RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
CDK5RAP3-219ENST00000580670 TIMM21Q9BVV7 248 aa9.53□□□□□ -0.88
CDK5RAP3-219ENST00000580670 J3QR89 54 aa9.52□□□□□ -0.88
CDK5RAP3-219ENST00000580670 ESRGQ1W209 222 aa9.52□□□□□ -0.88
CDK5RAP3-219ENST00000580670 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.88
CDK5RAP3-219ENST00000580670 BAALCQ8WXS3 180 aa9.52□□□□□ -0.88
CDK5RAP3-219ENST00000580670 SIGMAR1Q99720 223 aa9.52□□□□□ -0.88
CDK5RAP3-219ENST00000580670 IGLV4-3A0A075B6K6 122 aa9.52□□□□□ -0.89
CDK5RAP3-219ENST00000580670 NUPR2A6NF83 97 aa9.52□□□□□ -0.89
CDK5RAP3-219ENST00000580670 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
CDK5RAP3-219ENST00000580670 F8VRH5 84 aa9.52□□□□□ -0.89
CDK5RAP3-219ENST00000580670 TMEM101Q96IK0 257 aa9.51□□□□□ -0.89
CDK5RAP3-219ENST00000580670 CSDC2Q9Y534 153 aaKnown RBP9.51□□□□□ -0.89
CDK5RAP3-219ENST00000580670 WFDC2Q14508 124 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 RNASE13Q5GAN3 156 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 PAPPA-AS1Q5QFB9 102 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 Q6ZUT4 128 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 PRO0461Q9UI25 63 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 MYMXA0A1B0GTQ4 84 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 GAGE12HA6NDE8 117 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 PMVKQ15126 192 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 VCX2Q9H322 139 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 DNAH7Q8WXX0 4024 aa9.5□□□□□ -0.89
CDK5RAP3-219ENST00000580670 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
CDK5RAP3-219ENST00000580670 HIST1H4GQ99525 98 aa9.49□□□□□ -0.89
CDK5RAP3-219ENST00000580670 TGP01266 2768 aa9.49□□□□□ -0.89
CDK5RAP3-219ENST00000580670 IGLV4-60A0A075B6I1 120 aa9.48□□□□□ -0.89
CDK5RAP3-219ENST00000580670 CDC42SE2Q9NRR3 84 aa9.48□□□□□ -0.89
CDK5RAP3-219ENST00000580670 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
CDK5RAP3-219ENST00000580670 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
CDK5RAP3-219ENST00000580670 CCL18P55774 89 aa9.47□□□□□ -0.89
CDK5RAP3-219ENST00000580670 AMELXQ99217 191 aa9.47□□□□□ -0.89
CDK5RAP3-219ENST00000580670 H3BMG7 143 aa9.47□□□□□ -0.89
CDK5RAP3-219ENST00000580670 ZFAND6Q6FIF0 208 aa9.47□□□□□ -0.89
CDK5RAP3-219ENST00000580670 WFDC10BQ8IUB3 73 aa9.47□□□□□ -0.89
CDK5RAP3-219ENST00000580670 Q8N3U1 123 aa9.47□□□□□ -0.89
CDK5RAP3-219ENST00000580670 DYNC2H1Q8NCM8 4307 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-219ENST00000580670 LINC00588Q9Y4M8 146 aa9.46□□□□□ -0.9
CDK5RAP3-219ENST00000580670 MUC7Q8TAX7 377 aa9.45□□□□□ -0.9
CDK5RAP3-219ENST00000580670 WWC2-AS2Q96NR7 200 aa9.45□□□□□ -0.9
CDK5RAP3-219ENST00000580670 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
CDK5RAP3-219ENST00000580670 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
CDK5RAP3-219ENST00000580670 ANGP03950 147 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-219ENST00000580670 IGHV3-30-3P0DP02 117 aa9.44□□□□□ -0.9
CDK5RAP3-219ENST00000580670 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
CDK5RAP3-219ENST00000580670 ETDBQ3ZM63 59 aa9.44□□□□□ -0.9
CDK5RAP3-219ENST00000580670 IGKV3OR2-268A0A0C4DH90 116 aa9.43□□□□□ -0.9
CDK5RAP3-219ENST00000580670 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
CDK5RAP3-219ENST00000580670 A6NJY4 79 aa9.43□□□□□ -0.9
CDK5RAP3-219ENST00000580670 UBE2D1P51668 147 aa9.43□□□□□ -0.9
CDK5RAP3-219ENST00000580670 CSMD3Q7Z407 3707 aa9.43□□□□□ -0.9
CDK5RAP3-219ENST00000580670 IGLV4-69A0A075B6H9 119 aa9.42□□□□□ -0.9
CDK5RAP3-219ENST00000580670 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
CDK5RAP3-219ENST00000580670 A0A0J9YXV3 536 aa9.42□□□□□ -0.9
CDK5RAP3-219ENST00000580670 CLPSL2Q6UWE3 100 aa9.42□□□□□ -0.9
CDK5RAP3-219ENST00000580670 UBE2DNLQ8IWF7 75 aa9.42□□□□□ -0.9
CDK5RAP3-219ENST00000580670 LINC00269Q8N2A0 174 aa9.42□□□□□ -0.9
CDK5RAP3-219ENST00000580670 UPK3BQ9BT76 320 aa9.41□□□□□ -0.9
CDK5RAP3-219ENST00000580670 A0A1B0GV72 72 aa9.4□□□□□ -0.9
CDK5RAP3-219ENST00000580670 C11orf86A6NJI1 115 aa9.4□□□□□ -0.9
CDK5RAP3-219ENST00000580670 LINC01556Q5JQF7 62 aa9.4□□□□□ -0.9
CDK5RAP3-219ENST00000580670 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
CDK5RAP3-219ENST00000580670 DNAH10OSP0CZ25 163 aa9.4□□□□□ -0.91
CDK5RAP3-219ENST00000580670 FOXI1Q12951 378 aa9.4□□□□□ -0.91
CDK5RAP3-219ENST00000580670 NFE4Q86UQ8 179 aa9.4□□□□□ -0.91
CDK5RAP3-219ENST00000580670 PGPEP1Q9NXJ5 209 aa9.4□□□□□ -0.91
CDK5RAP3-219ENST00000580670 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
CDK5RAP3-219ENST00000580670 SMCPP49901 116 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-219ENST00000580670 REG3AQ06141 175 aa9.39□□□□□ -0.91
CDK5RAP3-219ENST00000580670 LINC00959A0A1B0GUT2 108 aa9.38□□□□□ -0.91
CDK5RAP3-219ENST00000580670 TINCRA0A1B0GVN0 87 aa9.38□□□□□ -0.91
CDK5RAP3-219ENST00000580670 APOMO95445 188 aa9.38□□□□□ -0.91
CDK5RAP3-219ENST00000580670 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
CDK5RAP3-219ENST00000580670 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
CDK5RAP3-219ENST00000580670 GEMIN7Q9H840 131 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-219ENST00000580670 FAM19A3Q7Z5A8 133 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 PLEKHB2Q96CS7 222 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 Q9H8V8 135 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 STARD9Q9P2P6 4700 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 TENM2Q9NT68 2774 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 TSPAN13O95857 204 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 HERVK_113P61574 105 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 COX6A2Q02221 97 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 SS18Q15532 418 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 TMEM170BQ5T4T1 132 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
CDK5RAP3-219ENST00000580670 TRBV20-1A0A075B6N2 111 aa9.36□□□□□ -0.91
CDK5RAP3-219ENST00000580670 CRPP02741 224 aa9.36□□□□□ -0.91
CDK5RAP3-219ENST00000580670 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-219ENST00000580670 HERVK_113P63121 156 aa9.36□□□□□ -0.91
CDK5RAP3-219ENST00000580670 ENHOQ6UWT2 76 aa9.36□□□□□ -0.91
CDK5RAP3-219ENST00000580670 UBE2WQ96B02 151 aa9.36□□□□□ -0.91
CDK5RAP3-219ENST00000580670 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.912e-12■■□□□ 12.4
CDK5RAP3-219ENST00000580670 SCGB1D4Q6XE38 83 aa9.35□□□□□ -0.91
CDK5RAP3-219ENST00000580670 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
CDK5RAP3-219ENST00000580670 PLECQ15149 4684 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-219ENST00000580670 IGLV10-54A0A075B6I4 117 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms