RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ARPC5O15511 151 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 MGPP08493 103 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 CXCL1P09341 107 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 OR5AL1P0C617 328 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 CD164Q04900 197 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 KRTAP13-2Q52LG2 175 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 SPANXN1Q5VSR9 72 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 LINC00173Q6ZV60 143 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 CCDC32Q9BV29 185 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 SPANXA1Q9NS26 97 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 ZFP30Q9Y2G7 519 aa4.39□□□□□ -1.71
SMARCE1-217ENST00000580654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 IGKV2-29A2NJV5 120 aaPredicted RBP4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 ZNF861PO60384 105 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 MPC2O95563 127 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 CXorf1O96002 111 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 LTAP01374 205 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 RASL11AQ6T310 242 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 Q6ZNX1 250 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 FAM19A5Q7Z5A7 132 aaPredicted RBP4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 TSKUQ8WUA8 353 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 SMIM12Q96EX1 92 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 AP1S3Q96PC3 154 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 TMEM167BQ9NRX6 74 aa4.38□□□□□ -1.71
SMARCE1-217ENST00000580654 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 TINCRA0A1B0GVN0 87 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 INMT-MINDY4F8WBC2 141 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 BCL2L11O43521 198 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 H2BFSP57053 126 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 RIGQ13278 110 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 AMMECR1LQ6DCA0 310 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 EIF5AL1Q6IS14 154 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 FAM19A1Q7Z5A9 133 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 BTF3L4Q96K17 158 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 NIT2Q9NQR4 276 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 ANAPC11Q9NYG5 84 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 USH2AO75445 5202 aa4.37□□□□□ -1.71
SMARCE1-217ENST00000580654 TSHBP01222 138 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 NTF3P20783 257 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 S100PP25815 95 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 RPL32P62910 135 aaKnown RBP4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 KRTAP13-3Q3SY46 172 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 HIST1H2BAQ96A08 127 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 FMC1Q96HJ9 113 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 C2orf48Q96LS8 159 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 MAP1LC3AQ9H492 121 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 BIN3Q9NQY0 253 aa4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
SMARCE1-217ENST00000580654 C19orf71A6NCJ1 209 aa4.35□□□□□ -1.71
SMARCE1-217ENST00000580654 LINC00587B1AMM8 73 aa4.35□□□□□ -1.71
SMARCE1-217ENST00000580654 PFDN1O60925 122 aa4.35□□□□□ -1.71
SMARCE1-217ENST00000580654 ESDP10768 282 aa4.35□□□□□ -1.71
SMARCE1-217ENST00000580654 ATP6V0CP27449 155 aa4.35□□□□□ -1.71
SMARCE1-217ENST00000580654 UBE2BP63146 152 aa4.35□□□□□ -1.71
SMARCE1-217ENST00000580654 Q6ZVQ6 151 aa4.35□□□□□ -1.71
SMARCE1-217ENST00000580654 LINC00304Q8N9R0 145 aa4.35□□□□□ -1.71
SMARCE1-217ENST00000580654 H7C423 109 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 IFNA1P01562 189 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 UBE2G1P62253 170 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 SERF2P84101 59 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 SS18Q15532 418 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 ZNF726P1Q15940 193 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 PAPPA-AS1Q5QFB9 102 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 C2orf88Q9BSF0 95 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 PSMG3Q9BT73 122 aaPredicted RBP4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 TNFSF18Q9UNG2 199 aa4.34□□□□□ -1.71
SMARCE1-217ENST00000580654 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 ZNF25P17030 456 aaPredicted RBP4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 RAB5AP20339 215 aa4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 LINC00242Q5T6M2 205 aa4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 STOML3Q8TAV4 291 aa4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 S100ZQ8WXG8 99 aa4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 NKX6-2Q9C056 277 aaPredicted RBP4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 ALG5Q9Y673 324 aa4.33□□□□□ -1.72
SMARCE1-217ENST00000580654 G3V3Q6 166 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 COX7A2LO14548 114 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 NCR2O95944 276 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 APCSP02743 223 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 GIPP09681 153 aaPredicted RBP4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 IGLC6P0CF74 106 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 SPAG11BQ08648 103 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 LINC00337Q8N6G1 96 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 MRAP2Q96G30 205 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 CDC42SE2Q9NRR3 84 aa4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 MRPL35Q9NZE8 188 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-217ENST00000580654 CTXND1A0A1B0GTU2 59 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 UPK1BO75841 260 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 AKR1C3P42330 323 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 C5orf38Q86SI9 138 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 GATD1Q8NB37 220 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 RPL39LQ96EH5 51 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 C12orf57Q99622 126 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 SIGMAR1Q99720 223 aa4.31□□□□□ -1.72
SMARCE1-217ENST00000580654 MARVELD1Q9BSK0 173 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms