RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 NUPR2A6NF83 97 aa7.18□□□□□ -1.26
CHMP1B-202ENST00000588284 SIVA1O15304 175 aa7.18□□□□□ -1.26
CHMP1B-202ENST00000588284 BOD1L2Q8IYS8 172 aa7.18□□□□□ -1.26
CHMP1B-202ENST00000588284 LINC00269Q8N2A0 174 aa7.18□□□□□ -1.26
CHMP1B-202ENST00000588284 Q8N3U1 123 aa7.18□□□□□ -1.26
CHMP1B-202ENST00000588284 MRPS16Q9Y3D3 137 aaKnown RBP7.18□□□□□ -1.26
CHMP1B-202ENST00000588284 TRAV8-4A0A0B4J246 113 aa7.17□□□□□ -1.26
CHMP1B-202ENST00000588284 IGHV1-58A0A0C4DH39 117 aa7.17□□□□□ -1.26
CHMP1B-202ENST00000588284 IGKV3OR2-268A0A0C4DH90 116 aa7.17□□□□□ -1.26
CHMP1B-202ENST00000588284 HNRNPA3P51991 378 aaKnown RBP7.17□□□□□ -1.26
CHMP1B-202ENST00000588284 COX6A2Q02221 97 aa7.17□□□□□ -1.26
CHMP1B-202ENST00000588284 REG3AQ06141 175 aa7.17□□□□□ -1.26
CHMP1B-202ENST00000588284 CDKN2A-AS1Q9UH64 79 aa7.17□□□□□ -1.26
CHMP1B-202ENST00000588284 IGKV2D-26A0A0A0MRZ7 120 aa7.16□□□□□ -1.26
CHMP1B-202ENST00000588284 J3QQQ9 107 aa7.16□□□□□ -1.26
CHMP1B-202ENST00000588284 LGALS3P17931 250 aaKnown RBP7.16□□□□□ -1.26
CHMP1B-202ENST00000588284 LINC01556Q5JQF7 62 aa7.16□□□□□ -1.26
CHMP1B-202ENST00000588284 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
CHMP1B-202ENST00000588284 PRR34Q9NV39 138 aa7.16□□□□□ -1.26
CHMP1B-202ENST00000588284 KLK12Q9UKR0 248 aa7.16□□□□□ -1.26
CHMP1B-202ENST00000588284 IGHV3OR16-9A0A0B4J2B5 98 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 MYMXA0A1B0GTQ4 84 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 IGHV3-33P01772 117 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 CRPP02741 224 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 DNAH10OSP0CZ25 163 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 IGHV3-30-5P0DP03 117 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 WFDC10BQ8IUB3 73 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 PCP2Q8IVA1 136 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 APLNQ9ULZ1 77 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 LINC00588Q9Y4M8 146 aa7.15□□□□□ -1.26
CHMP1B-202ENST00000588284 A0A087WZ39 114 aa7.14□□□□□ -1.27
CHMP1B-202ENST00000588284 K7EP13 123 aa7.14□□□□□ -1.27
CHMP1B-202ENST00000588284 MIAQ16674 131 aa7.14□□□□□ -1.27
CHMP1B-202ENST00000588284 UPK3BQ9BT76 320 aa7.14□□□□□ -1.27
CHMP1B-202ENST00000588284 HIGD1BQ9P298 99 aa7.14□□□□□ -1.27
CHMP1B-202ENST00000588284 ZNF815PA8K554 130 aa7.13□□□□□ -1.27
CHMP1B-202ENST00000588284 SPINK8P0C7L1 97 aa7.13□□□□□ -1.27
CHMP1B-202ENST00000588284 MAPKAPK5-AS1Q8N8E1 139 aa7.13□□□□□ -1.27
CHMP1B-202ENST00000588284 CHCHD10Q8WYQ3 142 aaPredicted RBP7.13□□□□□ -1.27
CHMP1B-202ENST00000588284 UBE2WQ96B02 151 aa7.13□□□□□ -1.27
CHMP1B-202ENST00000588284 TENM3Q9P273 2699 aa7.13□□□□□ -1.27
CHMP1B-202ENST00000588284 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 IGLV5-39A0A0G2JS06 123 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 SMIM1B2RUZ4 78 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 H3BS24 57 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 COX7A2LO14548 114 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 XCL1P47992 114 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 CTAG1AP78358 180 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 CLPSL2Q6UWE3 100 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 ENHOQ6UWT2 76 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 C10orf126Q8N4M7 172 aa7.12□□□□□ -1.27
CHMP1B-202ENST00000588284 IGHV3-64A0A075B6Q5 118 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 TRAV8-3A0A0A6YYJ7 113 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 LINC00587B1AMM8 73 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 APOMO95445 188 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 SCGB1D4Q6XE38 83 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 UBE2DNLQ8IWF7 75 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 TTTY13Q9BZ97 58 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 Q9H8V8 135 aa7.11□□□□□ -1.27
CHMP1B-202ENST00000588284 KMT2CQ8NEZ4 4911 aaKnown RBP7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 GAGE12HA6NDE8 117 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 IBA57-AS1B1ANH7 110 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 M0R143 59 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 MALP21145 153 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 TAL2Q16559 108 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 ZFAND6Q6FIF0 208 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 SFTA2Q6UW10 78 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 C2orf91Q6ZV80 131 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 RMI2Q96E14 147 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 NDUFA12Q9UI09 145 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 DNAH9Q9NYC9 4486 aa7.1□□□□□ -1.27
CHMP1B-202ENST00000588284 IGLV10-54A0A075B6I4 117 aa7.09□□□□□ -1.27
CHMP1B-202ENST00000588284 HERV-K104P63124 156 aa7.09□□□□□ -1.27
CHMP1B-202ENST00000588284 COX7B2Q8TF08 81 aa7.09□□□□□ -1.27
CHMP1B-202ENST00000588284 C1orf43Q9BWL3 253 aa7.09□□□□□ -1.27
CHMP1B-202ENST00000588284 NDUFA1O15239 70 aa7.08□□□□□ -1.28
CHMP1B-202ENST00000588284 PRSS2P07478 247 aa7.08□□□□□ -1.28
CHMP1B-202ENST00000588284 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
CHMP1B-202ENST00000588284 HSD52Q0P140 79 aa7.08□□□□□ -1.28
CHMP1B-202ENST00000588284 FOXI1Q12951 378 aa7.08□□□□□ -1.28
CHMP1B-202ENST00000588284 CIRBPQ14011 172 aaKnown RBP7.08□□□□□ -1.28
CHMP1B-202ENST00000588284 C6orf226Q5I0X4 101 aa7.08□□□□□ -1.28
CHMP1B-202ENST00000588284 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
CHMP1B-202ENST00000588284 Q8IZM0 81 aa7.07□□□□□ -1.28
CHMP1B-202ENST00000588284 MUC7Q8TAX7 377 aa7.07□□□□□ -1.28
CHMP1B-202ENST00000588284 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
CHMP1B-202ENST00000588284 TOMM7Q9P0U1 55 aa7.07□□□□□ -1.28
CHMP1B-202ENST00000588284 COX11Q9Y6N1 276 aa7.07□□□□□ -1.28
CHMP1B-202ENST00000588284 A0A0J9YXY3 114 aa7.06□□□□□ -1.28
CHMP1B-202ENST00000588284 TMEM238C9JI98 176 aa7.06□□□□□ -1.28
CHMP1B-202ENST00000588284 TIMM17BO60830 172 aa7.06□□□□□ -1.28
CHMP1B-202ENST00000588284 LBHQ53QV2 105 aaPredicted RBP7.06□□□□□ -1.28
CHMP1B-202ENST00000588284 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
CHMP1B-202ENST00000588284 Q6ZVH6 145 aa7.06□□□□□ -1.28
CHMP1B-202ENST00000588284 HIST1H4GQ99525 98 aa7.06□□□□□ -1.28
CHMP1B-202ENST00000588284 SPANXB1Q9NS25 103 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms