390 SYS1-DBNDD2H3BUS1 97 aa9□□□□□ -0.97
PRKD2-208ENST00000597390 CDK2AP2O75956 126 aa9□□□□□ -0.97
PRKD2-208ENST00000597390 C3orf79P0CE67 100 aa9□□□□□ -0.97
PRKD2-208ENST00000597390 IGLC3P0DOY3 106 aa9□□□□□ -0.97
PRKD2-208ENST00000597390 S100A2P29034 98 aa9□□□□□ -0.97
PRKD2-208ENST00000597390 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 H0Y8G0 127 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 WFDC2Q14508 124 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 MRPL35Q9NZE8 188 aaKnown RBP8.99□□□□□ -0.97
PRKD2-208ENST00000597390 CHTOPQ9Y3Y2 248 aaKnown RBP8.99□□□□□ -0.97
PRKD2-208ENST00000597390 F8VRH5 84 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 EREGO14944 169 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 PSCAO43653 123 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 APOBP04114 4563 aaKnown RBP8.99□□□□□ -0.97
PRKD2-208ENST00000597390 HERVK_113P63121 156 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 SEC11AP67812 179 aa8.99□□□□□ -0.97
PRKD2-208ENST00000597390 A0A087WZ39 114 aa8.98□□□□□ -0.97
PRKD2-208ENST00000597390 C11orf86A6NJI1 115 aa8.98□□□□□ -0.97
PRKD2-208ENST00000597390 COX7A2LO14548 114 aa8.98□□□□□ -0.97
PRKD2-208ENST00000597390 KRTDAPP60985 99 aa8.98□□□□□ -0.97
PRKD2-208ENST00000597390 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
PRKD2-208ENST00000597390 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
PRKD2-208ENST00000597390 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
PRKD2-208ENST00000597390 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
PRKD2-208ENST00000597390 LECT2O14960 151 aa8.97□□□□□ -0.97
PRKD2-208ENST00000597390 LINC01545Q5VT33 79 aa8.97□□□□□ -0.97
PRKD2-208ENST00000597390 PET117Q6UWS5 81 aa8.97□□□□□ -0.97
PRKD2-208ENST00000597390 C15orf56Q8N910 161 aa8.97□□□□□ -0.97
PRKD2-208ENST00000597390 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
PRKD2-208ENST00000597390 A0A087WTM6 91 aa8.96□□□□□ -0.98
PRKD2-208ENST00000597390 USP17L23D6RBM5 183 aa8.96□□□□□ -0.98
PRKD2-208ENST00000597390 ZNF22P17026 224 aaPredicted RBP8.96□□□□□ -0.98
PRKD2-208ENST00000597390 PGPEP1Q9NXJ5 209 aa8.96□□□□□ -0.98
PRKD2-208ENST00000597390 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
PRKD2-208ENST00000597390 LINC00469Q8N7U9 141 aa8.95□□□□□ -0.98
PRKD2-208ENST00000597390 PLNP26678 52 aa8.94□□□□□ -0.98
PRKD2-208ENST00000597390 LINC01561Q8N1V8 128 aa8.94□□□□□ -0.98
PRKD2-208ENST00000597390 IGHV3-64A0A075B6Q5 118 aa8.93□□□□□ -0.98
PRKD2-208ENST00000597390 IGHV1-58A0A0C4DH39 117 aa8.93□□□□□ -0.98
PRKD2-208ENST00000597390 DPM2O94777 84 aa8.93□□□□□ -0.98
PRKD2-208ENST00000597390 MALP21145 153 aa8.93□□□□□ -0.98
PRKD2-208ENST00000597390 OR10D4PQ8NGN7 298 aa8.93□□□□□ -0.98
PRKD2-208ENST00000597390 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
PRKD2-208ENST00000597390 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
PRKD2-208ENST00000597390 IGKCP01834 107 aa8.91□□□□□ -0.98
PRKD2-208ENST00000597390 TMEM170BQ5T4T1 132 aa8.91□□□□□ -0.98
PRKD2-208ENST00000597390 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
PRKD2-208ENST00000597390 Q8N814 137 aa8.91□□□□□ -0.98
PRKD2-208ENST00000597390 NTN5Q8WTR8 489 aaPredicted RBP8.91□□□□□ -0.98
PRKD2-208ENST00000597390 IGLV5-39A0A0G2JS06 123 aa8.9□□□□□ -0.98
PRKD2-208ENST00000597390 TMEM223A0PJW6 202 aa8.9□□□□□ -0.98
PRKD2-208ENST00000597390 H3BRM9 83 aa8.9□□□□□ -0.98
PRKD2-208ENST00000597390 APOMO95445 188 aa8.9□□□□□ -0.98
PRKD2-208ENST00000597390 SPINK8P0C7L1 97 aa8.9□□□□□ -0.98
PRKD2-208ENST00000597390 KIAA0087Q14695 138 aa8.9□□□□□ -0.98
PRKD2-208ENST00000597390 HIGD2BQ4VC39 106 aa8.9□□□□□ -0.98
PRKD2-208ENST00000597390 SLPIP03973 132 aa8.89□□□□□ -0.99
PRKD2-208ENST00000597390 FUSP35637 526 aaKnown RBP eCLIP8.89□□□□□ -0.99
PRKD2-208ENST00000597390 Q8N1X5 172 aa8.89□□□□□ -0.99
PRKD2-208ENST00000597390 ORAOV1Q8WV07 137 aa8.89□□□□□ -0.99
PRKD2-208ENST00000597390 LINC00526Q96FQ7 95 aa8.89□□□□□ -0.99
PRKD2-208ENST00000597390 hDV102S1A0JD36 115 aa8.88□□□□□ -0.99
PRKD2-208ENST00000597390 C20orf202A1L168 122 aa8.88□□□□□ -0.99
PRKD2-208ENST00000597390 C14orf177Q52M58 125 aa8.88□□□□□ -0.99
PRKD2-208ENST00000597390 SPAG11BQ08648 103 aa8.87□□□□□ -0.99
PRKD2-208ENST00000597390 UBR4Q5T4S7 5183 aa8.87□□□□□ -0.99
PRKD2-208ENST00000597390 Q8IZM0 81 aa8.86□□□□□ -0.99
PRKD2-208ENST00000597390 ATOH7Q8N100 152 aa8.86□□□□□ -0.99
PRKD2-208ENST00000597390 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms