RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 MIAQ16674 131 aa4.27□□□□□ -1.73
VPS4B-205ENST00000591383 CD164L2Q6UWJ8 174 aa4.27□□□□□ -1.73
VPS4B-205ENST00000591383 C2orf66Q6UXQ4 117 aa4.27□□□□□ -1.73
VPS4B-205ENST00000591383 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
VPS4B-205ENST00000591383 LINC00336Q6ZUF6 198 aa4.27□□□□□ -1.73
VPS4B-205ENST00000591383 MRPL52Q86TS9 123 aaKnown RBP4.27□□□□□ -1.73
VPS4B-205ENST00000591383 UBE2D4Q9Y2X8 147 aa4.27□□□□□ -1.73
VPS4B-205ENST00000591383 PKD1P98161 4303 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 TRAV13-1A0A0B4J241 112 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 A0A1B0GUV1 79 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 COLCA2A8K830 154 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 XCL1P47992 114 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 PMCHL1Q16048 86 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 ENHOQ6UWT2 76 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 Q6ZN92 141 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 BAGE3Q86Y29 109 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 ZNF664Q8N3J9 261 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 PRR34Q9NV39 138 aa4.26□□□□□ -1.73
VPS4B-205ENST00000591383 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
VPS4B-205ENST00000591383 K7EMI3 77 aa4.25□□□□□ -1.73
VPS4B-205ENST00000591383 RAB5BP61020 215 aa4.25□□□□□ -1.73
VPS4B-205ENST00000591383 CHCHD10Q8WYQ3 142 aaPredicted RBP4.25□□□□□ -1.73
VPS4B-205ENST00000591383 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
VPS4B-205ENST00000591383 C2orf88Q9BSF0 95 aa4.25□□□□□ -1.73
VPS4B-205ENST00000591383 TIMM21Q9BVV7 248 aa4.25□□□□□ -1.73
VPS4B-205ENST00000591383 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
VPS4B-205ENST00000591383 CDC42SE2Q9NRR3 84 aa4.25□□□□□ -1.73
VPS4B-205ENST00000591383 A0A087WTM6 91 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 IGLV9-49A0A0B4J1Y8 123 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 TRAV8-4A0A0B4J246 113 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 A0A0U1RRA0 63 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 LINC00959A0A1B0GUT2 108 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 F8WDY8 70 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 CCL25O15444 150 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 HBDP02042 147 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 G0S2P27469 103 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 WFDC2Q14508 124 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 SS18Q15532 418 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 ZC2HC1BQ5TFG8 222 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 TEX43Q6ZNM6 134 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 BAALCQ8WXS3 180 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 TOMM6Q96B49 74 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 TMEM141Q96I45 108 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 SCGB3A1Q96QR1 104 aa4.24□□□□□ -1.73
VPS4B-205ENST00000591383 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.23□□□□□ -1.73
VPS4B-205ENST00000591383 HSBP1O75506 76 aa4.23□□□□□ -1.73
VPS4B-205ENST00000591383 SERF1AO75920 110 aa4.23□□□□□ -1.73
VPS4B-205ENST00000591383 LINC00614P0C842 121 aa4.23□□□□□ -1.73
VPS4B-205ENST00000591383 FUSP35637 526 aaKnown RBP eCLIP4.23□□□□□ -1.73
VPS4B-205ENST00000591383 MRPS36P82909 103 aaKnown RBP4.23□□□□□ -1.73
VPS4B-205ENST00000591383 SPATA12Q7Z6I5 190 aa4.23□□□□□ -1.73
VPS4B-205ENST00000591383 CHCHD1Q96BP2 118 aaKnown RBP4.23□□□□□ -1.73
VPS4B-205ENST00000591383 TIMM17AQ99595 171 aa4.23□□□□□ -1.73
VPS4B-205ENST00000591383 CSDC2Q9Y534 153 aaKnown RBP4.23□□□□□ -1.73
VPS4B-205ENST00000591383 A0A096LNJ9 63 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 LINC01546A6NGU7 62 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 C1orf196B1AJZ1 125 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.22□□□□□ -1.73
VPS4B-205ENST00000591383 NDUFA6P56556 154 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 HERV-K104P63124 156 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 HIGD2BQ4VC39 106 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 LINC00173Q6ZV60 143 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 Q8N814 137 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 KRTAP9-2Q9BYQ4 174 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 VCX2Q9H322 139 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 PYGO1Q9Y3Y4 419 aa4.22□□□□□ -1.73
VPS4B-205ENST00000591383 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.74
VPS4B-205ENST00000591383 A0A1B0GVY2 172 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 LRCOL1A6NCL2 159 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 LINC01549A6NIU2 74 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 IGIPA6NJ69 53 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 C16orf90A8MZG2 172 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 H0Y8G0 127 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 COX7A2LO14548 114 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BKO60814 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BJP06899 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BOP23527 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BBP33778 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BDP58876 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BCP62807 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST2H2BEQ16778 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 C14orf177Q52M58 125 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.21□□□□□ -1.74
VPS4B-205ENST00000591383 KRTAP26-1Q6PEX3 210 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 ERASQ7Z444 233 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 FAM19A2Q8N3H0 131 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BHQ93079 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BNQ99877 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 HIST1H2BMQ99879 126 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 DNAH5Q8TE73 4624 aa4.21□□□□□ -1.74
VPS4B-205ENST00000591383 DYNC1H1Q14204 4646 aaKnown RBP4.2□□□□□ -1.74
VPS4B-205ENST00000591383 ATP5LO75964 103 aa4.2□□□□□ -1.74
VPS4B-205ENST00000591383 UBE2D1P51668 147 aa4.2□□□□□ -1.74
VPS4B-205ENST00000591383 PDZD11Q5EBL8 140 aa4.2□□□□□ -1.74
VPS4B-205ENST00000591383 C5orf38Q86SI9 138 aa4.2□□□□□ -1.74
VPS4B-205ENST00000591383 LINC00469Q8N7U9 141 aa4.2□□□□□ -1.74
VPS4B-205ENST00000591383 C15orf56Q8N910 161 aa4.2□□□□□ -1.74
VPS4B-205ENST00000591383 FAM104AQ969W3 186 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms