RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 LOC107984640A0A0U1RRK4 108 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 LINC01549A6NIU2 74 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 F8WDY8 70 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 MT-ND6P03923 174 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 NPSP0C0P6 89 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 SEC11AP67812 179 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 COX6A2Q02221 97 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 CIRBPQ14011 172 aaKnown RBP3.28□□□□□ -1.88
LINC01140-208ENST00000587165 RHEBQ15382 184 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 C5orf38Q86SI9 138 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 SPACA4Q8TDM5 124 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 ORAOV1Q8WV07 137 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 C2orf48Q96LS8 159 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 VCX2Q9H322 139 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 PYGO1Q9Y3Y4 419 aa3.28□□□□□ -1.88
LINC01140-208ENST00000587165 SRRM2Q9UQ35 2752 aaKnown RBP3.28□□□□□ -1.89
LINC01140-208ENST00000587165 PCLOQ9Y6V0 5065 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 PRSS47A8MTI9 375 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 NDUFA1O15239 70 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 PRSS2P07478 247 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 CHTF8P0CG12 524 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 ADCYAP1P18509 176 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 IFITM2Q01629 132 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 RPL18AQ02543 176 aaKnown RBP3.27□□□□□ -1.89
LINC01140-208ENST00000587165 FA2HQ7L5A8 372 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 STPG4Q8N801 248 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 PRSS3P2Q8NHM4 247 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 GNB1LQ9BYB4 327 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 RPS10P5Q9NQ39 176 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 SMCO4Q9NRQ5 59 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 PLAC8Q9NZF1 115 aa3.27□□□□□ -1.89
LINC01140-208ENST00000587165 APOBP04114 4563 aaKnown RBP3.27□□□□□ -1.89
LINC01140-208ENST00000587165 IGLV4-3A0A075B6K6 122 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 A0A096LNI7 61 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 SNAPINO95295 136 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 SLPIP03973 132 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 PTTG1IPP53801 180 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 FABP9Q0Z7S8 132 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 GAGE2BQ13066 116 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 KIAA1644Q3SXP7 199 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 SVBPQ8N300 66 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 LINC00526Q96FQ7 95 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 PACRGQ96M98 296 aaPredicted RBP3.26□□□□□ -1.89
LINC01140-208ENST00000587165 TIMM17AQ99595 171 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 OPRPNQ99935 248 aaPredicted RBP3.26□□□□□ -1.89
LINC01140-208ENST00000587165 GEMIN7Q9H840 131 aaKnown RBP3.26□□□□□ -1.89
LINC01140-208ENST00000587165 CARHSP1Q9Y2V2 147 aaKnown RBP3.26□□□□□ -1.89
LINC01140-208ENST00000587165 ABCA13Q86UQ4 5058 aa3.26□□□□□ -1.89
LINC01140-208ENST00000587165 A0A087WZ39 114 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 IGHV3OR16-9A0A0B4J2B5 98 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 PANO1I0J062 215 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 OXTP01178 125 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 APOC3P02656 99 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 CKS1BP61024 79 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 HERVK_113P63121 156 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 RNF151Q2KHN1 245 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 Q6ZRU5 148 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 SCGB3A1Q96QR1 104 aa3.25□□□□□ -1.89
LINC01140-208ENST00000587165 MRPL18Q9H0U6 180 aaKnown RBP3.25□□□□□ -1.89
LINC01140-208ENST00000587165 MRPL35Q9NZE8 188 aaKnown RBP3.25□□□□□ -1.89
LINC01140-208ENST00000587165 TRBV30A0A0K0K1B3 111 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 KRTAP29-1A8MX34 341 aaPredicted RBP3.24□□□□□ -1.89
LINC01140-208ENST00000587165 SMCPP49901 116 aaPredicted RBP3.24□□□□□ -1.89
LINC01140-208ENST00000587165 UBE2D1P51668 147 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 RAB5BP61020 215 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 C10orf91Q5T1B1 145 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 ERASQ7Z444 233 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 LINC00469Q8N7U9 141 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 TOMM6Q96B49 74 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 ALKBH7Q9BT30 221 aaPredicted RBP3.24□□□□□ -1.89
LINC01140-208ENST00000587165 TOMM7Q9P0U1 55 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 TRAPPC1Q9Y5R8 145 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
LINC01140-208ENST00000587165 IGIPA6NJ69 53 aa3.23□□□□□ -1.89
LINC01140-208ENST00000587165 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.23□□□□□ -1.89
LINC01140-208ENST00000587165 H3BRM9 83 aa3.23□□□□□ -1.89
LINC01140-208ENST00000587165 CXCL5P42830 114 aa3.23□□□□□ -1.89
LINC01140-208ENST00000587165 PRR3P79522 188 aaKnown RBP3.23□□□□□ -1.89
LINC01140-208ENST00000587165 C6orf226Q5I0X4 101 aa3.23□□□□□ -1.89
LINC01140-208ENST00000587165 Q6ZRP5 223 aa3.23□□□□□ -1.89
LINC01140-208ENST00000587165 AMELXQ99217 191 aa3.23□□□□□ -1.89
LINC01140-208ENST00000587165 A0A0J9YXV3 536 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 TLX1NBP0CAT3 122 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 NDUFA6P56556 154 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 PMVKQ15126 192 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 GAGE2EQ4V326 116 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 C9orf116Q5BN46 136 aaPredicted RBP3.22□□□□□ -1.89
LINC01140-208ENST00000587165 REG3GQ6UW15 175 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 UNQ6190/PRO20217Q6UXQ8 127 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 LINC00173Q6ZV60 143 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 Q8IZM0 81 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 FAM104AQ969W3 186 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 C6orf48Q9UBA6 75 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 GAGE2DQ9UEU5 116 aa3.22□□□□□ -1.89
LINC01140-208ENST00000587165 TMEM238LA0A1B0GVL6 79 aa3.21□□□□□ -1.9
LINC01140-208ENST00000587165 TINCRA0A1B0GVN0 87 aa3.21□□□□□ -1.9
LINC01140-208ENST00000587165 LINC01546A6NGU7 62 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms