RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 TMEM238C9JI98 176 aa19.21■□□□□ 0.67
LIMD2-203ENST00000578067 TMEM262E9PQX1 116 aa19.21■□□□□ 0.67
LIMD2-203ENST00000578067 A0A1B0GUV1 79 aa19.2■□□□□ 0.66
LIMD2-203ENST00000578067 MAST4O15021 2626 aa19.2■□□□□ 0.66
LIMD2-203ENST00000578067 IGKV3OR2-268A0A0C4DH90 116 aa19.18■□□□□ 0.66
LIMD2-203ENST00000578067 MRPL23Q16540 153 aaKnown RBP19.18■□□□□ 0.66
LIMD2-203ENST00000578067 A0A1W2PPM0 123 aa19.18■□□□□ 0.66
LIMD2-203ENST00000578067 RBX1P62877 108 aa19.18■□□□□ 0.66
LIMD2-203ENST00000578067 NDUFA1O15239 70 aa19.17■□□□□ 0.66
LIMD2-203ENST00000578067 CMYA5Q8N3K9 4069 aa19.16■□□□□ 0.66
LIMD2-203ENST00000578067 LITAFQ99732 161 aa19.16■□□□□ 0.66
LIMD2-203ENST00000578067 ICOSQ9Y6W8 199 aa19.16■□□□□ 0.66
LIMD2-203ENST00000578067 IGLL5B9A064 214 aa19.15■□□□□ 0.66
LIMD2-203ENST00000578067 SH2D6Q7Z4S9 175 aa19.15■□□□□ 0.66
LIMD2-203ENST00000578067 C11orf68Q9H3H3 251 aaKnown RBP19.15■□□□□ 0.66
LIMD2-203ENST00000578067 PKD1L1Q8TDX9 2849 aa19.14■□□□□ 0.66
LIMD2-203ENST00000578067 GAGE10A6NGK3 116 aa19.13■□□□□ 0.65
LIMD2-203ENST00000578067 FABP2P12104 132 aa19.13■□□□□ 0.65
LIMD2-203ENST00000578067 LINC00959A0A1B0GUT2 108 aa19.12■□□□□ 0.65
LIMD2-203ENST00000578067 MUSTN1Q8IVN3 82 aa19.12■□□□□ 0.65
LIMD2-203ENST00000578067 GTF2H5Q6ZYL4 71 aa19.12■□□□□ 0.65
LIMD2-203ENST00000578067 SPANXDQ9BXN6 97 aa19.11■□□□□ 0.65
LIMD2-203ENST00000578067 SPANXCQ9NY87 97 aa19.11■□□□□ 0.65
LIMD2-203ENST00000578067 TIMM17BO60830 172 aa19.1■□□□□ 0.65
LIMD2-203ENST00000578067 RPL24P83731 157 aaKnown RBP19.1■□□□□ 0.65
LIMD2-203ENST00000578067 Q9H8V8 135 aa19.1■□□□□ 0.65
LIMD2-203ENST00000578067 COL6A5A8TX70 2615 aa19.1■□□□□ 0.65
LIMD2-203ENST00000578067 IGHV3OR16-9A0A0B4J2B5 98 aa19.1■□□□□ 0.65
LIMD2-203ENST00000578067 K7EP34 96 aa19.1■□□□□ 0.65
LIMD2-203ENST00000578067 APOMO95445 188 aa19.1■□□□□ 0.65
LIMD2-203ENST00000578067 ADAMTSL4-AS1Q5T5F5 129 aa19.1■□□□□ 0.65
LIMD2-203ENST00000578067 CFC1BP0CG36 223 aa19.08■□□□□ 0.65
LIMD2-203ENST00000578067 CFC1P0CG37 223 aa19.08■□□□□ 0.65
LIMD2-203ENST00000578067 SPCS1Q9Y6A9 102 aa19.08■□□□□ 0.64
LIMD2-203ENST00000578067 A4D1N5 150 aa19.07■□□□□ 0.64
LIMD2-203ENST00000578067 SS18Q15532 418 aa19.07■□□□□ 0.64
LIMD2-203ENST00000578067 LELP1Q5T871 98 aa19.07■□□□□ 0.64
LIMD2-203ENST00000578067 MIAQ16674 131 aa19.07■□□□□ 0.64
LIMD2-203ENST00000578067 PRSS2P07478 247 aa19.06■□□□□ 0.64
LIMD2-203ENST00000578067 ZNF625Q96I27 306 aaPredicted RBP19.06■□□□□ 0.64
LIMD2-203ENST00000578067 PGPEP1Q9NXJ5 209 aa19.06■□□□□ 0.64
LIMD2-203ENST00000578067 A0A087WZ39 114 aa19.05■□□□□ 0.64
LIMD2-203ENST00000578067 A0A0J9YWU9 116 aa19.05■□□□□ 0.64
LIMD2-203ENST00000578067 CIRBPQ14011 172 aaKnown RBP19.05■□□□□ 0.64
LIMD2-203ENST00000578067 H3BNG1 76 aa19.04■□□□□ 0.64
LIMD2-203ENST00000578067 Q6ZTC4 211 aa19.04■□□□□ 0.64
LIMD2-203ENST00000578067 CLPSL2Q6UWE3 100 aa19.03■□□□□ 0.64
LIMD2-203ENST00000578067 COX7B2Q8TF08 81 aa19.03■□□□□ 0.64
LIMD2-203ENST00000578067 DNAH3Q8TD57 4116 aa19.02■□□□□ 0.64
LIMD2-203ENST00000578067 PRB2P02812 416 aaPredicted RBP19.02■□□□□ 0.64
LIMD2-203ENST00000578067 HERV-K104P63124 156 aa19.02■□□□□ 0.64
LIMD2-203ENST00000578067 LINC00269Q8N2A0 174 aa19.02■□□□□ 0.64
LIMD2-203ENST00000578067 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.01■□□□□ 0.63
LIMD2-203ENST00000578067 C5orf38Q86SI9 138 aa19.01■□□□□ 0.63
LIMD2-203ENST00000578067 ANGP03950 147 aaKnown RBP19■□□□□ 0.63
LIMD2-203ENST00000578067 XCL1P47992 114 aa19■□□□□ 0.63
LIMD2-203ENST00000578067 LYPD5Q6UWN5 251 aa19■□□□□ 0.63
LIMD2-203ENST00000578067 Q8N3U1 123 aa19■□□□□ 0.63
LIMD2-203ENST00000578067 PRO1854Q9UHT4 67 aa19■□□□□ 0.63
LIMD2-203ENST00000578067 TSPAN13O95857 204 aa19■□□□□ 0.63
LIMD2-203ENST00000578067 A0A0B4J2C4 111 aa18.99■□□□□ 0.63
LIMD2-203ENST00000578067 IFITM1P13164 125 aa18.99■□□□□ 0.63
LIMD2-203ENST00000578067 KPRPQ5T749 579 aaPredicted RBP18.98■□□□□ 0.63
LIMD2-203ENST00000578067 TOMM7Q9P0U1 55 aa18.98■□□□□ 0.63
LIMD2-203ENST00000578067 K7EIL1 84 aa18.97■□□□□ 0.63
LIMD2-203ENST00000578067 EIF4EBP3O60516 100 aaPredicted RBP18.97■□□□□ 0.63
LIMD2-203ENST00000578067 REG3AQ06141 175 aa18.97■□□□□ 0.63
LIMD2-203ENST00000578067 C11orf45Q8TAV5 145 aa18.97■□□□□ 0.63
LIMD2-203ENST00000578067 NANOS2P60321 138 aaKnown RBP18.96■□□□□ 0.63
LIMD2-203ENST00000578067 NPC2P61916 151 aa18.96■□□□□ 0.63
LIMD2-203ENST00000578067 MEIG1Q5JSS6 88 aa18.96■□□□□ 0.63
LIMD2-203ENST00000578067 DAND5Q8N907 189 aa18.96■□□□□ 0.63
LIMD2-203ENST00000578067 SPATA25Q9BR10 227 aa18.96■□□□□ 0.63
LIMD2-203ENST00000578067 LINC01561Q8N1V8 128 aa18.94■□□□□ 0.62
LIMD2-203ENST00000578067 DEFB121Q5J5C9 76 aa18.93■□□□□ 0.62
LIMD2-203ENST00000578067 TM2D3Q9BRN9 247 aa18.93■□□□□ 0.62
LIMD2-203ENST00000578067 A0A0U1RRA0 63 aa18.92■□□□□ 0.62
LIMD2-203ENST00000578067 CD164L2Q6UWJ8 174 aa18.92■□□□□ 0.62
LIMD2-203ENST00000578067 IGHV3-33P01772 117 aa18.91■□□□□ 0.62
LIMD2-203ENST00000578067 CHCHD10Q8WYQ3 142 aaPredicted RBP18.91■□□□□ 0.62
LIMD2-203ENST00000578067 MDFIQ99750 246 aa18.91■□□□□ 0.62
LIMD2-203ENST00000578067 ANK2Q01484 3957 aa18.91■□□□□ 0.62
LIMD2-203ENST00000578067 DEFB131BA0A096LNP1 70 aa18.91■□□□□ 0.62
LIMD2-203ENST00000578067 LINC00308Q8TCZ7 52 aa18.91■□□□□ 0.62
LIMD2-203ENST00000578067 COPS9Q8WXC6 57 aa18.89■□□□□ 0.61
LIMD2-203ENST00000578067 ERG28Q9UKR5 140 aa18.89■□□□□ 0.61
LIMD2-203ENST00000578067 LOC107984156A0A0G2JMH3 177 aa18.88■□□□□ 0.61
LIMD2-203ENST00000578067 ARL17AQ8IVW1 177 aa18.88■□□□□ 0.61
LIMD2-203ENST00000578067 IGLV10-54A0A075B6I4 117 aa18.88■□□□□ 0.61
LIMD2-203ENST00000578067 SFTA2Q6UW10 78 aa18.88■□□□□ 0.61
LIMD2-203ENST00000578067 MRAPQ8TCY5 172 aa18.88■□□□□ 0.61
LIMD2-203ENST00000578067 NOTCH1P46531 2555 aa18.87■□□□□ 0.61
LIMD2-203ENST00000578067 COX7A2LO14548 114 aa18.86■□□□□ 0.61
LIMD2-203ENST00000578067 C6orf226Q5I0X4 101 aa18.86■□□□□ 0.61
LIMD2-203ENST00000578067 PRR34Q9NV39 138 aa18.86■□□□□ 0.61
LIMD2-203ENST00000578067 LYRM7Q5U5X0 104 aa18.86■□□□□ 0.61
LIMD2-203ENST00000578067 KLK12Q9UKR0 248 aa18.86■□□□□ 0.61
LIMD2-203ENST00000578067 Q8IZM0 81 aa18.85■□□□□ 0.61
LIMD2-203ENST00000578067 TENM3Q9P273 2699 aa18.84■□□□□ 0.61
LIMD2-203ENST00000578067 H3BMG7 143 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms