RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 MUSTN1Q8IVN3 82 aa11.26□□□□□ -0.61
SMPD3-212ENST00000574662 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
SMPD3-212ENST00000574662 SPANXCQ9NY87 97 aa11.26□□□□□ -0.61
SMPD3-212ENST00000574662 CELA1Q9UNI1 258 aa11.26□□□□□ -0.61
SMPD3-212ENST00000574662 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
SMPD3-212ENST00000574662 FAM222AQ5U5X8 452 aa11.26□□□□□ -0.61
SMPD3-212ENST00000574662 CHCHD7Q9BUK0 85 aa11.26□□□□□ -0.61
SMPD3-212ENST00000574662 UBE2D4Q9Y2X8 147 aa11.26□□□□□ -0.61
SMPD3-212ENST00000574662 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
SMPD3-212ENST00000574662 GAGE7O76087 117 aa11.25□□□□□ -0.61
SMPD3-212ENST00000574662 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
SMPD3-212ENST00000574662 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
SMPD3-212ENST00000574662 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
SMPD3-212ENST00000574662 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
SMPD3-212ENST00000574662 RS1O15537 224 aa11.24□□□□□ -0.61
SMPD3-212ENST00000574662 DEFB130BP0DP73 79 aa11.23□□□□□ -0.61
SMPD3-212ENST00000574662 DEFB130AP0DP74 79 aa11.23□□□□□ -0.61
SMPD3-212ENST00000574662 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
SMPD3-212ENST00000574662 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
SMPD3-212ENST00000574662 NHLRC4P0CG21 123 aaPredicted RBP11.23□□□□□ -0.61
SMPD3-212ENST00000574662 Q1RN00 199 aa11.23□□□□□ -0.61
SMPD3-212ENST00000574662 VSIG2Q96IQ7 327 aa11.23□□□□□ -0.61
SMPD3-212ENST00000574662 LITAFQ99732 161 aa11.23□□□□□ -0.61
SMPD3-212ENST00000574662 C11orf68Q9H3H3 251 aaKnown RBP11.23□□□□□ -0.61
SMPD3-212ENST00000574662 NDUFA12Q9UI09 145 aa11.23□□□□□ -0.61
SMPD3-212ENST00000574662 ATXN8Q156A1 80 aa11.22□□□□□ -0.61
SMPD3-212ENST00000574662 TRBV30A0A0K0K1B3 111 aa11.21□□□□□ -0.61
SMPD3-212ENST00000574662 SLC25A20O43772 301 aa11.21□□□□□ -0.61
SMPD3-212ENST00000574662 EIF4EBP3O60516 100 aaPredicted RBP11.21□□□□□ -0.61
SMPD3-212ENST00000574662 TIMM17BO60830 172 aa11.21□□□□□ -0.61
SMPD3-212ENST00000574662 SPART-AS1P0CW21 52 aa11.21□□□□□ -0.61
SMPD3-212ENST00000574662 MIAQ16674 131 aa11.21□□□□□ -0.61
SMPD3-212ENST00000574662 ANKRD29Q8N6D5 301 aa11.21□□□□□ -0.61
SMPD3-212ENST00000574662 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.61
SMPD3-212ENST00000574662 ZFAND6Q6FIF0 208 aa11.21□□□□□ -0.62
SMPD3-212ENST00000574662 CEMP1Q6PRD7 247 aaPredicted RBP11.21□□□□□ -0.62
SMPD3-212ENST00000574662 Q6ZSN1 163 aa11.21□□□□□ -0.62
SMPD3-212ENST00000574662 Q6ZUT4 128 aa11.21□□□□□ -0.62
SMPD3-212ENST00000574662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
SMPD3-212ENST00000574662 TRAV8-3A0A0A6YYJ7 113 aa11.2□□□□□ -0.62
SMPD3-212ENST00000574662 A0A1B0GV72 72 aa11.2□□□□□ -0.62
SMPD3-212ENST00000574662 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
SMPD3-212ENST00000574662 TIRAPP58753 221 aa11.2□□□□□ -0.62
SMPD3-212ENST00000574662 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
SMPD3-212ENST00000574662 LINC01600Q96MT4 127 aa11.2□□□□□ -0.62
SMPD3-212ENST00000574662 CDIP1Q9H305 208 aa11.2□□□□□ -0.62
SMPD3-212ENST00000574662 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
SMPD3-212ENST00000574662 C9JAW5 83 aa11.19□□□□□ -0.62
SMPD3-212ENST00000574662 TMEM262E9PQX1 116 aa11.19□□□□□ -0.62
SMPD3-212ENST00000574662 TGP01266 2768 aa11.19□□□□□ -0.62
SMPD3-212ENST00000574662 IGLV5-45A0A087WSX0 123 aa11.18□□□□□ -0.62
SMPD3-212ENST00000574662 IFITM1P13164 125 aa11.18□□□□□ -0.62
SMPD3-212ENST00000574662 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
SMPD3-212ENST00000574662 H7C2G1 150 aa11.18□□□□□ -0.62
SMPD3-212ENST00000574662 SPINK8P0C7L1 97 aa11.18□□□□□ -0.62
SMPD3-212ENST00000574662 DAD1P61803 113 aa11.18□□□□□ -0.62
SMPD3-212ENST00000574662 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
SMPD3-212ENST00000574662 NACAE9PAV3 2078 aa11.17□□□□□ -0.62
SMPD3-212ENST00000574662 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
SMPD3-212ENST00000574662 NDUFA1O15239 70 aa11.16□□□□□ -0.62
SMPD3-212ENST00000574662 NANOS2P60321 138 aaKnown RBP11.16□□□□□ -0.62
SMPD3-212ENST00000574662 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
SMPD3-212ENST00000574662 TRBV10-1A0A0K0K1A3 114 aa11.16□□□□□ -0.62
SMPD3-212ENST00000574662 PRSS2P07478 247 aa11.16□□□□□ -0.62
SMPD3-212ENST00000574662 COX6CP09669 75 aa11.16□□□□□ -0.62
SMPD3-212ENST00000574662 HERVK_113P63121 156 aa11.16□□□□□ -0.62
SMPD3-212ENST00000574662 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
SMPD3-212ENST00000574662 ICOSQ9Y6W8 199 aa11.16□□□□□ -0.62
SMPD3-212ENST00000574662 STAB2Q8WWQ8 2551 aa11.15□□□□□ -0.62
SMPD3-212ENST00000574662 IGHV3-38A0A0C4DH36 116 aa11.15□□□□□ -0.62
SMPD3-212ENST00000574662 FHL2Q14192 279 aa11.15□□□□□ -0.62
SMPD3-212ENST00000574662 FAM19A3Q7Z5A8 133 aa11.15□□□□□ -0.62
SMPD3-212ENST00000574662 Q9UF83 564 aa11.15□□□□□ -0.62
SMPD3-212ENST00000574662 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
SMPD3-212ENST00000574662 TRIAP1O43715 76 aa11.14□□□□□ -0.63
SMPD3-212ENST00000574662 CIDEAO60543 219 aa11.14□□□□□ -0.63
SMPD3-212ENST00000574662 Q6ZTC4 211 aa11.14□□□□□ -0.63
SMPD3-212ENST00000574662 RPL36AP83881 106 aaKnown RBP11.13□□□□□ -0.63
SMPD3-212ENST00000574662 CIRBPQ14011 172 aaKnown RBP11.13□□□□□ -0.63
SMPD3-212ENST00000574662 ADAMTSL4-AS1Q5T5F5 129 aa11.13□□□□□ -0.63
SMPD3-212ENST00000574662 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
SMPD3-212ENST00000574662 RPL36ALQ969Q0 106 aaKnown RBP11.13□□□□□ -0.63
SMPD3-212ENST00000574662 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
SMPD3-212ENST00000574662 K7EQD1 137 aa11.13□□□□□ -0.63
SMPD3-212ENST00000574662 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
SMPD3-212ENST00000574662 RPL13AP40429 203 aaKnown RBP11.12□□□□□ -0.63
SMPD3-212ENST00000574662 DAZ4Q86SG3 579 aaKnown RBP11.12□□□□□ -0.63
SMPD3-212ENST00000574662 DAZ3Q9NR90 486 aaKnown RBP11.12□□□□□ -0.63
SMPD3-212ENST00000574662 IGLV5-39A0A0G2JS06 123 aa11.11□□□□□ -0.63
SMPD3-212ENST00000574662 ATP5G1P05496 136 aa11.11□□□□□ -0.63
SMPD3-212ENST00000574662 HTN3P15516 51 aa11.11□□□□□ -0.63
SMPD3-212ENST00000574662 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
SMPD3-212ENST00000574662 TRGV4A0A0C4DH28 118 aa11.11□□□□□ -0.63
SMPD3-212ENST00000574662 H3BT86 120 aa11.11□□□□□ -0.63
SMPD3-212ENST00000574662 XGP55808 180 aa11.11□□□□□ -0.63
SMPD3-212ENST00000574662 MT-ATP8P03928 68 aa11.1□□□□□ -0.63
SMPD3-212ENST00000574662 F5H768 121 aa11.09□□□□□ -0.63
SMPD3-212ENST00000574662 CKS1BP61024 79 aa11.09□□□□□ -0.63
SMPD3-212ENST00000574662 NTN5Q8WTR8 489 aaPredicted RBP11.09□□□□□ -0.63
SMPD3-212ENST00000574662 LINC00242Q5T6M2 205 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms