RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 TNFRSF6BO95407 300 aa5.9□□□□□ -1.46
PRPF8-213ENST00000576407 PPP1R17O96001 155 aa5.9□□□□□ -1.46
PRPF8-213ENST00000576407 NPYP01303 97 aa5.9□□□□□ -1.46
PRPF8-213ENST00000576407 FCER1GP30273 86 aa5.9□□□□□ -1.46
PRPF8-213ENST00000576407 XGP55808 180 aa5.9□□□□□ -1.46
PRPF8-213ENST00000576407 NDUFV3P56181 108 aaKnown RBP5.9□□□□□ -1.46
PRPF8-213ENST00000576407 LYPD5Q6UWN5 251 aa5.9□□□□□ -1.46
PRPF8-213ENST00000576407 IMUPQ9GZP8 106 aa5.9□□□□□ -1.46
PRPF8-213ENST00000576407 SS18L2Q9UHA2 77 aa5.9□□□□□ -1.46
PRPF8-213ENST00000576407 A0A096LNJ9 63 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 TRAV12-1A0A0B4J245 112 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 IGHV3-38A0A0C4DH36 116 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 A0A1B0GX51 115 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 SDHAF1A6NFY7 115 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 SUMO2P61956 95 aaKnown RBP5.89□□□□□ -1.47
PRPF8-213ENST00000576407 ODF1Q14990 250 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 ESRGQ1W209 222 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 DAZ4Q86SG3 579 aaKnown RBP5.89□□□□□ -1.47
PRPF8-213ENST00000576407 C20orf78Q9BR46 151 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 KRTAP3-3Q9BYR6 98 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
PRPF8-213ENST00000576407 DAZ3Q9NR90 486 aaKnown RBP5.89□□□□□ -1.47
PRPF8-213ENST00000576407 A0A087WX48 190 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 MYMXA0A1B0GTQ4 84 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 B5MCH6 92 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 MT-ATP8P03928 68 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 SCGB1C2P0DMR2 95 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 POLR2KP53803 58 aaKnown RBP5.88□□□□□ -1.47
PRPF8-213ENST00000576407 CCL18P55774 89 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
PRPF8-213ENST00000576407 LCE2DQ5TA82 110 aaPredicted RBP5.88□□□□□ -1.47
PRPF8-213ENST00000576407 DEFB104AQ8WTQ1 72 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 LINC00588Q9Y4M8 146 aa5.88□□□□□ -1.47
PRPF8-213ENST00000576407 TRBV27A0A0K0K1C4 114 aa5.87□□□□□ -1.47
PRPF8-213ENST00000576407 I3L3M4 83 aa5.87□□□□□ -1.47
PRPF8-213ENST00000576407 RPL13AP40429 203 aaKnown RBP5.87□□□□□ -1.47
PRPF8-213ENST00000576407 UBE2D1P51668 147 aa5.87□□□□□ -1.47
PRPF8-213ENST00000576407 TIRAPP58753 221 aa5.87□□□□□ -1.47
PRPF8-213ENST00000576407 PAPPA-AS1Q5QFB9 102 aa5.87□□□□□ -1.47
PRPF8-213ENST00000576407 NTM-AS1Q6ZSK4 140 aa5.87□□□□□ -1.47
PRPF8-213ENST00000576407 PCP2Q8IVA1 136 aa5.87□□□□□ -1.47
PRPF8-213ENST00000576407 HIST1H4GQ99525 98 aa5.87□□□□□ -1.47
PRPF8-213ENST00000576407 PLECQ15149 4684 aaKnown RBP5.87□□□□□ -1.47
PRPF8-213ENST00000576407 TRBV6-8A0A0A6YYG3 113 aa5.86□□□□□ -1.47
PRPF8-213ENST00000576407 LOC389332A0A1B0GUA5 103 aa5.86□□□□□ -1.47
PRPF8-213ENST00000576407 PRSS29PA6NIE9 313 aa5.86□□□□□ -1.47
PRPF8-213ENST00000576407 VCYO14598 125 aa5.86□□□□□ -1.47
PRPF8-213ENST00000576407 LELP1Q5T871 98 aa5.86□□□□□ -1.47
PRPF8-213ENST00000576407 UBE2DNLQ8IWF7 75 aa5.86□□□□□ -1.47
PRPF8-213ENST00000576407 SMIM20Q8N5G0 67 aa5.86□□□□□ -1.47
PRPF8-213ENST00000576407 SMIM2Q9BVW6 85 aa5.86□□□□□ -1.47
PRPF8-213ENST00000576407 TSHBP01222 138 aa5.85□□□□□ -1.47
PRPF8-213ENST00000576407 ACYP1P07311 99 aa5.85□□□□□ -1.47
PRPF8-213ENST00000576407 IFI27P40305 119 aaPredicted RBP5.85□□□□□ -1.47
PRPF8-213ENST00000576407 KIR2DL4Q99706 377 aa5.85□□□□□ -1.47
PRPF8-213ENST00000576407 NAA38Q9BRA0 125 aaKnown RBP5.85□□□□□ -1.47
PRPF8-213ENST00000576407 IGLV2-18A0A075B6J9 118 aa5.84□□□□□ -1.47
PRPF8-213ENST00000576407 TRBV7-7A0A0K0K1E9 115 aa5.84□□□□□ -1.47
PRPF8-213ENST00000576407 LY6G6CO95867 125 aa5.84□□□□□ -1.47
PRPF8-213ENST00000576407 ZC2HC1BQ5TFG8 222 aa5.84□□□□□ -1.47
PRPF8-213ENST00000576407 WFDC10BQ8IUB3 73 aa5.84□□□□□ -1.47
PRPF8-213ENST00000576407 Q8N8P6 123 aa5.84□□□□□ -1.47
PRPF8-213ENST00000576407 LINC00476Q8WZB0 136 aa5.84□□□□□ -1.47
PRPF8-213ENST00000576407 UPK3BQ9BT76 320 aa5.84□□□□□ -1.47
PRPF8-213ENST00000576407 F8VRH5 84 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 J3KT08 172 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 PRSS1P07477 247 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 NFE4Q86UQ8 179 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 OR13C6PQ8NH95 151 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 CHCHD5Q9BSY4 110 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 TMEM243Q9BU79 118 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 CHCHD7Q9BUK0 85 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 Q9H8V8 135 aa5.83□□□□□ -1.48
PRPF8-213ENST00000576407 K7ERJ3 54 aa5.82□□□□□ -1.48
PRPF8-213ENST00000576407 SMCPP49901 116 aaPredicted RBP5.82□□□□□ -1.48
PRPF8-213ENST00000576407 VPS13DQ5THJ4 4388 aa5.82□□□□□ -1.48
PRPF8-213ENST00000576407 DNAH1Q9P2D7 4330 aa5.82□□□□□ -1.48
PRPF8-213ENST00000576407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.81□□□□□ -1.48
PRPF8-213ENST00000576407 IGKV2-29A2NJV5 120 aaPredicted RBP5.81□□□□□ -1.48
PRPF8-213ENST00000576407 DNAH10OSP0CZ25 163 aa5.81□□□□□ -1.48
PRPF8-213ENST00000576407 HERVK_113P61574 105 aa5.81□□□□□ -1.48
PRPF8-213ENST00000576407 LAGE3Q14657 143 aa5.81□□□□□ -1.48
PRPF8-213ENST00000576407 ORMDL2Q53FV1 153 aa5.81□□□□□ -1.48
PRPF8-213ENST00000576407 Q8N3U1 123 aa5.81□□□□□ -1.48
PRPF8-213ENST00000576407 C10orf126Q8N4M7 172 aa5.81□□□□□ -1.48
PRPF8-213ENST00000576407 TMEM101Q96IK0 257 aa5.81□□□□□ -1.48
PRPF8-213ENST00000576407 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
PRPF8-213ENST00000576407 IGKV2D-26A0A0A0MRZ7 120 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 LCE6AA0A183 80 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 H3BT86 120 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 H7C423 109 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 UBE2L6O14933 153 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 UQCRQO14949 82 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 IGHV3-30P01768 117 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 IGHV3-33P01772 117 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 IGHV3-30-5P0DP03 117 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 LINC01556Q5JQF7 62 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 MEIG1Q5JSS6 88 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms