RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 ATP5J2P56134 94 aa12.7□□□□□ -0.38
H3F3B-211ENST00000591893 RPL18AQ02543 176 aaKnown RBP12.7□□□□□ -0.38
H3F3B-211ENST00000591893 C5orf47Q569G3 176 aa12.7□□□□□ -0.38
H3F3B-211ENST00000591893 CREBBPQ92793 2442 aa12.7□□□□□ -0.38
H3F3B-211ENST00000591893 MYO9AB2RTY4 2548 aa12.7□□□□□ -0.38
H3F3B-211ENST00000591893 TMEM89A2RUT3 159 aa12.69□□□□□ -0.38
H3F3B-211ENST00000591893 RPS28P62857 69 aaKnown RBP12.69□□□□□ -0.38
H3F3B-211ENST00000591893 SMIM9A6NGZ8 99 aa12.69□□□□□ -0.38
H3F3B-211ENST00000591893 OVOL2Q9BRP0 275 aa12.69□□□□□ -0.38
H3F3B-211ENST00000591893 LINC00337Q8N6G1 96 aa12.69□□□□□ -0.38
H3F3B-211ENST00000591893 CYSTM1Q9H1C7 97 aa12.69□□□□□ -0.38
H3F3B-211ENST00000591893 C14orf132Q9NPU4 83 aa12.69□□□□□ -0.38
H3F3B-211ENST00000591893 C9orf129Q5T035 196 aaKnown RBP12.68□□□□□ -0.38
H3F3B-211ENST00000591893 BBC3Q96PG8 261 aaPredicted RBP12.68□□□□□ -0.38
H3F3B-211ENST00000591893 TENM4Q6N022 2769 aa12.68□□□□□ -0.38
H3F3B-211ENST00000591893 IGKV3D-7A0A0C4DH55 119 aa12.68□□□□□ -0.38
H3F3B-211ENST00000591893 A0A087WYN8 130 aa12.67□□□□□ -0.38
H3F3B-211ENST00000591893 NF1P21359 2839 aa12.67□□□□□ -0.38
H3F3B-211ENST00000591893 ACANP16112 2415 aa12.67□□□□□ -0.38
H3F3B-211ENST00000591893 HELZ2Q9BYK8 2649 aaKnown RBP12.67□□□□□ -0.38
H3F3B-211ENST00000591893 Q6JHZ5 121 aa12.66□□□□□ -0.38
H3F3B-211ENST00000591893 MAPK1IP1LQ8NDC0 245 aa12.66□□□□□ -0.38
H3F3B-211ENST00000591893 IGKV2-28A0A075B6P5 120 aa12.66□□□□□ -0.38
H3F3B-211ENST00000591893 IGKV2D-28P01615 120 aa12.66□□□□□ -0.38
H3F3B-211ENST00000591893 IGHV4-59P01825 116 aa12.66□□□□□ -0.38
H3F3B-211ENST00000591893 AVPP01185 164 aa12.65□□□□□ -0.38
H3F3B-211ENST00000591893 C10orf105Q8TEF2 133 aa12.65□□□□□ -0.38
H3F3B-211ENST00000591893 Q96MF0 132 aa12.65□□□□□ -0.38
H3F3B-211ENST00000591893 SND1-IT1Q9HBX3 110 aa12.65□□□□□ -0.38
H3F3B-211ENST00000591893 MSMBP08118 114 aa12.65□□□□□ -0.38
H3F3B-211ENST00000591893 MIR7-3HGQ8N6C7 128 aa12.65□□□□□ -0.38
H3F3B-211ENST00000591893 CDC42SE2Q9NRR3 84 aa12.65□□□□□ -0.38
H3F3B-211ENST00000591893 LINC00846Q9NV44 126 aa12.65□□□□□ -0.38
H3F3B-211ENST00000591893 SMIM11BQ8TCY0 68 aa12.64□□□□□ -0.39
H3F3B-211ENST00000591893 NTM-AS1Q6ZSK4 140 aa12.64□□□□□ -0.39
H3F3B-211ENST00000591893 SERP2Q8N6R1 65 aa12.64□□□□□ -0.39
H3F3B-211ENST00000591893 OBSCN-AS1Q96MR7 158 aa12.64□□□□□ -0.39
H3F3B-211ENST00000591893 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
H3F3B-211ENST00000591893 A0A087WVE0 104 aa12.63□□□□□ -0.39
H3F3B-211ENST00000591893 TMEM258P61165 79 aa12.63□□□□□ -0.39
H3F3B-211ENST00000591893 APCP25054 2843 aa12.62□□□□□ -0.39
H3F3B-211ENST00000591893 UBR5O95071 2799 aaPredicted RBP12.62□□□□□ -0.39
H3F3B-211ENST00000591893 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
H3F3B-211ENST00000591893 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
H3F3B-211ENST00000591893 MTORP42345 2549 aa12.62□□□□□ -0.39
H3F3B-211ENST00000591893 H0YGX0 51 aa12.61□□□□□ -0.39
H3F3B-211ENST00000591893 INSP01308 110 aa12.61□□□□□ -0.39
H3F3B-211ENST00000591893 UPK3BQ9BT76 320 aa12.61□□□□□ -0.39
H3F3B-211ENST00000591893 ITPR2Q14571 2701 aa12.61□□□□□ -0.39
H3F3B-211ENST00000591893 IGHV4-30-2A0A087WSY4 118 aa12.61□□□□□ -0.39
H3F3B-211ENST00000591893 DEFB112Q30KQ8 113 aa12.61□□□□□ -0.39
H3F3B-211ENST00000591893 LINC01561Q8N1V8 128 aa12.6□□□□□ -0.39
H3F3B-211ENST00000591893 KIR2DL5BQ8NHK3 375 aa12.6□□□□□ -0.39
H3F3B-211ENST00000591893 DPH3Q96FX2 82 aa12.6□□□□□ -0.39
H3F3B-211ENST00000591893 UBE2E2Q96LR5 201 aa12.6□□□□□ -0.39
H3F3B-211ENST00000591893 SLURP1P55000 103 aa12.6□□□□□ -0.39
H3F3B-211ENST00000591893 COX7B2Q8TF08 81 aa12.6□□□□□ -0.39
H3F3B-211ENST00000591893 HECTD1Q9ULT8 2610 aa12.6□□□□□ -0.39
H3F3B-211ENST00000591893 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
H3F3B-211ENST00000591893 LECT2O14960 151 aa12.59□□□□□ -0.39
H3F3B-211ENST00000591893 MAP6D1Q9H9H5 199 aa12.59□□□□□ -0.39
H3F3B-211ENST00000591893 TRGV1A0A0A0MS02 117 aa12.58□□□□□ -0.39
H3F3B-211ENST00000591893 K7EQD1 137 aa12.58□□□□□ -0.39
H3F3B-211ENST00000591893 NCR3O14931 201 aa12.58□□□□□ -0.4
H3F3B-211ENST00000591893 LINC00158P58513 81 aa12.58□□□□□ -0.4
H3F3B-211ENST00000591893 DEFB136Q30KP8 78 aa12.58□□□□□ -0.4
H3F3B-211ENST00000591893 TOMM7Q9P0U1 55 aa12.58□□□□□ -0.4
H3F3B-211ENST00000591893 TRBV10-1A0A0K0K1A3 114 aa12.58□□□□□ -0.4
H3F3B-211ENST00000591893 CCL19Q99731 98 aa12.57□□□□□ -0.4
H3F3B-211ENST00000591893 CCL18P55774 89 aa12.57□□□□□ -0.4
H3F3B-211ENST00000591893 UBE2L6O14933 153 aa12.56□□□□□ -0.4
H3F3B-211ENST00000591893 FASNP49327 2511 aaKnown RBP12.56□□□□□ -0.4
H3F3B-211ENST00000591893 XCL2Q9UBD3 114 aa12.56□□□□□ -0.4
H3F3B-211ENST00000591893 C18orf65Q6ZTR6 163 aa12.55□□□□□ -0.4
H3F3B-211ENST00000591893 DSCR8Q96T75 97 aa12.55□□□□□ -0.4
H3F3B-211ENST00000591893 B4DSR2 109 aa12.54□□□□□ -0.4
H3F3B-211ENST00000591893 SLPIP03973 132 aa12.54□□□□□ -0.4
H3F3B-211ENST00000591893 TMEM243Q9BU79 118 aa12.54□□□□□ -0.4
H3F3B-211ENST00000591893 FLNAP21333 2647 aaKnown RBP12.53□□□□□ -0.4
H3F3B-211ENST00000591893 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
H3F3B-211ENST00000591893 IL17DQ8TAD2 202 aa12.52□□□□□ -0.4
H3F3B-211ENST00000591893 OXTP01178 125 aa12.52□□□□□ -0.41
H3F3B-211ENST00000591893 Q6ZTI0 123 aa12.52□□□□□ -0.41
H3F3B-211ENST00000591893 ORMDL1Q9P0S3 153 aa12.51□□□□□ -0.41
H3F3B-211ENST00000591893 PAX4O43316 350 aa12.51□□□□□ -0.41
H3F3B-211ENST00000591893 ZNF702PQ9H963 129 aa12.51□□□□□ -0.41
H3F3B-211ENST00000591893 ITPR3Q14573 2671 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 IGKV3OR2-268A0A0C4DH90 116 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 IBA57-AS1B1ANH7 110 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 CCKP06307 115 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 PFN2P35080 140 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 SS18Q15532 418 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 C1orf158Q8N1D5 194 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 DYNLRB2Q8TF09 96 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 C2CD3Q4AC94 2353 aa12.5□□□□□ -0.41
H3F3B-211ENST00000591893 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
H3F3B-211ENST00000591893 WNK1Q9H4A3 2382 aa12.48□□□□□ -0.41
H3F3B-211ENST00000591893 HILS1P60008 231 aa12.47□□□□□ -0.41
H3F3B-211ENST00000591893 WIPF1O43516 503 aa12.47□□□□□ -0.41
H3F3B-211ENST00000591893 GCN1Q92616 2671 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms