RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 UQCR10Q9UDW1 63 aa-0.58□□□□□ -2.5
TRAPPC8-212ENST00000584604 HERC1Q15751 4861 aa-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 TCHHQ07283 1943 aa-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 COX6B1P14854 86 aa-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 CDC42SE2Q9NRR3 84 aa-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 COL6A3P12111 3177 aa-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 SMG6Q86US8 1419 aaKnown RBP-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 NSD3Q9BZ95 1437 aa-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 BTAF1O14981 1849 aa-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 CREBBPQ92793 2442 aa-0.59□□□□□ -2.5
TRAPPC8-212ENST00000584604 WDR7Q9Y4E6 1490 aa-0.6□□□□□ -2.5
TRAPPC8-212ENST00000584604 ZFHX3Q15911 3703 aa-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 ARHGEF5Q12774 1597 aa-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 K7EQZ3 153 aa-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 SNAPC5O75971 98 aa-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 TMEM263Q8WUH6 116 aaKnown RBP-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 FAIMQ9NVQ4 179 aa-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 CUL7Q14999 1698 aa-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 PIEZO2Q9H5I5 2752 aa-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 ACANP16112 2415 aa-0.6□□□□□ -2.51
TRAPPC8-212ENST00000584604 NALCNQ8IZF0 1738 aa-0.61□□□□□ -2.51
TRAPPC8-212ENST00000584604 IGLC1P0CG04 106 aa-0.61□□□□□ -2.51
TRAPPC8-212ENST00000584604 DPH3P1Q9H4G8 78 aa-0.61□□□□□ -2.51
TRAPPC8-212ENST00000584604 ARHGEF12Q9NZN5 1544 aa-0.61□□□□□ -2.51
TRAPPC8-212ENST00000584604 TSC2P49815 1807 aa-0.61□□□□□ -2.51
TRAPPC8-212ENST00000584604 NBEAL1Q6ZS30 2694 aa-0.61□□□□□ -2.51
TRAPPC8-212ENST00000584604 SETXQ7Z333 2677 aaKnown RBP-0.61□□□□□ -2.51
TRAPPC8-212ENST00000584604 NF1P21359 2839 aa-0.62□□□□□ -2.51
TRAPPC8-212ENST00000584604 SPRR1BP22528 89 aa-0.62□□□□□ -2.51
TRAPPC8-212ENST00000584604 DEFB123Q8N688 67 aa-0.62□□□□□ -2.51
TRAPPC8-212ENST00000584604 SPRR4Q96PI1 79 aa-0.62□□□□□ -2.51
TRAPPC8-212ENST00000584604 KDM5AP29375 1690 aaKnown RBP-0.62□□□□□ -2.51
TRAPPC8-212ENST00000584604 EFCAB10A6NFE3 127 aa-0.63□□□□□ -2.51
TRAPPC8-212ENST00000584604 FAM24AA6NFZ4 105 aa-0.63□□□□□ -2.51
TRAPPC8-212ENST00000584604 ATP5EP56381 51 aaPredicted RBP-0.63□□□□□ -2.51
TRAPPC8-212ENST00000584604 GNG11P61952 73 aa-0.63□□□□□ -2.51
TRAPPC8-212ENST00000584604 ARL2-SNX15V9GYD0 113 aa-0.63□□□□□ -2.51
TRAPPC8-212ENST00000584604 POLA1P09884 1462 aaPredicted RBP-0.63□□□□□ -2.51
TRAPPC8-212ENST00000584604 MYOM2P54296 1465 aa-0.63□□□□□ -2.51
TRAPPC8-212ENST00000584604 MAP1AP78559 2803 aaPredicted RBP-0.63□□□□□ -2.51
TRAPPC8-212ENST00000584604 LRP1BQ9NZR2 4599 aa-0.64□□□□□ -2.51
TRAPPC8-212ENST00000584604 STAB2Q8WWQ8 2551 aa-0.64□□□□□ -2.51
TRAPPC8-212ENST00000584604 KMT2CQ8NEZ4 4911 aaKnown RBP-0.64□□□□□ -2.51
TRAPPC8-212ENST00000584604 A0A1B0GV90 55 aa-0.64□□□□□ -2.51
TRAPPC8-212ENST00000584604 DLEU1O43261 78 aa-0.64□□□□□ -2.51
TRAPPC8-212ENST00000584604 WHAMMP3Q1A5X7 153 aa-0.64□□□□□ -2.51
TRAPPC8-212ENST00000584604 C10orf113Q5VZT2 155 aa-0.64□□□□□ -2.51
TRAPPC8-212ENST00000584604 FAM223AQ8IWN6 122 aa-0.64□□□□□ -2.51
TRAPPC8-212ENST00000584604 WNK1Q9H4A3 2382 aa-0.65□□□□□ -2.51
TRAPPC8-212ENST00000584604 FAM167A-AS1Q96KT0 104 aa-0.65□□□□□ -2.51
TRAPPC8-212ENST00000584604 SPTA1P02549 2419 aa-0.66□□□□□ -2.51
TRAPPC8-212ENST00000584604 UBA52P62987 128 aaKnown RBP-0.66□□□□□ -2.52
TRAPPC8-212ENST00000584604 KRTAP19-8Q3LI54 63 aa-0.66□□□□□ -2.52
TRAPPC8-212ENST00000584604 IER3IP1Q9Y5U9 82 aa-0.66□□□□□ -2.52
TRAPPC8-212ENST00000584604 HMGXB3Q12766 1538 aa-0.66□□□□□ -2.52
TRAPPC8-212ENST00000584604 GAPVD1Q14C86 1478 aa-0.67□□□□□ -2.52
TRAPPC8-212ENST00000584604 FAT1Q14517 4588 aa-0.67□□□□□ -2.52
TRAPPC8-212ENST00000584604 SCAPERQ9BY12 1400 aa-0.67□□□□□ -2.52
TRAPPC8-212ENST00000584604 FLNBO75369 2602 aaKnown RBP-0.68□□□□□ -2.52
TRAPPC8-212ENST00000584604 TULP4Q9NRJ4 1543 aa-0.68□□□□□ -2.52
TRAPPC8-212ENST00000584604 TET3O43151 1660 aa-0.68□□□□□ -2.52
TRAPPC8-212ENST00000584604 MANBALQ9NQG1 85 aa-0.68□□□□□ -2.52
TRAPPC8-212ENST00000584604 EHBP1L1Q8N3D4 1523 aa-0.69□□□□□ -2.52
TRAPPC8-212ENST00000584604 TRBV7-4A0A0J9YYF1 115 aa-0.69□□□□□ -2.52
TRAPPC8-212ENST00000584604 F6UZH7 168 aa-0.69□□□□□ -2.52
TRAPPC8-212ENST00000584604 GNG4P50150 75 aa-0.69□□□□□ -2.52
TRAPPC8-212ENST00000584604 Q0VG73 95 aa-0.69□□□□□ -2.52
TRAPPC8-212ENST00000584604 SVBPQ8N300 66 aa-0.69□□□□□ -2.52
TRAPPC8-212ENST00000584604 MAGI1Q96QZ7 1491 aaPredicted RBP-0.69□□□□□ -2.52
TRAPPC8-212ENST00000584604 KRTAP20-2Q3LI61 65 aa-0.7□□□□□ -2.52
TRAPPC8-212ENST00000584604 ATRQ13535 2644 aa-0.7□□□□□ -2.52
TRAPPC8-212ENST00000584604 HERC2O95714 4834 aa-0.71□□□□□ -2.52
TRAPPC8-212ENST00000584604 PPP3R1P63098 170 aa-0.71□□□□□ -2.52
TRAPPC8-212ENST00000584604 FDCSPQ8NFU4 85 aa-0.71□□□□□ -2.52
TRAPPC8-212ENST00000584604 LAMA5O15230 3695 aa-0.71□□□□□ -2.52
TRAPPC8-212ENST00000584604 CNOT1A5YKK6 2376 aaKnown RBP-0.72□□□□□ -2.52
TRAPPC8-212ENST00000584604 LINC00959A0A1B0GUT2 108 aa-0.72□□□□□ -2.52
TRAPPC8-212ENST00000584604 CORTO00230 105 aa-0.72□□□□□ -2.52
TRAPPC8-212ENST00000584604 SPRR2BP35325 72 aa-0.72□□□□□ -2.52
TRAPPC8-212ENST00000584604 UBE2D3P61077 147 aa-0.72□□□□□ -2.52
TRAPPC8-212ENST00000584604 UBE2D2P62837 147 aa-0.72□□□□□ -2.52
TRAPPC8-212ENST00000584604 EP300Q09472 2414 aaPredicted RBP-0.72□□□□□ -2.52
TRAPPC8-212ENST00000584604 PCLOQ9Y6V0 5065 aa-0.72□□□□□ -2.53
TRAPPC8-212ENST00000584604 PRKDCP78527 4128 aaKnown RBP-0.73□□□□□ -2.53
TRAPPC8-212ENST00000584604 COX6CP09669 75 aa-0.73□□□□□ -2.53
TRAPPC8-212ENST00000584604 SFTA2Q6UW10 78 aa-0.73□□□□□ -2.53
TRAPPC8-212ENST00000584604 LINC01600Q96MT4 127 aa-0.73□□□□□ -2.53
TRAPPC8-212ENST00000584604 TGP01266 2768 aa-0.74□□□□□ -2.53
TRAPPC8-212ENST00000584604 URB1O60287 2271 aaKnown RBP-0.74□□□□□ -2.53
TRAPPC8-212ENST00000584604 NAP1L6A6NFF2 107 aa-0.74□□□□□ -2.53
TRAPPC8-212ENST00000584604 LOC730098B7Z3J9 87 aa-0.74□□□□□ -2.53
TRAPPC8-212ENST00000584604 TRAPPC2P0DI81 140 aa-0.74□□□□□ -2.53
TRAPPC8-212ENST00000584604 TRAPPC2BP0DI82 140 aa-0.74□□□□□ -2.53
TRAPPC8-212ENST00000584604 FXYD6Q9H0Q3 95 aa-0.74□□□□□ -2.53
TRAPPC8-212ENST00000584604 CHD8Q9HCK8 2581 aa-0.75□□□□□ -2.53
TRAPPC8-212ENST00000584604 PRO1933Q9H354 126 aa-0.75□□□□□ -2.53
TRAPPC8-212ENST00000584604 PRO1854Q9UHT4 67 aa-0.75□□□□□ -2.53
TRAPPC8-212ENST00000584604 S100A1P23297 94 aa-0.76□□□□□ -2.53
TRAPPC8-212ENST00000584604 EIF4G3O43432 1585 aaKnown RBP-0.76□□□□□ -2.53
TRAPPC8-212ENST00000584604 DIP2CQ9Y2E4 1556 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms