RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 Q8NAQ8 132 aa9.75□□□□□ -0.85
SREBF1-217ENST00000577897 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
SREBF1-217ENST00000577897 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
SREBF1-217ENST00000577897 APOBP04114 4563 aaKnown RBP9.75□□□□□ -0.85
SREBF1-217ENST00000577897 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
SREBF1-217ENST00000577897 GYPEP15421 78 aa9.74□□□□□ -0.85
SREBF1-217ENST00000577897 LRP1BQ9NZR2 4599 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 TRBV6-8A0A0A6YYG3 113 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 A6NDN8 102 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 EREGO14944 169 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 LGALS3P17931 250 aaKnown RBP9.73□□□□□ -0.85
SREBF1-217ENST00000577897 HINT1P49773 126 aaPredicted RBP9.73□□□□□ -0.85
SREBF1-217ENST00000577897 HERVK_113P63121 156 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 TAL2Q16559 108 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 PCP2Q8IVA1 136 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 UBE2DNLQ8IWF7 75 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 Q9UF83 564 aa9.73□□□□□ -0.85
SREBF1-217ENST00000577897 TRAV26-1A0A087WT03 109 aa9.72□□□□□ -0.85
SREBF1-217ENST00000577897 LEPROTO15243 131 aa9.72□□□□□ -0.85
SREBF1-217ENST00000577897 TIRAPP58753 221 aa9.72□□□□□ -0.85
SREBF1-217ENST00000577897 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
SREBF1-217ENST00000577897 CHCHD5Q9BSY4 110 aa9.72□□□□□ -0.85
SREBF1-217ENST00000577897 LINC00694P0DN24 101 aa9.71□□□□□ -0.86
SREBF1-217ENST00000577897 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.86
SREBF1-217ENST00000577897 MPV17L2Q567V2 206 aa9.71□□□□□ -0.86
SREBF1-217ENST00000577897 SCGB1D4Q6XE38 83 aa9.71□□□□□ -0.86
SREBF1-217ENST00000577897 DEFB131BA0A096LNP1 70 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 IGKV2D-26A0A0A0MRZ7 120 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 A0A0J9YXV3 536 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 TMEM223A0PJW6 202 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 ZNF815PA8K554 130 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 F5H768 121 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 C1orf134Q5TEV5 83 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 Q6ZR54 194 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 Q6ZUT4 128 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
SREBF1-217ENST00000577897 LOC100131303A0A0U1RQF7 123 aa9.69□□□□□ -0.86
SREBF1-217ENST00000577897 ZNF22P17026 224 aaPredicted RBP9.69□□□□□ -0.86
SREBF1-217ENST00000577897 BVES-AS1Q5T3Y7 98 aa9.69□□□□□ -0.86
SREBF1-217ENST00000577897 NTM-AS1Q6ZSK4 140 aa9.69□□□□□ -0.86
SREBF1-217ENST00000577897 ORAOV1Q8WV07 137 aa9.69□□□□□ -0.86
SREBF1-217ENST00000577897 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
SREBF1-217ENST00000577897 J3QQQ9 107 aa9.68□□□□□ -0.86
SREBF1-217ENST00000577897 UBE2D1P51668 147 aa9.68□□□□□ -0.86
SREBF1-217ENST00000577897 TNP2Q05952 138 aa9.68□□□□□ -0.86
SREBF1-217ENST00000577897 FAM19A3Q7Z5A8 133 aa9.68□□□□□ -0.86
SREBF1-217ENST00000577897 LINC00469Q8N7U9 141 aa9.68□□□□□ -0.86
SREBF1-217ENST00000577897 CDC42SE2Q9NRR3 84 aa9.68□□□□□ -0.86
SREBF1-217ENST00000577897 TMEM238LA0A1B0GVL6 79 aa9.67□□□□□ -0.86
SREBF1-217ENST00000577897 A6NJY4 79 aa9.67□□□□□ -0.86
SREBF1-217ENST00000577897 CCL25O15444 150 aa9.67□□□□□ -0.86
SREBF1-217ENST00000577897 HIST1H4GQ99525 98 aa9.67□□□□□ -0.86
SREBF1-217ENST00000577897 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
SREBF1-217ENST00000577897 TMEM262E9PQX1 116 aa9.66□□□□□ -0.86
SREBF1-217ENST00000577897 H3BNG1 76 aa9.66□□□□□ -0.86
SREBF1-217ENST00000577897 PTTG1IPP53801 180 aa9.66□□□□□ -0.86
SREBF1-217ENST00000577897 GAGE6Q13070 117 aa9.66□□□□□ -0.86
SREBF1-217ENST00000577897 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
SREBF1-217ENST00000577897 MYCBP2O75592 4640 aa9.65□□□□□ -0.86
SREBF1-217ENST00000577897 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
SREBF1-217ENST00000577897 INAFM2P0DMQ5 153 aa9.65□□□□□ -0.86
SREBF1-217ENST00000577897 HTN3P15516 51 aa9.65□□□□□ -0.86
SREBF1-217ENST00000577897 SRSF9Q13242 221 aaKnown RBP eCLIP9.65□□□□□ -0.86
SREBF1-217ENST00000577897 IGLV5-45A0A087WSX0 123 aa9.64□□□□□ -0.87
SREBF1-217ENST00000577897 A0A0J9YY99 117 aa9.64□□□□□ -0.87
SREBF1-217ENST00000577897 EPM2AB3EWF7 344 aa9.64□□□□□ -0.87
SREBF1-217ENST00000577897 GCSHP23434 173 aa9.64□□□□□ -0.87
SREBF1-217ENST00000577897 C12orf74Q32Q52 190 aa9.64□□□□□ -0.87
SREBF1-217ENST00000577897 RNASE13Q5GAN3 156 aaKnown RBP9.64□□□□□ -0.87
SREBF1-217ENST00000577897 CEND1Q8N111 149 aa9.64□□□□□ -0.87
SREBF1-217ENST00000577897 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
SREBF1-217ENST00000577897 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
SREBF1-217ENST00000577897 TMEM238C9JI98 176 aa9.63□□□□□ -0.87
SREBF1-217ENST00000577897 SS18Q15532 418 aa9.63□□□□□ -0.87
SREBF1-217ENST00000577897 DNAH5Q8TE73 4624 aa9.62□□□□□ -0.87
SREBF1-217ENST00000577897 A0A1B0GV90 55 aa9.62□□□□□ -0.87
SREBF1-217ENST00000577897 SMIM13P0DJ93 91 aa9.62□□□□□ -0.87
SREBF1-217ENST00000577897 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
SREBF1-217ENST00000577897 CIRBPQ14011 172 aaKnown RBP9.62□□□□□ -0.87
SREBF1-217ENST00000577897 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
SREBF1-217ENST00000577897 TM2D2Q9BX73 214 aa9.62□□□□□ -0.87
SREBF1-217ENST00000577897 SPANXB1Q9NS25 103 aaPredicted RBP9.62□□□□□ -0.87
SREBF1-217ENST00000577897 LINC00242Q5T6M2 205 aa9.61□□□□□ -0.87
SREBF1-217ENST00000577897 LELP1Q5T871 98 aa9.61□□□□□ -0.87
SREBF1-217ENST00000577897 COPS9Q8WXC6 57 aa9.61□□□□□ -0.87
SREBF1-217ENST00000577897 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
SREBF1-217ENST00000577897 TP73-AS1Q9UF72 201 aa9.61□□□□□ -0.87
SREBF1-217ENST00000577897 FLG2Q5D862 2391 aaPredicted RBP9.61□□□□□ -0.87
SREBF1-217ENST00000577897 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
SREBF1-217ENST00000577897 SPINK8P0C7L1 97 aa9.59□□□□□ -0.87
SREBF1-217ENST00000577897 Q6ZVH6 145 aa9.59□□□□□ -0.87
SREBF1-217ENST00000577897 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
SREBF1-217ENST00000577897 NDUFA12Q9UI09 145 aa9.59□□□□□ -0.87
SREBF1-217ENST00000577897 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
SREBF1-217ENST00000577897 IGHV3-64A0A075B6Q5 118 aa9.58□□□□□ -0.88
SREBF1-217ENST00000577897 RBX1P62877 108 aa9.58□□□□□ -0.88
SREBF1-217ENST00000577897 A0A096LPF7 62 aa9.57□□□□□ -0.88
SREBF1-217ENST00000577897 HERV-K104P63124 156 aa9.57□□□□□ -0.88
SREBF1-217ENST00000577897 RPL24P83731 157 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms