RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ZNF561-AS1K7EIQ3 104 aa8.95□□□□□ -0.98
PRKCSH-202ENST00000585540 S100A1P23297 94 aa8.95□□□□□ -0.98
PRKCSH-202ENST00000585540 RAB5BP61020 215 aa8.95□□□□□ -0.98
PRKCSH-202ENST00000585540 LINC01561Q8N1V8 128 aa8.95□□□□□ -0.98
PRKCSH-202ENST00000585540 OR10D4PQ8NGN7 298 aa8.95□□□□□ -0.98
PRKCSH-202ENST00000585540 TOMM6Q96B49 74 aa8.95□□□□□ -0.98
PRKCSH-202ENST00000585540 A0A096LNJ9 63 aa8.94□□□□□ -0.98
PRKCSH-202ENST00000585540 IGIPA6NJ69 53 aa8.94□□□□□ -0.98
PRKCSH-202ENST00000585540 LINC00614P0C842 121 aa8.94□□□□□ -0.98
PRKCSH-202ENST00000585540 ZC2HC1BQ5TFG8 222 aa8.94□□□□□ -0.98
PRKCSH-202ENST00000585540 AMELXQ99217 191 aa8.94□□□□□ -0.98
PRKCSH-202ENST00000585540 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
PRKCSH-202ENST00000585540 PMCHL1Q16048 86 aa8.93□□□□□ -0.98
PRKCSH-202ENST00000585540 LINC00173Q6ZV60 143 aa8.93□□□□□ -0.98
PRKCSH-202ENST00000585540 ERASQ7Z444 233 aa8.93□□□□□ -0.98
PRKCSH-202ENST00000585540 FAM19A3Q7Z5A8 133 aa8.93□□□□□ -0.98
PRKCSH-202ENST00000585540 C2orf48Q96LS8 159 aa8.93□□□□□ -0.98
PRKCSH-202ENST00000585540 CHAC1Q9BUX1 264 aa8.93□□□□□ -0.98
PRKCSH-202ENST00000585540 VCX2Q9H322 139 aa8.93□□□□□ -0.98
PRKCSH-202ENST00000585540 APOBP04114 4563 aaKnown RBP8.92□□□□□ -0.98
PRKCSH-202ENST00000585540 RYR1P21817 5038 aa8.92□□□□□ -0.98
PRKCSH-202ENST00000585540 HIGD2BQ4VC39 106 aa8.92□□□□□ -0.98
PRKCSH-202ENST00000585540 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
PRKCSH-202ENST00000585540 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
PRKCSH-202ENST00000585540 UBE2D1P51668 147 aa8.91□□□□□ -0.98
PRKCSH-202ENST00000585540 CIRBPQ14011 172 aaKnown RBP8.91□□□□□ -0.98
PRKCSH-202ENST00000585540 SDIM1Q6ZPB5 146 aa8.91□□□□□ -0.98
PRKCSH-202ENST00000585540 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
PRKCSH-202ENST00000585540 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
PRKCSH-202ENST00000585540 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
PRKCSH-202ENST00000585540 HSPG2P98160 4391 aa8.9□□□□□ -0.98
PRKCSH-202ENST00000585540 HBDP02042 147 aa8.9□□□□□ -0.98
PRKCSH-202ENST00000585540 BAGE3Q86Y29 109 aa8.9□□□□□ -0.98
PRKCSH-202ENST00000585540 CARD19Q96LW7 228 aa8.9□□□□□ -0.98
PRKCSH-202ENST00000585540 IGLV4-69A0A075B6H9 119 aa8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 A0A087WZ39 114 aa8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 SLPIP03973 132 aa8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 LINC00310P59036 64 aa8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 HERVK_113P63121 156 aa8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 SYCNQ0VAF6 134 aa8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 LINC00242Q5T6M2 205 aa8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 SCXQ7RTU7 201 aa8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 CHCHD1Q96BP2 118 aaKnown RBP8.89□□□□□ -0.99
PRKCSH-202ENST00000585540 SPAG11BQ08648 103 aa8.88□□□□□ -0.99
PRKCSH-202ENST00000585540 RNF151Q2KHN1 245 aa8.88□□□□□ -0.99
PRKCSH-202ENST00000585540 LINC01620Q4KN68 170 aa8.88□□□□□ -0.99
PRKCSH-202ENST00000585540 C5orf38Q86SI9 138 aa8.88□□□□□ -0.99
PRKCSH-202ENST00000585540 SERF1AO75920 110 aa8.87□□□□□ -0.99
PRKCSH-202ENST00000585540 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
PRKCSH-202ENST00000585540 PDZD11Q5EBL8 140 aa8.87□□□□□ -0.99
PRKCSH-202ENST00000585540 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
PRKCSH-202ENST00000585540 ORAOV1Q8WV07 137 aa8.87□□□□□ -0.99
PRKCSH-202ENST00000585540 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
PRKCSH-202ENST00000585540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HSBP1O75506 76 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 COX6A2Q02221 97 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 Q5VSD8 79 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 GEMIN7Q9H840 131 aaKnown RBP8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 MRPL35Q9NZE8 188 aaKnown RBP8.86□□□□□ -0.99
PRKCSH-202ENST00000585540 DNAH8Q96JB1 4490 aa8.85□□□□□ -0.99
PRKCSH-202ENST00000585540 NDUFA1O15239 70 aa8.85□□□□□ -0.99
PRKCSH-202ENST00000585540 NUPR1O60356 82 aa8.85□□□□□ -0.99
PRKCSH-202ENST00000585540 ATP5LO75964 103 aa8.85□□□□□ -0.99
PRKCSH-202ENST00000585540 PMVKQ15126 192 aa8.85□□□□□ -0.99
PRKCSH-202ENST00000585540 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
PRKCSH-202ENST00000585540 SPACA4Q8TDM5 124 aa8.85□□□□□ -0.99
PRKCSH-202ENST00000585540 LOC107984640A0A0U1RRK4 108 aa8.84□□□□□ -0.99
PRKCSH-202ENST00000585540 TINCRA0A1B0GVN0 87 aa8.84□□□□□ -0.99
PRKCSH-202ENST00000585540 LINC00526Q96FQ7 95 aa8.84□□□□□ -0.99
PRKCSH-202ENST00000585540 LINC00528Q8N1L1 170 aa8.83□□□□□ -1
PRKCSH-202ENST00000585540 PACRGQ96M98 296 aaPredicted RBP8.83□□□□□ -1
PRKCSH-202ENST00000585540 CST9LQ9H4G1 147 aa8.83□□□□□ -1
PRKCSH-202ENST00000585540 IGLV5-45A0A087WSX0 123 aa8.82□□□□□ -1
PRKCSH-202ENST00000585540 A0A0J9YXV3 536 aa8.82□□□□□ -1
PRKCSH-202ENST00000585540 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
PRKCSH-202ENST00000585540 CXCL5P42830 114 aa8.82□□□□□ -1
PRKCSH-202ENST00000585540 Q6ZRU5 148 aa8.82□□□□□ -1
PRKCSH-202ENST00000585540 Q8IZM0 81 aa8.82□□□□□ -1
PRKCSH-202ENST00000585540 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
PRKCSH-202ENST00000585540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.82□□□□□ -1
PRKCSH-202ENST00000585540 SMR3BP02814 79 aaPredicted RBP8.81□□□□□ -1
PRKCSH-202ENST00000585540 PRSS2P07478 247 aa8.81□□□□□ -1
PRKCSH-202ENST00000585540 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
PRKCSH-202ENST00000585540 NDUFA6P56556 154 aa8.81□□□□□ -1
PRKCSH-202ENST00000585540 H3BRM9 83 aa8.8□□□□□ -1
PRKCSH-202ENST00000585540 HAMPP81172 84 aa8.8□□□□□ -1
PRKCSH-202ENST00000585540 KIAA0087Q14695 138 aa8.8□□□□□ -1
PRKCSH-202ENST00000585540 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
PRKCSH-202ENST00000585540 DPH3Q96FX2 82 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms