RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SETXQ7Z333 2677 aaKnown RBP-0.78□□□□□ -2.53
SMARCE1-219ENST00000583294 LOC285095A0A1B0GVY8 99 aa-0.78□□□□□ -2.53
SMARCE1-219ENST00000583294 SSSCA1O60232 199 aa-0.78□□□□□ -2.53
SMARCE1-219ENST00000583294 SFT2D2O95562 160 aa-0.78□□□□□ -2.53
SMARCE1-219ENST00000583294 HMGN1P05114 100 aa-0.78□□□□□ -2.53
SMARCE1-219ENST00000583294 FLNBO75369 2602 aaKnown RBP-0.78□□□□□ -2.53
SMARCE1-219ENST00000583294 BTAF1O14981 1849 aa-0.78□□□□□ -2.53
SMARCE1-219ENST00000583294 TCHHQ07283 1943 aa-0.79□□□□□ -2.54
SMARCE1-219ENST00000583294 AKAIN1P0CW23 69 aa-0.79□□□□□ -2.54
SMARCE1-219ENST00000583294 FXYD6Q9H0Q3 95 aa-0.79□□□□□ -2.54
SMARCE1-219ENST00000583294 ROBO1Q9Y6N7 1651 aa-0.79□□□□□ -2.54
SMARCE1-219ENST00000583294 POLA1P09884 1462 aaPredicted RBP-0.8□□□□□ -2.54
SMARCE1-219ENST00000583294 NBEAL1Q6ZS30 2694 aa-0.8□□□□□ -2.54
SMARCE1-219ENST00000583294 M0R2T5 61 aa-0.8□□□□□ -2.54
SMARCE1-219ENST00000583294 KRTAP20-2Q3LI61 65 aa-0.8□□□□□ -2.54
SMARCE1-219ENST00000583294 MRPL54Q6P161 138 aaKnown RBP-0.8□□□□□ -2.54
SMARCE1-219ENST00000583294 MYOZ3Q8TDC0 251 aa-0.8□□□□□ -2.54
SMARCE1-219ENST00000583294 GAPVD1Q14C86 1478 aa-0.8□□□□□ -2.54
SMARCE1-219ENST00000583294 LAMA5O15230 3695 aa-0.81□□□□□ -2.54
SMARCE1-219ENST00000583294 CHKB-CPT1BH3BT56 60 aa-0.81□□□□□ -2.54
SMARCE1-219ENST00000583294 NF1P21359 2839 aa-0.82□□□□□ -2.54
SMARCE1-219ENST00000583294 OOSP1A8MZH6 123 aa-0.82□□□□□ -2.54
SMARCE1-219ENST00000583294 MGPP08493 103 aa-0.82□□□□□ -2.54
SMARCE1-219ENST00000583294 SPRR2AP35326 72 aa-0.82□□□□□ -2.54
SMARCE1-219ENST00000583294 TMEM263Q8WUH6 116 aaKnown RBP-0.82□□□□□ -2.54
SMARCE1-219ENST00000583294 URB1O60287 2271 aaKnown RBP-0.82□□□□□ -2.54
SMARCE1-219ENST00000583294 KTN1Q86UP2 1357 aaKnown RBP-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 CREBBPQ92793 2442 aa-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 CHD8Q9HCK8 2581 aa-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 ARHGEF12Q9NZN5 1544 aa-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 QRICH2Q9H0J4 1663 aa-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 TRBV7-4A0A0J9YYF1 115 aa-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 MT4P47944 62 aa-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 SHROOM2Q13796 1616 aa-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 RAPGEF6Q8TEU7 1601 aa-0.83□□□□□ -2.54
SMARCE1-219ENST00000583294 MYOM1P52179 1685 aa-0.84□□□□□ -2.54
SMARCE1-219ENST00000583294 DEFB105AQ8NG35 78 aa-0.84□□□□□ -2.54
SMARCE1-219ENST00000583294 C1orf54Q8WWF1 131 aa-0.84□□□□□ -2.54
SMARCE1-219ENST00000583294 FAIMQ9NVQ4 179 aa-0.84□□□□□ -2.54
SMARCE1-219ENST00000583294 NSD3Q9BZ95 1437 aa-0.84□□□□□ -2.54
SMARCE1-219ENST00000583294 KDM5AP29375 1690 aaKnown RBP-0.84□□□□□ -2.54
SMARCE1-219ENST00000583294 FAT1Q14517 4588 aa-0.85□□□□□ -2.55
SMARCE1-219ENST00000583294 C9orf153Q5TBE3 101 aa-0.85□□□□□ -2.55
SMARCE1-219ENST00000583294 PP6455Q8WZ26 134 aa-0.85□□□□□ -2.55
SMARCE1-219ENST00000583294 SPRR4Q96PI1 79 aa-0.85□□□□□ -2.55
SMARCE1-219ENST00000583294 PKHD1P08F94 4074 aa-0.85□□□□□ -2.55
SMARCE1-219ENST00000583294 ROCK2O75116 1388 aaKnown RBP-0.85□□□□□ -2.55
SMARCE1-219ENST00000583294 IQSEC2Q5JU85 1478 aa-0.86□□□□□ -2.55
SMARCE1-219ENST00000583294 IGLC1P0CG04 106 aa-0.86□□□□□ -2.55
SMARCE1-219ENST00000583294 KLK9Q2XQG4 91 aa-0.86□□□□□ -2.55
SMARCE1-219ENST00000583294 KRTAP6-2Q3LI66 62 aa-0.86□□□□□ -2.55
SMARCE1-219ENST00000583294 C10orf113Q5VZT2 155 aa-0.86□□□□□ -2.55
SMARCE1-219ENST00000583294 NXT2Q9NPJ8 142 aaKnown RBP-0.86□□□□□ -2.55
SMARCE1-219ENST00000583294 TULP4Q9NRJ4 1543 aa-0.86□□□□□ -2.55
SMARCE1-219ENST00000583294 ZFHX3Q15911 3703 aa-0.86□□□□□ -2.55
SMARCE1-219ENST00000583294 ARHGEF5Q12774 1597 aa-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 SVEP1Q4LDE5 3571 aa-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 CNOT1A5YKK6 2376 aaKnown RBP-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 SPRR2EP22531 72 aa-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 UBA52P62987 128 aaKnown RBP-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 WHAMMP3Q1A5X7 153 aa-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 UQCR10Q9UDW1 63 aa-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 FLGP20930 4061 aaPredicted RBP-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 A2ML1A8K2U0 1454 aa-0.87□□□□□ -2.55
SMARCE1-219ENST00000583294 LINC00959A0A1B0GUT2 108 aa-0.88□□□□□ -2.55
SMARCE1-219ENST00000583294 SYS1-DBNDD2H3BUS1 97 aa-0.88□□□□□ -2.55
SMARCE1-219ENST00000583294 COX8AP10176 69 aa-0.88□□□□□ -2.55
SMARCE1-219ENST00000583294 USMG5Q96IX5 58 aa-0.88□□□□□ -2.55
SMARCE1-219ENST00000583294 SNAPC5O75971 98 aa-0.89□□□□□ -2.55
SMARCE1-219ENST00000583294 CDC42SE2Q9NRR3 84 aa-0.89□□□□□ -2.55
SMARCE1-219ENST00000583294 CUL7Q14999 1698 aa-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 SETBP1Q9Y6X0 1596 aa-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 MAGI1Q96QZ7 1491 aaPredicted RBP-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 UBE2L5PA0A1B0GUS4 154 aa-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 UBE2L3P68036 154 aaKnown RBP-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 FAM223AQ8IWN6 122 aa-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 FDCSPQ8NFU4 85 aa-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 ARL2-SNX15V9GYD0 113 aa-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 SMG6Q86US8 1419 aaKnown RBP-0.9□□□□□ -2.55
SMARCE1-219ENST00000583294 TGP01266 2768 aa-0.91□□□□□ -2.55
SMARCE1-219ENST00000583294 LINC01600Q96MT4 127 aa-0.91□□□□□ -2.56
SMARCE1-219ENST00000583294 PRO1933Q9H354 126 aa-0.91□□□□□ -2.56
SMARCE1-219ENST00000583294 DNAJC13O75165 2243 aa-0.92□□□□□ -2.56
SMARCE1-219ENST00000583294 GNG11P61952 73 aa-0.92□□□□□ -2.56
SMARCE1-219ENST00000583294 FAM167A-AS1Q96KT0 104 aa-0.92□□□□□ -2.56
SMARCE1-219ENST00000583294 HERC2O95714 4834 aa-0.92□□□□□ -2.56
SMARCE1-219ENST00000583294 KIAA0556O60303 1618 aa-0.93□□□□□ -2.56
SMARCE1-219ENST00000583294 SETD2Q9BYW2 2564 aaPredicted RBP-0.93□□□□□ -2.56
SMARCE1-219ENST00000583294 APLNQ9ULZ1 77 aa-0.93□□□□□ -2.56
SMARCE1-219ENST00000583294 RYR3Q15413 4870 aa-0.93□□□□□ -2.56
SMARCE1-219ENST00000583294 HMGXB3Q12766 1538 aa-0.94□□□□□ -2.56
SMARCE1-219ENST00000583294 RPL13AP3Q6NVV1 102 aa-0.94□□□□□ -2.56
SMARCE1-219ENST00000583294 PCNX1Q96RV3 2341 aa-0.94□□□□□ -2.56
SMARCE1-219ENST00000583294 MXRA5Q9NR99 2828 aa-0.94□□□□□ -2.56
SMARCE1-219ENST00000583294 FAM24AA6NFZ4 105 aa-0.95□□□□□ -2.56
SMARCE1-219ENST00000583294 CPSF4LA6NMK7 179 aaKnown RBP-0.95□□□□□ -2.56
SMARCE1-219ENST00000583294 DEFB135Q30KP9 77 aa-0.95□□□□□ -2.56
SMARCE1-219ENST00000583294 DPH3P1Q9H4G8 78 aa-0.95□□□□□ -2.56
SMARCE1-219ENST00000583294 TET3O43151 1660 aa-0.95□□□□□ -2.56
SMARCE1-219ENST00000583294 A0A1B0GWA3 101 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms