RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 TTC32Q5I0X7 151 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 AMMECR1LQ6DCA0 310 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 ENHOQ6UWT2 76 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 FAM19A3Q7Z5A8 133 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 ZNF664Q8N3J9 261 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 Q8N976 141 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 OR5A1Q8NGJ0 315 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 SCGB3A1Q96QR1 104 aa4.79□□□□□ -1.64
RNF43-204ENST00000580014 IGLV5-52A0A0A0MRZ9 124 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 CCL25O15444 150 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 ATP5LO75964 103 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 IGHV3-30P01768 117 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 IGHV3-33P01772 117 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 IGHV3-30-3P0DP02 117 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 IGHV3-30-5P0DP03 117 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 GAGE2BQ13066 116 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 PMCHL1Q16048 86 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 Q6ZUT4 128 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 LINC00173Q6ZV60 143 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 HIST3H2BBQ8N257 126 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 FAM19A2Q8N3H0 131 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 TMEM101Q96IK0 257 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 OPRPNQ99935 248 aaPredicted RBP4.78□□□□□ -1.64
RNF43-204ENST00000580014 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
RNF43-204ENST00000580014 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.77□□□□□ -1.65
RNF43-204ENST00000580014 LY6G6CO95867 125 aa4.77□□□□□ -1.65
RNF43-204ENST00000580014 ANGP03950 147 aaKnown RBP4.77□□□□□ -1.65
RNF43-204ENST00000580014 SNRPEP62304 92 aaKnown RBP4.77□□□□□ -1.65
RNF43-204ENST00000580014 REG3AQ06141 175 aa4.77□□□□□ -1.65
RNF43-204ENST00000580014 UBE2V1Q13404 147 aa4.77□□□□□ -1.65
RNF43-204ENST00000580014 MIAQ16674 131 aa4.77□□□□□ -1.65
RNF43-204ENST00000580014 LINC00269Q8N2A0 174 aa4.77□□□□□ -1.65
RNF43-204ENST00000580014 KLK12Q9UKR0 248 aa4.77□□□□□ -1.65
RNF43-204ENST00000580014 PLECQ15149 4684 aaKnown RBP4.77□□□□□ -1.65
RNF43-204ENST00000580014 DNAH6Q9C0G6 4158 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 TRAV8-3A0A0A6YYJ7 113 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 TRAV12-1A0A0B4J245 112 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 TRAV8-4A0A0B4J246 113 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 LINC00959A0A1B0GUT2 108 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 IFITM10A6NMD0 228 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 LEPROTL1O95214 131 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 Q6ZRN7 208 aaPredicted RBP4.76□□□□□ -1.65
RNF43-204ENST00000580014 SPATA12Q7Z6I5 190 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 BAALCQ8WXS3 180 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 IFI27L1Q96BM0 104 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 CST9LQ9H4G1 147 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 HSPB8Q9UJY1 196 aa4.76□□□□□ -1.65
RNF43-204ENST00000580014 S100A6P06703 90 aa4.75□□□□□ -1.65
RNF43-204ENST00000580014 PRSS2P07478 247 aa4.75□□□□□ -1.65
RNF43-204ENST00000580014 UBE2D1P51668 147 aa4.75□□□□□ -1.65
RNF43-204ENST00000580014 PMVKQ15126 192 aa4.75□□□□□ -1.65
RNF43-204ENST00000580014 TEX43Q6ZNM6 134 aa4.75□□□□□ -1.65
RNF43-204ENST00000580014 Q75L30 129 aa4.75□□□□□ -1.65
RNF43-204ENST00000580014 HIST1H2BLQ99880 126 aa4.75□□□□□ -1.65
RNF43-204ENST00000580014 VCX2Q9H322 139 aa4.75□□□□□ -1.65
RNF43-204ENST00000580014 IGLV5-37A0A075B6J1 123 aa4.74□□□□□ -1.65
RNF43-204ENST00000580014 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
RNF43-204ENST00000580014 RNASE13Q5GAN3 156 aaKnown RBP4.74□□□□□ -1.65
RNF43-204ENST00000580014 LINC00242Q5T6M2 205 aa4.74□□□□□ -1.65
RNF43-204ENST00000580014 ZC2HC1BQ5TFG8 222 aa4.74□□□□□ -1.65
RNF43-204ENST00000580014 Q6ZN92 141 aa4.74□□□□□ -1.65
RNF43-204ENST00000580014 NFE4Q86UQ8 179 aa4.74□□□□□ -1.65
RNF43-204ENST00000580014 UBE2WQ96B02 151 aa4.74□□□□□ -1.65
RNF43-204ENST00000580014 IGLV4-69A0A075B6H9 119 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 IGHV3OR16-9A0A0B4J2B5 98 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 TINCRA0A1B0GVN0 87 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 SYS1-DBNDD2H3BUS1 97 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 CRPP02741 224 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 IGLC3P0DOY3 106 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 FABP4P15090 132 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 SEC11AP67812 179 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 SS18Q15532 418 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 CD164L2Q6UWJ8 174 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 PET117Q6UWS5 81 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 LINC01561Q8N1V8 128 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 C6orf223Q8N319 242 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 MAPKAPK5-AS1Q8N8E1 139 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 CHCHD10Q8WYQ3 142 aaPredicted RBP4.73□□□□□ -1.65
RNF43-204ENST00000580014 RMI2Q96E14 147 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 C2orf88Q9BSF0 95 aa4.73□□□□□ -1.65
RNF43-204ENST00000580014 TRAV13-1A0A0B4J241 112 aa4.72□□□□□ -1.65
RNF43-204ENST00000580014 A0A0J9YXV3 536 aa4.72□□□□□ -1.65
RNF43-204ENST00000580014 M0R2N4 97 aa4.72□□□□□ -1.65
RNF43-204ENST00000580014 PRSS1P07477 247 aa4.72□□□□□ -1.65
RNF43-204ENST00000580014 C3orf79P0CE67 100 aa4.72□□□□□ -1.65
RNF43-204ENST00000580014 C1orf134Q5TEV5 83 aa4.72□□□□□ -1.65
RNF43-204ENST00000580014 LINC01545Q5VT33 79 aa4.72□□□□□ -1.65
RNF43-204ENST00000580014 MAP1LC3CQ9BXW4 147 aa4.72□□□□□ -1.65
RNF43-204ENST00000580014 A0A087WZ39 114 aa4.71□□□□□ -1.66
RNF43-204ENST00000580014 F8VRH5 84 aa4.71□□□□□ -1.66
RNF43-204ENST00000580014 RTL8CO15255 209 aa4.71□□□□□ -1.66
RNF43-204ENST00000580014 S100A2P29034 98 aa4.71□□□□□ -1.66
RNF43-204ENST00000580014 HERVK_113P63121 156 aa4.71□□□□□ -1.66
RNF43-204ENST00000580014 COX6A2Q02221 97 aa4.71□□□□□ -1.66
RNF43-204ENST00000580014 CLPSL2Q6UWE3 100 aa4.71□□□□□ -1.66
RNF43-204ENST00000580014 Q9HAA7 133 aa4.71□□□□□ -1.66
RNF43-204ENST00000580014 MRPL35Q9NZE8 188 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms