RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 IGHV1-58A0A0C4DH39 117 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 SMIM1B2RUZ4 78 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 G3V4G9 280 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 H3BRM9 83 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 H7C423 109 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 PAX4O43316 350 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 ATP5G1P05496 136 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 PTTG1IPP53801 180 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 HERVK_113P63121 156 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 LINC00242Q5T6M2 205 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 VSIG2Q96IQ7 327 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 CHCHD5Q9BSY4 110 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 C11orf68Q9H3H3 251 aaKnown RBP3.84□□□□□ -1.79
CRLF3-204ENST00000583527 CDC42SE2Q9NRR3 84 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 SPANXB1Q9NS25 103 aaPredicted RBP3.84□□□□□ -1.79
CRLF3-204ENST00000583527 CDKN2A-AS1Q9UH64 79 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 TRAV26-1A0A087WT03 109 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 TMEM238LA0A1B0GVL6 79 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 A0A1B0GWB2 263 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 C9orf118A6NHY6 69 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 A6NJY4 79 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 A8MZ25 164 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 TMEM238C9JI98 176 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 HTN3P15516 51 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 TIRAPP58753 221 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 VAMP3Q15836 100 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 SAMD5Q5TGI4 173 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 ZFAND6Q6FIF0 208 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 FAM19A3Q7Z5A8 133 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 ATP6V0E2Q8NHE4 81 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 NAA38Q9BRA0 125 aaKnown RBP3.83□□□□□ -1.8
CRLF3-204ENST00000583527 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
CRLF3-204ENST00000583527 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 A0A096LPF7 62 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 A0A0J9YXY3 114 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 F5H768 121 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 H3BUT2 72 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 NDUFA1O15239 70 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 SPART-AS1P0CW21 52 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 COX6A2Q02221 97 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 CLPSL2Q6UWE3 100 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 RAB37Q96AX2 223 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 LITAFQ99732 161 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 ICOSQ9Y6W8 199 aa3.82□□□□□ -1.8
CRLF3-204ENST00000583527 IGKV3OR2-268A0A0C4DH90 116 aa3.81□□□□□ -1.8
CRLF3-204ENST00000583527 A0A1W2PPM0 123 aa3.81□□□□□ -1.8
CRLF3-204ENST00000583527 K7EP34 96 aa3.81□□□□□ -1.8
CRLF3-204ENST00000583527 IGHV3-30P01768 117 aa3.81□□□□□ -1.8
CRLF3-204ENST00000583527 SMIM13P0DJ93 91 aa3.81□□□□□ -1.8
CRLF3-204ENST00000583527 IGHV3-30-5P0DP03 117 aa3.81□□□□□ -1.8
CRLF3-204ENST00000583527 RBX1P62877 108 aa3.81□□□□□ -1.8
CRLF3-204ENST00000583527 MIAQ16674 131 aa3.81□□□□□ -1.8
CRLF3-204ENST00000583527 PLECQ15149 4684 aaKnown RBP3.81□□□□□ -1.8
CRLF3-204ENST00000583527 VPS13DQ5THJ4 4388 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 TIMM17BO60830 172 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 TSPAN13O95857 204 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
CRLF3-204ENST00000583527 UBE2V1Q13404 147 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 C12orf74Q32Q52 190 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 Q6ZTC4 211 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 ZNF625Q96I27 306 aaPredicted RBP3.8□□□□□ -1.8
CRLF3-204ENST00000583527 SPANXDQ9BXN6 97 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 Q9H8V8 135 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 SPANXCQ9NY87 97 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 SPCS1Q9Y6A9 102 aa3.8□□□□□ -1.8
CRLF3-204ENST00000583527 A0A0B4J2C4 111 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 A0A0J9YWU9 116 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 CCL25O15444 150 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 EIF4EBP3O60516 100 aaPredicted RBP3.79□□□□□ -1.8
CRLF3-204ENST00000583527 FABP2P12104 132 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 MRPL23Q16540 153 aaKnown RBP3.79□□□□□ -1.8
CRLF3-204ENST00000583527 LELP1Q5T871 98 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 SH2D6Q7Z4S9 175 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 PGPEP1Q9NXJ5 209 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 COL7A1Q02388 2944 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 DNAH7Q8WXX0 4024 aa3.79□□□□□ -1.8
CRLF3-204ENST00000583527 A0A087WZ39 114 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 IGHV3OR16-9A0A0B4J2B5 98 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 LINC00959A0A1B0GUT2 108 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 A0A1B0GUV1 79 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 A4D1N5 150 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 IGLL5B9A064 214 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 TMEM262E9PQX1 116 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 K7EIL1 84 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 APOMO95445 188 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 PRB2P02812 416 aaPredicted RBP3.78□□□□□ -1.8
CRLF3-204ENST00000583527 XCL1P47992 114 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 RPL24P83731 157 aaKnown RBP3.78□□□□□ -1.8
CRLF3-204ENST00000583527 KPRPQ5T749 579 aaPredicted RBP3.78□□□□□ -1.8
CRLF3-204ENST00000583527 GTF2H5Q6ZYL4 71 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 COX7B2Q8TF08 81 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 SPATA25Q9BR10 227 aa3.78□□□□□ -1.8
CRLF3-204ENST00000583527 DNAH10Q8IVF4 4471 aa3.77□□□□□ -1.81
CRLF3-204ENST00000583527 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.77□□□□□ -1.81
CRLF3-204ENST00000583527 ANGP03950 147 aaKnown RBP3.77□□□□□ -1.81
CRLF3-204ENST00000583527 NANOS2P60321 138 aaKnown RBP3.77□□□□□ -1.81
CRLF3-204ENST00000583527 NPC2P61916 151 aa3.77□□□□□ -1.81
CRLF3-204ENST00000583527 HERV-K104P63124 156 aa3.77□□□□□ -1.81
CRLF3-204ENST00000583527 MEIG1Q5JSS6 88 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms