RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 PRR34Q9NV39 138 aa5.89□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IGLV4-3A0A075B6K6 122 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 A0A096LNJ9 63 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 PLNP26678 52 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 LINC00310P59036 64 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 RPL39P62891 51 aaKnown RBP5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 HERVK_113P63121 156 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 REG3AQ06141 175 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 PET117Q6UWS5 81 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 FAM19A3Q7Z5A8 133 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 FAM19A2Q8N3H0 131 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 TM2D2Q9BX73 214 aa5.88□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IFITM10A6NMD0 228 aa5.87□□□□□ -1.47
PDLIM1P3-201ENST00000582370 EREGO14944 169 aa5.87□□□□□ -1.47
PDLIM1P3-201ENST00000582370 HIST1H2BLQ99880 126 aa5.87□□□□□ -1.47
PDLIM1P3-201ENST00000582370 KRTAP1-5Q9BYS1 174 aa5.87□□□□□ -1.47
PDLIM1P3-201ENST00000582370 F8VRH5 84 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 SYS1-DBNDD2H3BUS1 97 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 NUPR1O60356 82 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IGHV3-30P01768 117 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IGHV3-33P01772 117 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IGHV3-30-3P0DP02 117 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IGHV3-30-5P0DP03 117 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 FABP4P15090 132 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 PMCHL1Q16048 86 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 LINC01561Q8N1V8 128 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 LINC00269Q8N2A0 174 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 BAALCQ8WXS3 180 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 C1orf43Q9BWL3 253 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 CST9LQ9H4G1 147 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 KLK12Q9UKR0 248 aa5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 TMA7Q9Y2S6 64 aaKnown RBP5.86□□□□□ -1.47
PDLIM1P3-201ENST00000582370 IGLV4-60A0A075B6I1 120 aa5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 LINC00959A0A1B0GUT2 108 aa5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 TINCRA0A1B0GVN0 87 aa5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 H3BRM9 83 aa5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 SFTA2Q6UW10 78 aa5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 CD164L2Q6UWJ8 174 aa5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 Q8N976 141 aa5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 GEMIN7Q9H840 131 aaKnown RBP5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 CHTOPQ9Y3Y2 248 aaKnown RBP5.85□□□□□ -1.47
PDLIM1P3-201ENST00000582370 APOMO95445 188 aa5.84□□□□□ -1.47
PDLIM1P3-201ENST00000582370 UBE2D1P51668 147 aa5.84□□□□□ -1.47
PDLIM1P3-201ENST00000582370 KRTAP10-1P60331 282 aa5.84□□□□□ -1.47
PDLIM1P3-201ENST00000582370 CFAP161Q6P656 301 aa5.84□□□□□ -1.47
PDLIM1P3-201ENST00000582370 Q6ZUT4 128 aa5.84□□□□□ -1.47
PDLIM1P3-201ENST00000582370 UBE2WQ96B02 151 aa5.84□□□□□ -1.47
PDLIM1P3-201ENST00000582370 F8WDY8 70 aa5.83□□□□□ -1.48
PDLIM1P3-201ENST00000582370 DPM2O94777 84 aa5.83□□□□□ -1.48
PDLIM1P3-201ENST00000582370 IGLC3P0DOY3 106 aa5.83□□□□□ -1.48
PDLIM1P3-201ENST00000582370 KRTDAPP60985 99 aa5.83□□□□□ -1.48
PDLIM1P3-201ENST00000582370 LINC01545Q5VT33 79 aa5.83□□□□□ -1.48
PDLIM1P3-201ENST00000582370 Q6ZRN7 208 aaPredicted RBP5.83□□□□□ -1.48
PDLIM1P3-201ENST00000582370 DEFB104AQ8WTQ1 72 aa5.83□□□□□ -1.48
PDLIM1P3-201ENST00000582370 IGLV5-45A0A087WSX0 123 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 TRAV13-1A0A0B4J241 112 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 IGKCP01834 107 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 C3orf79P0CE67 100 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 FUSP35637 526 aaKnown RBP eCLIP5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 HERVK_113P61574 105 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 LRP2P98164 4655 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 ODF1Q14990 250 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 C14orf177Q52M58 125 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 ENHOQ6UWT2 76 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 LINC00173Q6ZV60 143 aa5.82□□□□□ -1.48
PDLIM1P3-201ENST00000582370 A0A087WZ39 114 aa5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 HSBP1L1C9JCN9 74 aa5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 COX7A2LO14548 114 aa5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 PSCAO43653 123 aa5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 PLA2G1BP04054 148 aaKnown RBP5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 MALP21145 153 aa5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 LINC00242Q5T6M2 205 aa5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 CHCHD10Q8WYQ3 142 aaPredicted RBP5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 FAM104AQ969W3 186 aa5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 CHAC1Q9BUX1 264 aa5.81□□□□□ -1.48
PDLIM1P3-201ENST00000582370 IGKV2D-24A0A075B6R9 120 aa5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 IGHV3OR16-9A0A0B4J2B5 98 aa5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 C11orf86A6NJI1 115 aa5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 GCSHP23434 173 aa5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 JOSD1Q15040 202 aaPredicted RBP5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 OR10D4PQ8NGN7 298 aa5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 OPRPNQ99935 248 aaPredicted RBP5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 MRPL35Q9NZE8 188 aaKnown RBP5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 PKIGQ9Y2B9 76 aa5.8□□□□□ -1.48
PDLIM1P3-201ENST00000582370 IGHV1-58A0A0C4DH39 117 aa5.79□□□□□ -1.48
PDLIM1P3-201ENST00000582370 IGKV3OR2-268A0A0C4DH90 116 aa5.79□□□□□ -1.48
PDLIM1P3-201ENST00000582370 H0Y8G0 127 aa5.79□□□□□ -1.48
PDLIM1P3-201ENST00000582370 SCGB1D1O95968 90 aa5.79□□□□□ -1.48
PDLIM1P3-201ENST00000582370 XCL1P47992 114 aa5.79□□□□□ -1.48
PDLIM1P3-201ENST00000582370 HAMPP81172 84 aa5.79□□□□□ -1.48
PDLIM1P3-201ENST00000582370 LINC00469Q8N7U9 141 aa5.79□□□□□ -1.48
PDLIM1P3-201ENST00000582370 IGLV4-69A0A075B6H9 119 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 A0A087WTM6 91 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 A0A0J9YXV3 536 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 LINC00587B1AMM8 73 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 OXTP01178 125 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 CXCL5P42830 114 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 FOXI1Q12951 378 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 RNASE13Q5GAN3 156 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms