RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 COX7CP15954 63 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 ZNF22P17026 224 aaPredicted RBP9.97□□□□□ -0.81
RNF43-202ENST00000577625 EDA2RQ9HAV5 297 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 ICOSQ9Y6W8 199 aa9.97□□□□□ -0.81
RNF43-202ENST00000577625 LEPROTO15243 131 aa9.96□□□□□ -0.82
RNF43-202ENST00000577625 PIK3CD-AS1Q5SR53 167 aa9.96□□□□□ -0.82
RNF43-202ENST00000577625 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
RNF43-202ENST00000577625 GAGE2AQ6NT46 116 aa9.96□□□□□ -0.82
RNF43-202ENST00000577625 LINC00643Q86TS7 51 aa9.96□□□□□ -0.82
RNF43-202ENST00000577625 KLK5Q9Y337 293 aaPredicted RBP9.96□□□□□ -0.82
RNF43-202ENST00000577625 F5H697 171 aa9.95□□□□□ -0.82
RNF43-202ENST00000577625 C11orf72Q8NBR9 251 aa9.95□□□□□ -0.82
RNF43-202ENST00000577625 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
RNF43-202ENST00000577625 TIMM17AQ99595 171 aa9.95□□□□□ -0.82
RNF43-202ENST00000577625 TP53TG1Q9Y2A0 90 aa9.95□□□□□ -0.82
RNF43-202ENST00000577625 SDHAF1A6NFY7 115 aa9.94□□□□□ -0.82
RNF43-202ENST00000577625 C1orf158Q8N1D5 194 aa9.94□□□□□ -0.82
RNF43-202ENST00000577625 LST1O00453 97 aa9.94□□□□□ -0.82
RNF43-202ENST00000577625 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
RNF43-202ENST00000577625 CXCL5P42830 114 aa9.94□□□□□ -0.82
RNF43-202ENST00000577625 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
RNF43-202ENST00000577625 M0QY20 66 aa9.93□□□□□ -0.82
RNF43-202ENST00000577625 POLR2KP53803 58 aaKnown RBP9.93□□□□□ -0.82
RNF43-202ENST00000577625 C9orf66Q5T8R8 295 aa9.92□□□□□ -0.82
RNF43-202ENST00000577625 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
RNF43-202ENST00000577625 C2orf48Q96LS8 159 aa9.91□□□□□ -0.82
RNF43-202ENST00000577625 STAB1Q9NY15 2570 aa9.91□□□□□ -0.82
RNF43-202ENST00000577625 TRRAPQ9Y4A5 3859 aa9.91□□□□□ -0.82
RNF43-202ENST00000577625 MAST4O15021 2626 aa9.91□□□□□ -0.82
RNF43-202ENST00000577625 IGHV3OR16-12A0A075B7B8 117 aa9.91□□□□□ -0.82
RNF43-202ENST00000577625 VCYO14598 125 aa9.91□□□□□ -0.82
RNF43-202ENST00000577625 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
RNF43-202ENST00000577625 TRBV27A0A0K0K1C4 114 aa9.9□□□□□ -0.82
RNF43-202ENST00000577625 KRTAP24-1Q3LI83 254 aa9.9□□□□□ -0.82
RNF43-202ENST00000577625 SDIM1Q6ZPB5 146 aa9.9□□□□□ -0.82
RNF43-202ENST00000577625 SMCR5Q8TEV8 140 aa9.9□□□□□ -0.82
RNF43-202ENST00000577625 TRACP01848 142 aa9.9□□□□□ -0.83
RNF43-202ENST00000577625 IL17DQ8TAD2 202 aa9.9□□□□□ -0.83
RNF43-202ENST00000577625 CLEC2BQ92478 149 aa9.9□□□□□ -0.83
RNF43-202ENST00000577625 A0A0J9YXY3 114 aa9.89□□□□□ -0.83
RNF43-202ENST00000577625 ATOX1O00244 68 aa9.89□□□□□ -0.83
RNF43-202ENST00000577625 TMEM258P61165 79 aa9.89□□□□□ -0.83
RNF43-202ENST00000577625 F5H768 121 aa9.88□□□□□ -0.83
RNF43-202ENST00000577625 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
RNF43-202ENST00000577625 CSNK1G2-AS1Q8NCQ2 148 aa9.88□□□□□ -0.83
RNF43-202ENST00000577625 HIST1H4AP62805 103 aaKnown RBP9.87□□□□□ -0.83
RNF43-202ENST00000577625 DPH3Q96FX2 82 aa9.87□□□□□ -0.83
RNF43-202ENST00000577625 FBN1P35555 2871 aaKnown RBP9.87□□□□□ -0.83
RNF43-202ENST00000577625 WFDC9Q8NEX5 89 aa9.87□□□□□ -0.83
RNF43-202ENST00000577625 MRAPQ8TCY5 172 aa9.87□□□□□ -0.83
RNF43-202ENST00000577625 TRAV8-3A0A0A6YYJ7 113 aa9.86□□□□□ -0.83
RNF43-202ENST00000577625 IGHV3-73A0A0B4J1V6 119 aa9.86□□□□□ -0.83
RNF43-202ENST00000577625 I3L3M4 83 aa9.86□□□□□ -0.83
RNF43-202ENST00000577625 RS1O15537 224 aa9.86□□□□□ -0.83
RNF43-202ENST00000577625 LITAFQ99732 161 aa9.86□□□□□ -0.83
RNF43-202ENST00000577625 hADV29S1A0JD25 119 aa9.85□□□□□ -0.83
RNF43-202ENST00000577625 PRSS2P07478 247 aa9.84□□□□□ -0.83
RNF43-202ENST00000577625 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
RNF43-202ENST00000577625 IGHV3-64A0A075B6Q5 118 aa9.84□□□□□ -0.83
RNF43-202ENST00000577625 IGHV3-53P01767 116 aa9.84□□□□□ -0.83
RNF43-202ENST00000577625 RHOHQ15669 191 aa9.84□□□□□ -0.83
RNF43-202ENST00000577625 TIMM21Q9BVV7 248 aa9.84□□□□□ -0.83
RNF43-202ENST00000577625 PLAC8L1A1L4L8 177 aa9.83□□□□□ -0.84
RNF43-202ENST00000577625 DAZ2Q13117 558 aaKnown RBP9.83□□□□□ -0.84
RNF43-202ENST00000577625 PRIMA1Q86XR5 153 aa9.83□□□□□ -0.84
RNF43-202ENST00000577625 KIR2DL5BQ8NHK3 375 aa9.83□□□□□ -0.84
RNF43-202ENST00000577625 TRGV1A0A0A0MS02 117 aa9.82□□□□□ -0.84
RNF43-202ENST00000577625 MIAQ16674 131 aa9.82□□□□□ -0.84
RNF43-202ENST00000577625 Q6ZSN1 163 aa9.82□□□□□ -0.84
RNF43-202ENST00000577625 COL6A5A8TX70 2615 aa9.82□□□□□ -0.84
RNF43-202ENST00000577625 DEFB104AQ8WTQ1 72 aa9.82□□□□□ -0.84
RNF43-202ENST00000577625 C4orf26Q17RF5 130 aa9.81□□□□□ -0.84
RNF43-202ENST00000577625 Q6ZTI0 123 aa9.81□□□□□ -0.84
RNF43-202ENST00000577625 IGHV3-30-3P0DP02 117 aa9.81□□□□□ -0.84
RNF43-202ENST00000577625 DAND5Q8N907 189 aa9.81□□□□□ -0.84
RNF43-202ENST00000577625 Q5XG85 94 aa9.8□□□□□ -0.84
RNF43-202ENST00000577625 CYSTM1Q9H1C7 97 aa9.8□□□□□ -0.84
RNF43-202ENST00000577625 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
RNF43-202ENST00000577625 NBEAL2Q6ZNJ1 2754 aa9.8□□□□□ -0.84
RNF43-202ENST00000577625 RPL18AQ02543 176 aaKnown RBP9.8□□□□□ -0.84
RNF43-202ENST00000577625 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
RNF43-202ENST00000577625 OVOL2Q9BRP0 275 aa9.8□□□□□ -0.84
RNF43-202ENST00000577625 Q9UF83 564 aa9.8□□□□□ -0.84
RNF43-202ENST00000577625 PKD1L1Q8TDX9 2849 aa9.79□□□□□ -0.84
RNF43-202ENST00000577625 HRCT1Q6UXD1 115 aa9.79□□□□□ -0.84
RNF43-202ENST00000577625 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
RNF43-202ENST00000577625 OXTP01178 125 aa9.78□□□□□ -0.84
RNF43-202ENST00000577625 A0A0J9YXV3 536 aa9.78□□□□□ -0.84
RNF43-202ENST00000577625 SERP2Q8N6R1 65 aa9.78□□□□□ -0.84
RNF43-202ENST00000577625 OPRPNQ99935 248 aaPredicted RBP9.78□□□□□ -0.84
RNF43-202ENST00000577625 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
RNF43-202ENST00000577625 INAFM2P0DMQ5 153 aa9.77□□□□□ -0.85
RNF43-202ENST00000577625 DAZ4Q86SG3 579 aaKnown RBP9.77□□□□□ -0.85
RNF43-202ENST00000577625 DAZ3Q9NR90 486 aaKnown RBP9.77□□□□□ -0.85
RNF43-202ENST00000577625 COX7A2LO14548 114 aa9.77□□□□□ -0.85
RNF43-202ENST00000577625 DSCR8Q96T75 97 aa9.77□□□□□ -0.85
RNF43-202ENST00000577625 NDUFA12Q9UI09 145 aa9.76□□□□□ -0.85
RNF43-202ENST00000577625 TRAV13-1A0A0B4J241 112 aa9.75□□□□□ -0.85
RNF43-202ENST00000577625 TRBV10-1A0A0K0K1A3 114 aa9.75□□□□□ -0.85
RNF43-202ENST00000577625 TIMM17BO60830 172 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms