RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 SMIM20Q8N5G0 67 aa10.5□□□□□ -0.73
LRP3-203ENST00000590278 RNF152Q8N8N0 203 aa10.5□□□□□ -0.73
LRP3-203ENST00000590278 C4orf3Q8WVX3 66 aa10.5□□□□□ -0.73
LRP3-203ENST00000590278 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
LRP3-203ENST00000590278 CRPP02741 224 aa10.49□□□□□ -0.73
LRP3-203ENST00000590278 MIR7-3HGQ8N6C7 128 aa10.49□□□□□ -0.73
LRP3-203ENST00000590278 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
LRP3-203ENST00000590278 OR13C6PQ8NH95 151 aa10.49□□□□□ -0.73
LRP3-203ENST00000590278 FAM218AQ96MZ4 157 aa10.49□□□□□ -0.73
LRP3-203ENST00000590278 COPS9Q8WXC6 57 aa10.48□□□□□ -0.73
LRP3-203ENST00000590278 Q96MF0 132 aa10.48□□□□□ -0.73
LRP3-203ENST00000590278 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
LRP3-203ENST00000590278 CDC42SE2Q9NRR3 84 aa10.48□□□□□ -0.73
LRP3-203ENST00000590278 TRGV4A0A0C4DH28 118 aa10.48□□□□□ -0.73
LRP3-203ENST00000590278 Q6Q795 121 aa10.48□□□□□ -0.73
LRP3-203ENST00000590278 SETXQ7Z333 2677 aaKnown RBP10.47□□□□□ -0.73
LRP3-203ENST00000590278 DNAL4O96015 105 aa10.47□□□□□ -0.73
LRP3-203ENST00000590278 C5orf38Q86SI9 138 aa10.47□□□□□ -0.73
LRP3-203ENST00000590278 NBEAL2Q6ZNJ1 2754 aa10.47□□□□□ -0.73
LRP3-203ENST00000590278 FLNAP21333 2647 aaKnown RBP10.47□□□□□ -0.73
LRP3-203ENST00000590278 SND1-IT1Q9HBX3 110 aa10.46□□□□□ -0.73
LRP3-203ENST00000590278 A0A096LNT2 108 aa10.46□□□□□ -0.73
LRP3-203ENST00000590278 ATP5G1P05496 136 aa10.46□□□□□ -0.74
LRP3-203ENST00000590278 A8MTW9 85 aa10.45□□□□□ -0.74
LRP3-203ENST00000590278 FAM240AA0A1B0GVK7 77 aa10.45□□□□□ -0.74
LRP3-203ENST00000590278 SMCR5Q8TEV8 140 aa10.45□□□□□ -0.74
LRP3-203ENST00000590278 PAX4O43316 350 aa10.44□□□□□ -0.74
LRP3-203ENST00000590278 ITPR3Q14573 2671 aa10.44□□□□□ -0.74
LRP3-203ENST00000590278 GCN1Q92616 2671 aaKnown RBP10.44□□□□□ -0.74
LRP3-203ENST00000590278 CCL24O00175 119 aa10.44□□□□□ -0.74
LRP3-203ENST00000590278 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
LRP3-203ENST00000590278 CLPSL2Q6UWE3 100 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 TRBV10-1A0A0K0K1A3 114 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 F5H768 121 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 HERV-K104P63124 156 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 HIST2H2BCQ6DN03 193 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 DEFB130AP0DP74 79 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 LINC00337Q8N6G1 96 aa10.43□□□□□ -0.74
LRP3-203ENST00000590278 HIVEP2P31629 2446 aa10.42□□□□□ -0.74
LRP3-203ENST00000590278 LINC01600Q96MT4 127 aa10.42□□□□□ -0.74
LRP3-203ENST00000590278 AKAP9Q99996 3911 aa10.42□□□□□ -0.74
LRP3-203ENST00000590278 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
LRP3-203ENST00000590278 MRPL23Q16540 153 aaKnown RBP10.41□□□□□ -0.74
LRP3-203ENST00000590278 A0A096LPF7 62 aa10.41□□□□□ -0.74
LRP3-203ENST00000590278 TRAV13-2A0A0B4J235 113 aa10.41□□□□□ -0.74
LRP3-203ENST00000590278 C14orf132Q9NPU4 83 aa10.41□□□□□ -0.74
LRP3-203ENST00000590278 TRACP01848 142 aa10.41□□□□□ -0.74
LRP3-203ENST00000590278 A0A087WYN8 130 aa10.4□□□□□ -0.74
LRP3-203ENST00000590278 SLPIP03973 132 aa10.4□□□□□ -0.74
LRP3-203ENST00000590278 MALP21145 153 aa10.4□□□□□ -0.74
LRP3-203ENST00000590278 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.74
LRP3-203ENST00000590278 ZNF469Q96JG9 3925 aaPredicted RBP10.4□□□□□ -0.74
LRP3-203ENST00000590278 ACYP1P07311 99 aa10.4□□□□□ -0.74
LRP3-203ENST00000590278 CR1P17927 2039 aa10.4□□□□□ -0.75
LRP3-203ENST00000590278 FSHBP01225 129 aa10.39□□□□□ -0.75
LRP3-203ENST00000590278 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
LRP3-203ENST00000590278 CSDC2Q9Y534 153 aaKnown RBP10.39□□□□□ -0.75
LRP3-203ENST00000590278 LECT2O14960 151 aa10.39□□□□□ -0.75
LRP3-203ENST00000590278 XCL1P47992 114 aa10.39□□□□□ -0.75
LRP3-203ENST00000590278 C6orf226Q5I0X4 101 aa10.39□□□□□ -0.75
LRP3-203ENST00000590278 C9orf153Q5TBE3 101 aa10.39□□□□□ -0.75
LRP3-203ENST00000590278 LINC00643Q86TS7 51 aa10.39□□□□□ -0.75
LRP3-203ENST00000590278 TRBV7-7A0A0K0K1E9 115 aa10.38□□□□□ -0.75
LRP3-203ENST00000590278 IGKV3D-7A0A0C4DH55 119 aa10.38□□□□□ -0.75
LRP3-203ENST00000590278 RNASE1P07998 156 aaKnown RBP10.38□□□□□ -0.75
LRP3-203ENST00000590278 INAFM2P0DMQ5 153 aa10.38□□□□□ -0.75
LRP3-203ENST00000590278 IGKV2-28A0A075B6P5 120 aa10.37□□□□□ -0.75
LRP3-203ENST00000590278 IGKV2D-28P01615 120 aa10.37□□□□□ -0.75
LRP3-203ENST00000590278 CCL18P55774 89 aa10.37□□□□□ -0.75
LRP3-203ENST00000590278 DEFB113Q30KQ7 82 aa10.37□□□□□ -0.75
LRP3-203ENST00000590278 SDIM1Q6ZPB5 146 aa10.37□□□□□ -0.75
LRP3-203ENST00000590278 NOTCH2Q04721 2471 aa10.37□□□□□ -0.75
LRP3-203ENST00000590278 DNAJC9-AS1A6NH13 148 aa10.37□□□□□ -0.75
LRP3-203ENST00000590278 C9orf129Q5T035 196 aaKnown RBP10.37□□□□□ -0.75
LRP3-203ENST00000590278 USP24Q9UPU5 2620 aa10.35□□□□□ -0.75
LRP3-203ENST00000590278 APCP25054 2843 aa10.35□□□□□ -0.75
LRP3-203ENST00000590278 NCR3O14931 201 aa10.35□□□□□ -0.75
LRP3-203ENST00000590278 C16orf74Q96GX8 76 aa10.35□□□□□ -0.75
LRP3-203ENST00000590278 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
LRP3-203ENST00000590278 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
LRP3-203ENST00000590278 TRBV6-8A0A0A6YYG3 113 aa10.34□□□□□ -0.75
LRP3-203ENST00000590278 SVIPQ8NHG7 77 aa10.34□□□□□ -0.75
LRP3-203ENST00000590278 TRAV25A0A0B4J276 109 aa10.33□□□□□ -0.76
LRP3-203ENST00000590278 WFDC11Q8NEX6 87 aa10.33□□□□□ -0.76
LRP3-203ENST00000590278 C22orf24Q9Y442 160 aa10.33□□□□□ -0.76
LRP3-203ENST00000590278 GIG44P09565 113 aaPredicted RBP10.32□□□□□ -0.76
LRP3-203ENST00000590278 PRR3P79522 188 aaKnown RBP10.32□□□□□ -0.76
LRP3-203ENST00000590278 PF4P02776 101 aa10.32□□□□□ -0.76
LRP3-203ENST00000590278 ESM1Q9NQ30 184 aa10.32□□□□□ -0.76
LRP3-203ENST00000590278 KLK5Q9Y337 293 aaPredicted RBP10.32□□□□□ -0.76
LRP3-203ENST00000590278 TRBV6-4A0A1B0GX49 114 aa10.31□□□□□ -0.76
LRP3-203ENST00000590278 FAM19A3Q7Z5A8 133 aa10.31□□□□□ -0.76
LRP3-203ENST00000590278 NBPF19A0A087WUL8 3843 aa10.31□□□□□ -0.76
LRP3-203ENST00000590278 IGLV10-54A0A075B6I4 117 aa10.31□□□□□ -0.76
LRP3-203ENST00000590278 IGHV3OR16-9A0A0B4J2B5 98 aa10.31□□□□□ -0.76
LRP3-203ENST00000590278 PLAC8L1A1L4L8 177 aa10.3□□□□□ -0.76
LRP3-203ENST00000590278 IMUPQ9GZP8 106 aa10.3□□□□□ -0.76
LRP3-203ENST00000590278 A0A087WVE0 104 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms