RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 B9D2Q9BPU9 175 aa13.62□□□□□ -0.23
TRIM47-204ENST00000587339 Q8N3U1 123 aa13.62□□□□□ -0.23
TRIM47-204ENST00000587339 ANGP03950 147 aaKnown RBP13.61□□□□□ -0.23
TRIM47-204ENST00000587339 CLPSL2Q6UWE3 100 aa13.61□□□□□ -0.23
TRIM47-204ENST00000587339 LINC00269Q8N2A0 174 aa13.61□□□□□ -0.23
TRIM47-204ENST00000587339 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
TRIM47-204ENST00000587339 HUWE1Q7Z6Z7 4374 aaKnown RBP13.6□□□□□ -0.23
TRIM47-204ENST00000587339 SS18Q15532 418 aa13.6□□□□□ -0.23
TRIM47-204ENST00000587339 ORAOV1Q8WV07 137 aa13.6□□□□□ -0.23
TRIM47-204ENST00000587339 HIST1H4GQ99525 98 aa13.6□□□□□ -0.23
TRIM47-204ENST00000587339 CBY1Q9Y3M2 126 aa13.6□□□□□ -0.23
TRIM47-204ENST00000587339 IGLV5-39A0A0G2JS06 123 aa13.59□□□□□ -0.23
TRIM47-204ENST00000587339 GCSHP23434 173 aa13.59□□□□□ -0.23
TRIM47-204ENST00000587339 TAL2Q16559 108 aa13.59□□□□□ -0.23
TRIM47-204ENST00000587339 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.23
TRIM47-204ENST00000587339 IGHV3OR16-9A0A0B4J2B5 98 aa13.58□□□□□ -0.24
TRIM47-204ENST00000587339 ZFAND6Q6FIF0 208 aa13.58□□□□□ -0.24
TRIM47-204ENST00000587339 CCL25O15444 150 aa13.57□□□□□ -0.24
TRIM47-204ENST00000587339 REG3AQ06141 175 aa13.57□□□□□ -0.24
TRIM47-204ENST00000587339 CEND1Q8N111 149 aa13.57□□□□□ -0.24
TRIM47-204ENST00000587339 ESRGQ1W209 222 aa13.56□□□□□ -0.24
TRIM47-204ENST00000587339 C10orf126Q8N4M7 172 aa13.56□□□□□ -0.24
TRIM47-204ENST00000587339 XCL1P47992 114 aa13.56□□□□□ -0.24
TRIM47-204ENST00000587339 SRSF9Q13242 221 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRIM47-204ENST00000587339 TM2D2Q9BX73 214 aa13.56□□□□□ -0.24
TRIM47-204ENST00000587339 C15orf53Q8NAA6 179 aa13.55□□□□□ -0.24
TRIM47-204ENST00000587339 WFDC10BQ8IUB3 73 aa13.54□□□□□ -0.24
TRIM47-204ENST00000587339 A0A087WZ39 114 aa13.54□□□□□ -0.24
TRIM47-204ENST00000587339 A0A0J9YXY3 114 aa13.54□□□□□ -0.24
TRIM47-204ENST00000587339 PTTG1IPP53801 180 aa13.54□□□□□ -0.24
TRIM47-204ENST00000587339 FXYD2P54710 66 aa13.54□□□□□ -0.24
TRIM47-204ENST00000587339 KRTAP21-3Q3LHN1 58 aa13.54□□□□□ -0.24
TRIM47-204ENST00000587339 A6NDN8 102 aa13.53□□□□□ -0.24
TRIM47-204ENST00000587339 C5orf38Q86SI9 138 aa13.53□□□□□ -0.24
TRIM47-204ENST00000587339 KLK12Q9UKR0 248 aa13.53□□□□□ -0.24
TRIM47-204ENST00000587339 DNHD1Q96M86 4753 aa13.53□□□□□ -0.24
TRIM47-204ENST00000587339 SPANXB1Q9NS25 103 aaPredicted RBP13.52□□□□□ -0.24
TRIM47-204ENST00000587339 K7EP13 123 aa13.52□□□□□ -0.25
TRIM47-204ENST00000587339 NDUFA1O15239 70 aa13.52□□□□□ -0.25
TRIM47-204ENST00000587339 IGHV3-30P01768 117 aa13.52□□□□□ -0.25
TRIM47-204ENST00000587339 IGHV3-33P01772 117 aa13.52□□□□□ -0.25
TRIM47-204ENST00000587339 IGHV3-30-5P0DP03 117 aa13.52□□□□□ -0.25
TRIM47-204ENST00000587339 COL7A1Q02388 2944 aa13.52□□□□□ -0.25
TRIM47-204ENST00000587339 IGLV10-54A0A075B6I4 117 aa13.51□□□□□ -0.25
TRIM47-204ENST00000587339 PRR34Q9NV39 138 aa13.51□□□□□ -0.25
TRIM47-204ENST00000587339 CHCHD10Q8WYQ3 142 aaPredicted RBP13.51□□□□□ -0.25
TRIM47-204ENST00000587339 Q9H8V8 135 aa13.51□□□□□ -0.25
TRIM47-204ENST00000587339 TMEM238C9JI98 176 aa13.5□□□□□ -0.25
TRIM47-204ENST00000587339 CD164L2Q6UWJ8 174 aa13.5□□□□□ -0.25
TRIM47-204ENST00000587339 IGLL5B9A064 214 aa13.49□□□□□ -0.25
TRIM47-204ENST00000587339 NHLRC4P0CG21 123 aaPredicted RBP13.49□□□□□ -0.25
TRIM47-204ENST00000587339 TOMM7Q9P0U1 55 aa13.49□□□□□ -0.25
TRIM47-204ENST00000587339 COX7B2Q8TF08 81 aa13.48□□□□□ -0.25
TRIM47-204ENST00000587339 DNAH9Q9NYC9 4486 aa13.48□□□□□ -0.25
TRIM47-204ENST00000587339 CRPP02741 224 aa13.47□□□□□ -0.25
TRIM47-204ENST00000587339 TAX1BP3O14907 124 aa13.47□□□□□ -0.25
TRIM47-204ENST00000587339 ENHOQ6UWT2 76 aa13.47□□□□□ -0.25
TRIM47-204ENST00000587339 Q6ZVH6 145 aa13.47□□□□□ -0.25
TRIM47-204ENST00000587339 ZNF625Q96I27 306 aaPredicted RBP13.47□□□□□ -0.25
TRIM47-204ENST00000587339 NHP2Q9NX24 153 aaKnown RBP13.47□□□□□ -0.25
TRIM47-204ENST00000587339 STAB2Q8WWQ8 2551 aa13.46□□□□□ -0.25
TRIM47-204ENST00000587339 COX7A2LO14548 114 aa13.46□□□□□ -0.25
TRIM47-204ENST00000587339 UBE2WQ96B02 151 aa13.46□□□□□ -0.25
TRIM47-204ENST00000587339 LITAFQ99732 161 aa13.46□□□□□ -0.25
TRIM47-204ENST00000587339 LINC01561Q8N1V8 128 aa13.45□□□□□ -0.26
TRIM47-204ENST00000587339 TMEM238LA0A1B0GVL6 79 aa13.45□□□□□ -0.26
TRIM47-204ENST00000587339 A6NJY4 79 aa13.45□□□□□ -0.26
TRIM47-204ENST00000587339 SMIM13P0DJ93 91 aa13.45□□□□□ -0.26
TRIM47-204ENST00000587339 HERV-K104P63124 156 aa13.45□□□□□ -0.26
TRIM47-204ENST00000587339 LINC01556Q5JQF7 62 aa13.44□□□□□ -0.26
TRIM47-204ENST00000587339 COX11Q9Y6N1 276 aa13.44□□□□□ -0.26
TRIM47-204ENST00000587339 TIMM17BO60830 172 aa13.43□□□□□ -0.26
TRIM47-204ENST00000587339 CCL18P55774 89 aa13.43□□□□□ -0.26
TRIM47-204ENST00000587339 CIRBPQ14011 172 aaKnown RBP13.43□□□□□ -0.26
TRIM47-204ENST00000587339 ADAMTSL4-AS1Q5T5F5 129 aa13.43□□□□□ -0.26
TRIM47-204ENST00000587339 TRAV8-4A0A0B4J246 113 aa13.43□□□□□ -0.26
TRIM47-204ENST00000587339 MALP21145 153 aa13.43□□□□□ -0.26
TRIM47-204ENST00000587339 FOXI1Q12951 378 aa13.43□□□□□ -0.26
TRIM47-204ENST00000587339 LINC00588Q9Y4M8 146 aa13.43□□□□□ -0.26
TRIM47-204ENST00000587339 K7ERJ3 54 aa13.42□□□□□ -0.26
TRIM47-204ENST00000587339 RAB37Q96AX2 223 aa13.42□□□□□ -0.26
TRIM47-204ENST00000587339 GAGE12HA6NDE8 117 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 PRSS2P07478 247 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 MIAQ16674 131 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 C6orf226Q5I0X4 101 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 SPANXDQ9BXN6 97 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 SPANXCQ9NY87 97 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 PCP4P48539 62 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 MEIG1Q5JSS6 88 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 MUSTN1Q8IVN3 82 aa13.41□□□□□ -0.26
TRIM47-204ENST00000587339 DNAH10OSP0CZ25 163 aa13.4□□□□□ -0.26
TRIM47-204ENST00000587339 Q8IZM0 81 aa13.4□□□□□ -0.26
TRIM47-204ENST00000587339 MEGF8Q7Z7M0 2845 aa13.4□□□□□ -0.27
TRIM47-204ENST00000587339 A0A1B0GWB2 263 aa13.39□□□□□ -0.27
TRIM47-204ENST00000587339 RPL24P83731 157 aaKnown RBP13.39□□□□□ -0.27
TRIM47-204ENST00000587339 SFTA2Q6UW10 78 aa13.39□□□□□ -0.27
TRIM47-204ENST00000587339 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
TRIM47-204ENST00000587339 DAND5Q8N907 189 aa13.37□□□□□ -0.27
TRIM47-204ENST00000587339 C21orf62-AS1Q17RA5 79 aa13.37□□□□□ -0.27
TRIM47-204ENST00000587339 A4D1N5 150 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms