RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 MRPS24Q96EL2 167 aaKnown RBP2.34□□□□□ -2.03
NF1-220ENST00000581113 DSCR8Q96T75 97 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 RETNLBQ9BQ08 111 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 NABP2Q9BQ15 211 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 VAMP8Q9BV40 100 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 TRAPPC1Q9Y5R8 145 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 SERP1Q9Y6X1 66 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 R4GMQ9 66 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 CMYA5Q8N3K9 4069 aa2.34□□□□□ -2.04
NF1-220ENST00000581113 H3BUX3 64 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 IGLV3-1P01715 115 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 TRACP01848 142 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 IL7P13232 177 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 FAM74A1Q5RGS3 127 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 KPRPQ5T749 579 aaPredicted RBP2.33□□□□□ -2.04
NF1-220ENST00000581113 C12orf73Q69YU5 71 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 DPPA3Q6W0C5 159 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 Q8IYB0 196 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 OR4X2Q8NGF9 303 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 MUC7Q8TAX7 377 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 LINC00526Q96FQ7 95 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 TTTY10Q9BZA0 68 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 SMDT1Q9H4I9 107 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 PKD1L1Q8TDX9 2849 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 IGKV2D-26A0A0A0MRZ7 120 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 LOC107984156A0A0G2JMH3 177 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 C3orf85A0A1B0GTC6 90 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 A6NIN4 97 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 H3BQ85 93 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 CREBL2O60519 120 aaPredicted RBP2.33□□□□□ -2.04
NF1-220ENST00000581113 PIPP12273 146 aaPredicted RBP2.33□□□□□ -2.04
NF1-220ENST00000581113 CCL3L1P16619 93 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 ARL17AQ8IVW1 177 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 AP4S1Q9Y587 144 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 MINOS1-NBL1R4GNA1 71 aa2.33□□□□□ -2.04
NF1-220ENST00000581113 DOCK11Q5JSL3 2073 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 LOC107986453A0A1B0GWG9 222 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 A6NN06 94 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 ODF3BA8MYP8 253 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 H3BSH0 61 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 SDCBPO00560 298 aaPredicted RBP2.32□□□□□ -2.04
NF1-220ENST00000581113 RBP4P02753 201 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 IGLC1P0CG04 106 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 SNCAP37840 140 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 EDDM3BP56851 147 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 SLC25A26Q70HW3 274 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 FP248Q71RG6 208 aaPredicted RBP2.32□□□□□ -2.04
NF1-220ENST00000581113 DYNAPQ8N1N2 210 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 SPANXA2-OT1Q8N9U9 137 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 OR5AK2Q8NH90 309 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 ATG5Q9H1Y0 275 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 HHLA3Q9XRX5 114 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 WNK1Q9H4A3 2382 aa2.32□□□□□ -2.04
NF1-220ENST00000581113 NOTCH1P46531 2555 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
NF1-220ENST00000581113 VWFP04275 2813 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 C11orf86A6NJI1 115 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 ZNF736B4DX44 427 aaPredicted RBP2.31□□□□□ -2.04
NF1-220ENST00000581113 TCL1BO95988 128 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 CYB5AP00167 134 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 IGLV1-51P01701 117 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 PRB4P10163 310 aaPredicted RBP2.31□□□□□ -2.04
NF1-220ENST00000581113 CKS2P33552 79 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 SNRPGP62308 76 aaKnown RBP2.31□□□□□ -2.04
NF1-220ENST00000581113 MRPS36P82909 103 aaKnown RBP2.31□□□□□ -2.04
NF1-220ENST00000581113 MINOS1Q5TGZ0 78 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 LINC01545Q5VT33 79 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 NDUFA11Q86Y39 141 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 SLC50A1Q9BRV3 221 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 CST11Q9H112 138 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 TAS2R4Q9NYW5 299 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 TPRKBQ9Y3C4 175 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 HILPDAQ9Y5L2 63 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 LINC00312Q9Y6C7 94 aa2.31□□□□□ -2.04
NF1-220ENST00000581113 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 A0A0D9SG52 128 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 RBAKDNA6NC62 111 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 J3QLW9 94 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 J3QRE1 110 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 M0R2P5 195 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 GNRH2O43555 120 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 IL4P05112 153 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 ZNF816Q0VGE8 651 aaPredicted RBP2.3□□□□□ -2.04
NF1-220ENST00000581113 LGALSLQ3ZCW2 172 aaPredicted RBP2.3□□□□□ -2.04
NF1-220ENST00000581113 S100A7L2Q5SY68 101 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 PRR9Q5T870 116 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 HEPN1Q6WQI6 88 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 Q6ZQT0 140 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 Q8N814 137 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 TSKUQ8WUA8 353 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 COPS9Q8WXC6 57 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 NPVFQ9HCQ7 196 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 TIMM9Q9Y5J7 89 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 TGP01266 2768 aa2.3□□□□□ -2.04
NF1-220ENST00000581113 TCRBV4S1A1TA0A5B7 111 aa2.29□□□□□ -2.04
NF1-220ENST00000581113 C16orf90A8MZG2 172 aa2.29□□□□□ -2.04
NF1-220ENST00000581113 TMEM262E9PQX1 116 aa2.29□□□□□ -2.04
NF1-220ENST00000581113 PIN1P1O15428 100 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms