RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 Q6ZN92 141 aa3.43□□□□□ -1.86
PTPRM-207ENST00000578571 CHCHD1Q96BP2 118 aaKnown RBP3.43□□□□□ -1.86
PTPRM-207ENST00000578571 UPK3BQ9BT76 320 aa3.43□□□□□ -1.86
PTPRM-207ENST00000578571 CYSLTR1Q9Y271 337 aa3.43□□□□□ -1.86
PTPRM-207ENST00000578571 HUWE1Q7Z6Z7 4374 aaKnown RBP3.42□□□□□ -1.86
PTPRM-207ENST00000578571 NBEAL2Q6ZNJ1 2754 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 NACAE9PAV3 2078 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 DNAH9Q9NYC9 4486 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 LY6G6CO95867 125 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 HBDP02042 147 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 LINC00694P0DN24 101 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 Q0VG73 95 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 RNASEKQ6P5S7 137 aaKnown RBP3.42□□□□□ -1.86
PTPRM-207ENST00000578571 OR5A1Q8NGJ0 315 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 C18orf32Q8TCD1 76 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 RMI2Q96E14 147 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 C2orf88Q9BSF0 95 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 SPANXA1Q9NS26 97 aa3.42□□□□□ -1.86
PTPRM-207ENST00000578571 PRKDCP78527 4128 aaKnown RBP3.41□□□□□ -1.86
PTPRM-207ENST00000578571 CCL25O15444 150 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 ATP5LO75964 103 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 S100A2P29034 98 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 ESRGQ1W209 222 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 LINC01556Q5JQF7 62 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 CD164L2Q6UWJ8 174 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 C20orf203Q8NBC4 194 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 TIMM21Q9BVV7 248 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 CSDC2Q9Y534 153 aaKnown RBP3.41□□□□□ -1.86
PTPRM-207ENST00000578571 STAB2Q8WWQ8 2551 aa3.41□□□□□ -1.86
PTPRM-207ENST00000578571 TRAV8-3A0A0A6YYJ7 113 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BKO60814 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 ANGP03950 147 aaKnown RBP3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BJP06899 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 DNAH10OSP0CZ25 163 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 FGF6P10767 208 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BOP23527 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BBP33778 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 AKR1D1P51857 326 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BDP58876 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BCP62807 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 SEC11AP67812 179 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST2H2BEQ16778 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.4□□□□□ -1.87
PTPRM-207ENST00000578571 C2orf66Q6UXQ4 117 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 ERASQ7Z444 233 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 MRPL52Q86TS9 123 aaKnown RBP3.4□□□□□ -1.87
PTPRM-207ENST00000578571 NIT1Q86X76 327 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BHQ93079 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 TMEM141Q96I45 108 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 PACRGQ96M98 296 aaPredicted RBP3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BNQ99877 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HIST1H2BMQ99879 126 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 DHRS4-AS1Q9P1J3 65 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 HSPB8Q9UJY1 196 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 LINC00588Q9Y4M8 146 aa3.4□□□□□ -1.87
PTPRM-207ENST00000578571 TENM3Q9P273 2699 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 IGLV2-18A0A075B6J9 118 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.39□□□□□ -1.87
PTPRM-207ENST00000578571 TRAV8-4A0A0B4J246 113 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 IGKV2-29A2NJV5 120 aaPredicted RBP3.39□□□□□ -1.87
PTPRM-207ENST00000578571 LINC01546A6NGU7 62 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 LEPROTL1O95214 131 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 KRTAP1-4P0C5Y4 121 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 ESDP10768 282 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 NDUFA6P56556 154 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 SS18Q15532 418 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 MIAQ16674 131 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 TEX43Q6ZNM6 134 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 NTM-AS1Q6ZSK4 140 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 WFDC10BQ8IUB3 73 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 TOMM6Q96B49 74 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 SCGB3A1Q96QR1 104 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 TIMM17AQ99595 171 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 VCX2Q9H322 139 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 Q9UF83 564 aa3.39□□□□□ -1.87
PTPRM-207ENST00000578571 NBDYA0A0U1RRE5 68 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 C20orf202A1L168 122 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 PSCAO43653 123 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 SERF1AO75920 110 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 IGHV3-30P01768 117 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 IGHV3-33P01772 117 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 IGHV3-30-3P0DP02 117 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 IGHV3-30-5P0DP03 117 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 RBX1P62877 108 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
PTPRM-207ENST00000578571 Q1RN00 199 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 MPV17L2Q567V2 206 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 COA6Q5JTJ3 125 aaKnown RBP3.38□□□□□ -1.87
PTPRM-207ENST00000578571 LINC00242Q5T6M2 205 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 ZNF664Q8N3J9 261 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 UBE2WQ96B02 151 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 MAP1LC3CQ9BXW4 147 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 KLK12Q9UKR0 248 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 UBE2D4Q9Y2X8 147 aa3.38□□□□□ -1.87
PTPRM-207ENST00000578571 LCE6AA0A183 80 aa3.37□□□□□ -1.87
PTPRM-207ENST00000578571 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
PTPRM-207ENST00000578571 RPL39P62891 51 aaKnown RBP3.37□□□□□ -1.87
PTPRM-207ENST00000578571 REG3AQ06141 175 aa3.37□□□□□ -1.87
PTPRM-207ENST00000578571 Q8N976 141 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms