RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 SCGB3A1Q96QR1 104 aa6.79□□□□□ -1.32
TOP3A-212ENST00000582122 AMELXQ99217 191 aa6.79□□□□□ -1.32
TOP3A-212ENST00000582122 DNAH5Q8TE73 4624 aa6.78□□□□□ -1.32
TOP3A-212ENST00000582122 IGHV3-64A0A075B6Q5 118 aa6.78□□□□□ -1.32
TOP3A-212ENST00000582122 LINC01561Q8N1V8 128 aa6.78□□□□□ -1.32
TOP3A-212ENST00000582122 OR10D4PQ8NGN7 298 aa6.78□□□□□ -1.32
TOP3A-212ENST00000582122 C18orf32Q8TCD1 76 aa6.78□□□□□ -1.32
TOP3A-212ENST00000582122 IGHV3OR16-9A0A0B4J2B5 98 aa6.77□□□□□ -1.33
TOP3A-212ENST00000582122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.77□□□□□ -1.33
TOP3A-212ENST00000582122 FUSP35637 526 aaKnown RBP eCLIP6.77□□□□□ -1.33
TOP3A-212ENST00000582122 UBE2D1P51668 147 aa6.77□□□□□ -1.33
TOP3A-212ENST00000582122 Q6ZSA8 131 aa6.77□□□□□ -1.33
TOP3A-212ENST00000582122 FAM104AQ969W3 186 aa6.77□□□□□ -1.33
TOP3A-212ENST00000582122 CHCHD1Q96BP2 118 aaKnown RBP6.77□□□□□ -1.33
TOP3A-212ENST00000582122 OPRPNQ99935 248 aaPredicted RBP6.77□□□□□ -1.33
TOP3A-212ENST00000582122 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
TOP3A-212ENST00000582122 ATP5LO75964 103 aa6.76□□□□□ -1.33
TOP3A-212ENST00000582122 HBDP02042 147 aa6.76□□□□□ -1.33
TOP3A-212ENST00000582122 HERVK_113P63121 156 aa6.76□□□□□ -1.33
TOP3A-212ENST00000582122 LINC00242Q5T6M2 205 aa6.76□□□□□ -1.33
TOP3A-212ENST00000582122 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
TOP3A-212ENST00000582122 C2orf48Q96LS8 159 aa6.76□□□□□ -1.33
TOP3A-212ENST00000582122 A0A087WZ39 114 aa6.75□□□□□ -1.33
TOP3A-212ENST00000582122 HIGD2BQ4VC39 106 aa6.75□□□□□ -1.33
TOP3A-212ENST00000582122 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
TOP3A-212ENST00000582122 GEMIN7Q9H840 131 aaKnown RBP6.75□□□□□ -1.33
TOP3A-212ENST00000582122 LINC00474Q9P2X8 69 aa6.75□□□□□ -1.33
TOP3A-212ENST00000582122 XGP55808 180 aa6.74□□□□□ -1.33
TOP3A-212ENST00000582122 SYCNQ0VAF6 134 aa6.74□□□□□ -1.33
TOP3A-212ENST00000582122 PMVKQ15126 192 aa6.74□□□□□ -1.33
TOP3A-212ENST00000582122 SDIM1Q6ZPB5 146 aa6.74□□□□□ -1.33
TOP3A-212ENST00000582122 LINC00173Q6ZV60 143 aa6.74□□□□□ -1.33
TOP3A-212ENST00000582122 BAGE3Q86Y29 109 aa6.74□□□□□ -1.33
TOP3A-212ENST00000582122 CARD19Q96LW7 228 aa6.74□□□□□ -1.33
TOP3A-212ENST00000582122 CHAC1Q9BUX1 264 aa6.74□□□□□ -1.33
TOP3A-212ENST00000582122 IGLV4-69A0A075B6H9 119 aa6.73□□□□□ -1.33
TOP3A-212ENST00000582122 COLCA2A8K830 154 aa6.73□□□□□ -1.33
TOP3A-212ENST00000582122 TRGC2P03986 189 aa6.73□□□□□ -1.33
TOP3A-212ENST00000582122 SPAG11BQ08648 103 aa6.73□□□□□ -1.33
TOP3A-212ENST00000582122 ORAOV1Q8WV07 137 aa6.73□□□□□ -1.33
TOP3A-212ENST00000582122 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
TOP3A-212ENST00000582122 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
TOP3A-212ENST00000582122 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
TOP3A-212ENST00000582122 HSBP1O75506 76 aa6.72□□□□□ -1.33
TOP3A-212ENST00000582122 SLPIP03973 132 aa6.72□□□□□ -1.33
TOP3A-212ENST00000582122 S100A1P23297 94 aa6.72□□□□□ -1.33
TOP3A-212ENST00000582122 RNF151Q2KHN1 245 aa6.72□□□□□ -1.33
TOP3A-212ENST00000582122 PACRGQ96M98 296 aaPredicted RBP6.72□□□□□ -1.33
TOP3A-212ENST00000582122 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
TOP3A-212ENST00000582122 H3BRM9 83 aa6.71□□□□□ -1.34
TOP3A-212ENST00000582122 NDUFA1O15239 70 aa6.71□□□□□ -1.34
TOP3A-212ENST00000582122 PRSS2P07478 247 aa6.71□□□□□ -1.34
TOP3A-212ENST00000582122 LINC01620Q4KN68 170 aa6.71□□□□□ -1.34
TOP3A-212ENST00000582122 PDZD11Q5EBL8 140 aa6.71□□□□□ -1.34
TOP3A-212ENST00000582122 DPH3Q96FX2 82 aa6.71□□□□□ -1.34
TOP3A-212ENST00000582122 URB1-AS1Q96HZ7 61 aa6.71□□□□□ -1.34
TOP3A-212ENST00000582122 FAM30AQ9NZY2 134 aa6.71□□□□□ -1.34
TOP3A-212ENST00000582122 LOC107984640A0A0U1RRK4 108 aa6.7□□□□□ -1.34
TOP3A-212ENST00000582122 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
TOP3A-212ENST00000582122 COX6A2Q02221 97 aa6.7□□□□□ -1.34
TOP3A-212ENST00000582122 CIRBPQ14011 172 aaKnown RBP6.7□□□□□ -1.34
TOP3A-212ENST00000582122 MRPL35Q9NZE8 188 aaKnown RBP6.7□□□□□ -1.34
TOP3A-212ENST00000582122 IGLV5-45A0A087WSX0 123 aa6.69□□□□□ -1.34
TOP3A-212ENST00000582122 A0A096LNJ9 63 aa6.69□□□□□ -1.34
TOP3A-212ENST00000582122 CXCL5P42830 114 aa6.69□□□□□ -1.34
TOP3A-212ENST00000582122 SCXQ7RTU7 201 aa6.69□□□□□ -1.34
TOP3A-212ENST00000582122 Q8IZM0 81 aa6.69□□□□□ -1.34
TOP3A-212ENST00000582122 LINC00469Q8N7U9 141 aa6.69□□□□□ -1.34
TOP3A-212ENST00000582122 CIRBP-AS1Q8TBR5 109 aa6.69□□□□□ -1.34
TOP3A-212ENST00000582122 A0A0J9YXV3 536 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 TRBV30A0A0K0K1B3 111 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
TOP3A-212ENST00000582122 NDUFA6P56556 154 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 CKS1BP61024 79 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 ZC2HC1BQ5TFG8 222 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 Q6ZRU5 148 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 IFI27L1Q96BM0 104 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 CDKN2A-AS1Q9UH64 79 aa6.68□□□□□ -1.34
TOP3A-212ENST00000582122 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
TOP3A-212ENST00000582122 IGLC3P0DOY3 106 aa6.67□□□□□ -1.34
TOP3A-212ENST00000582122 PMCHL1Q16048 86 aa6.67□□□□□ -1.34
TOP3A-212ENST00000582122 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
TOP3A-212ENST00000582122 LINC00526Q96FQ7 95 aa6.67□□□□□ -1.34
TOP3A-212ENST00000582122 HSPB8Q9UJY1 196 aa6.67□□□□□ -1.34
TOP3A-212ENST00000582122 SERF1AO75920 110 aa6.66□□□□□ -1.34
TOP3A-212ENST00000582122 TLX1NBP0CAT3 122 aa6.66□□□□□ -1.34
TOP3A-212ENST00000582122 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
TOP3A-212ENST00000582122 SFTA2Q6UW10 78 aa6.66□□□□□ -1.34
TOP3A-212ENST00000582122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
TOP3A-212ENST00000582122 LEPROTL1O95214 131 aa6.65□□□□□ -1.34
TOP3A-212ENST00000582122 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.34
TOP3A-212ENST00000582122 PTTG1IPP53801 180 aa6.65□□□□□ -1.34
TOP3A-212ENST00000582122 MAJINQ3KP22 176 aa6.65□□□□□ -1.34
TOP3A-212ENST00000582122 Q5VSD8 79 aa6.65□□□□□ -1.34
TOP3A-212ENST00000582122 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.34
TOP3A-212ENST00000582122 TOMM7Q9P0U1 55 aa6.65□□□□□ -1.34
TOP3A-212ENST00000582122 A0A087WYN8 130 aa6.64□□□□□ -1.35
TOP3A-212ENST00000582122 IGKV2-24A0A0C4DH68 120 aa6.64□□□□□ -1.35
TOP3A-212ENST00000582122 SMIM1B2RUZ4 78 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms