RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 PKDREJQ9NTG1 2253 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 EGFEM1PQ0D2K5 195 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 SHISA2Q6UWI4 295 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 AKAP6Q13023 2319 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 LINC00208Q96KT6 92 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 A0A096LNJ9 63 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 EDN2P20800 178 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 REG3GQ6UW15 175 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 UNQ6190/PRO20217Q6UXQ8 127 aa10.48□□□□□ -0.73
CSNK1D-217ENST00000581241 POLEQ07864 2286 aa10.47□□□□□ -0.73
CSNK1D-217ENST00000581241 C9orf116Q5BN46 136 aaPredicted RBP10.46□□□□□ -0.73
CSNK1D-217ENST00000581241 LINC01006Q8NI28 216 aa10.46□□□□□ -0.73
CSNK1D-217ENST00000581241 CEP290O15078 2479 aa10.46□□□□□ -0.73
CSNK1D-217ENST00000581241 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
CSNK1D-217ENST00000581241 TRBV7-7A0A0K0K1E9 115 aa10.46□□□□□ -0.74
CSNK1D-217ENST00000581241 NCOA6Q14686 2063 aaPredicted RBP10.46□□□□□ -0.74
CSNK1D-217ENST00000581241 Q8N3U1 123 aa10.45□□□□□ -0.74
CSNK1D-217ENST00000581241 PRR3P79522 188 aaKnown RBP10.44□□□□□ -0.74
CSNK1D-217ENST00000581241 SPTA1P02549 2419 aa10.44□□□□□ -0.74
CSNK1D-217ENST00000581241 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
CSNK1D-217ENST00000581241 ZNF580Q9UK33 172 aa10.44□□□□□ -0.74
CSNK1D-217ENST00000581241 NANOS2P60321 138 aaKnown RBP10.43□□□□□ -0.74
CSNK1D-217ENST00000581241 Q6ZVQ6 151 aa10.42□□□□□ -0.74
CSNK1D-217ENST00000581241 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
CSNK1D-217ENST00000581241 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
CSNK1D-217ENST00000581241 F8WDY8 70 aa10.41□□□□□ -0.74
CSNK1D-217ENST00000581241 LY6G6DO95868 133 aa10.41□□□□□ -0.74
CSNK1D-217ENST00000581241 CDIP1Q9H305 208 aa10.41□□□□□ -0.74
CSNK1D-217ENST00000581241 LINC00575Q6W349 94 aa10.41□□□□□ -0.74
CSNK1D-217ENST00000581241 FHL2Q14192 279 aa10.41□□□□□ -0.74
CSNK1D-217ENST00000581241 PSPHP1O15172 72 aa10.4□□□□□ -0.74
CSNK1D-217ENST00000581241 DSCAML1Q8TD84 2053 aa10.4□□□□□ -0.74
CSNK1D-217ENST00000581241 PCNX3Q9H6A9 2034 aa10.4□□□□□ -0.74
CSNK1D-217ENST00000581241 H0Y9P7 68 aa10.4□□□□□ -0.74
CSNK1D-217ENST00000581241 LINC01561Q8N1V8 128 aa10.4□□□□□ -0.74
CSNK1D-217ENST00000581241 CEP192Q8TEP8 1941 aa10.4□□□□□ -0.74
CSNK1D-217ENST00000581241 LINC01547P58512 204 aaPredicted RBP10.4□□□□□ -0.75
CSNK1D-217ENST00000581241 ODF3L2Q3SX64 289 aa10.4□□□□□ -0.75
CSNK1D-217ENST00000581241 WNK2Q9Y3S1 2297 aa10.4□□□□□ -0.75
CSNK1D-217ENST00000581241 M0R2N4 97 aa10.4□□□□□ -0.75
CSNK1D-217ENST00000581241 EML5Q05BV3 1969 aa10.39□□□□□ -0.75
CSNK1D-217ENST00000581241 HCFC1P51610 2035 aa10.39□□□□□ -0.75
CSNK1D-217ENST00000581241 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
CSNK1D-217ENST00000581241 IGHV6-1A0A0B4J1U7 121 aa10.38□□□□□ -0.75
CSNK1D-217ENST00000581241 MED12LQ86YW9 2145 aa10.38□□□□□ -0.75
CSNK1D-217ENST00000581241 LINC00846Q9NV44 126 aa10.38□□□□□ -0.75
CSNK1D-217ENST00000581241 CXCL6P80162 114 aa10.38□□□□□ -0.75
CSNK1D-217ENST00000581241 BEAN1Q3B7T3 259 aa10.38□□□□□ -0.75
CSNK1D-217ENST00000581241 TMEM254Q8TBM7 123 aa10.38□□□□□ -0.75
CSNK1D-217ENST00000581241 BRI3O95415 125 aa10.37□□□□□ -0.75
CSNK1D-217ENST00000581241 Q6ZSN1 163 aa10.37□□□□□ -0.75
CSNK1D-217ENST00000581241 CPAMD8Q8IZJ3 1885 aa10.37□□□□□ -0.75
CSNK1D-217ENST00000581241 C6orf223Q8N319 242 aa10.37□□□□□ -0.75
CSNK1D-217ENST00000581241 Q9BRP9 147 aa10.37□□□□□ -0.75
CSNK1D-217ENST00000581241 CADP27708 2225 aa10.37□□□□□ -0.75
CSNK1D-217ENST00000581241 SPTBN1Q01082 2364 aaKnown RBP10.36□□□□□ -0.75
CSNK1D-217ENST00000581241 HCG22E2RYF7 251 aa10.36□□□□□ -0.75
CSNK1D-217ENST00000581241 PCOTHQ58A44 107 aa10.36□□□□□ -0.75
CSNK1D-217ENST00000581241 COL6A6A6NMZ7 2263 aa10.36□□□□□ -0.75
CSNK1D-217ENST00000581241 LRP4O75096 1905 aa10.35□□□□□ -0.75
CSNK1D-217ENST00000581241 hDV103S1A0JD37 113 aa10.33□□□□□ -0.76
CSNK1D-217ENST00000581241 ROS1P08922 2347 aa10.33□□□□□ -0.76
CSNK1D-217ENST00000581241 FREM1Q5H8C1 2179 aa10.33□□□□□ -0.76
CSNK1D-217ENST00000581241 PCDH15Q96QU1 1955 aa10.33□□□□□ -0.76
CSNK1D-217ENST00000581241 A0A1B0GUV1 79 aa10.33□□□□□ -0.76
CSNK1D-217ENST00000581241 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
CSNK1D-217ENST00000581241 TANC2Q9HCD6 1990 aa10.33□□□□□ -0.76
CSNK1D-217ENST00000581241 C2orf48Q96LS8 159 aa10.33□□□□□ -0.76
CSNK1D-217ENST00000581241 AVPP01185 164 aa10.32□□□□□ -0.76
CSNK1D-217ENST00000581241 COL5A1P20908 1838 aaPredicted RBP10.32□□□□□ -0.76
CSNK1D-217ENST00000581241 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
CSNK1D-217ENST00000581241 PTPRSQ13332 1948 aa10.31□□□□□ -0.76
CSNK1D-217ENST00000581241 CRYGAP11844 174 aa10.31□□□□□ -0.76
CSNK1D-217ENST00000581241 PCNX2A6NKB5 2137 aa10.31□□□□□ -0.76
CSNK1D-217ENST00000581241 RAI1Q7Z5J4 1906 aaPredicted RBP10.3□□□□□ -0.76
CSNK1D-217ENST00000581241 RETNLBQ9BQ08 111 aa10.3□□□□□ -0.76
CSNK1D-217ENST00000581241 LINC00337Q8N6G1 96 aa10.3□□□□□ -0.76
CSNK1D-217ENST00000581241 RETNQ9HD89 108 aa10.3□□□□□ -0.76
CSNK1D-217ENST00000581241 PRO0628Q9UI54 55 aa10.29□□□□□ -0.76
CSNK1D-217ENST00000581241 A0A087WSZ3 146 aa10.29□□□□□ -0.76
CSNK1D-217ENST00000581241 CDSNQ15517 529 aa10.28□□□□□ -0.76
CSNK1D-217ENST00000581241 DEFB116Q30KQ4 102 aa10.28□□□□□ -0.76
CSNK1D-217ENST00000581241 C10orf142B7Z368 130 aa10.27□□□□□ -0.76
CSNK1D-217ENST00000581241 LY6G6CO95867 125 aa10.27□□□□□ -0.77
CSNK1D-217ENST00000581241 C16orf95Q9H693 158 aa10.27□□□□□ -0.77
CSNK1D-217ENST00000581241 LIMD2Q9BT23 127 aa10.26□□□□□ -0.77
CSNK1D-217ENST00000581241 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
CSNK1D-217ENST00000581241 BCE1O60756 84 aa10.26□□□□□ -0.77
CSNK1D-217ENST00000581241 KIF25-AS1Q9Y6Z4 181 aa10.26□□□□□ -0.77
CSNK1D-217ENST00000581241 A8MTW9 85 aa10.25□□□□□ -0.77
CSNK1D-217ENST00000581241 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
CSNK1D-217ENST00000581241 SMCPP49901 116 aaPredicted RBP10.25□□□□□ -0.77
CSNK1D-217ENST00000581241 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
CSNK1D-217ENST00000581241 LYPD5Q6UWN5 251 aa10.24□□□□□ -0.77
CSNK1D-217ENST00000581241 C1orf64Q8NEQ6 169 aa10.24□□□□□ -0.77
CSNK1D-217ENST00000581241 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
CSNK1D-217ENST00000581241 LINC01556Q5JQF7 62 aa10.23□□□□□ -0.77
CSNK1D-217ENST00000581241 IGLV5-52A0A0A0MRZ9 124 aa10.23□□□□□ -0.77
CSNK1D-217ENST00000581241 Q6ZRU5 148 aa10.22□□□□□ -0.77
CSNK1D-217ENST00000581241 SBSPONQ8IVN8 264 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms