RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 ARL3P36405 182 aa4.8□□□□□ -1.64
NUP88-206ENST00000573169 TTC32Q5I0X7 151 aa4.8□□□□□ -1.64
NUP88-206ENST00000573169 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
NUP88-206ENST00000573169 SDIM1Q6ZPB5 146 aa4.8□□□□□ -1.64
NUP88-206ENST00000573169 UBE2E2Q96LR5 201 aa4.8□□□□□ -1.64
NUP88-206ENST00000573169 B5MCH6 92 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 H3BMM0 161 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 I3L3M4 83 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 LST1O00453 97 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 RPL39P62891 51 aaKnown RBP4.79□□□□□ -1.64
NUP88-206ENST00000573169 FAM159AQ6UWV7 190 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 FAM104AQ969W3 186 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 UBE2WQ96B02 151 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 TMEM126AQ9H061 195 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 SACSQ9NZJ4 4579 aa4.79□□□□□ -1.64
NUP88-206ENST00000573169 TENM3Q9P273 2699 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 IGHV3OR16-13A0A075B7E8 117 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 IGHV3-49A0A0A0MS15 119 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 IGHV3-74A0A0B4J1X5 117 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 IGHV1-58A0A0C4DH39 117 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 TINCRA0A1B0GVN0 87 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 H7C423 109 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 TRIAP1O43715 76 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 GYPEP15421 78 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 ID1P41134 155 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 MIAQ16674 131 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 SFTA2Q6UW10 78 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 UNQ9165/PRO28630Q6UXU0 137 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 C15orf53Q8NAA6 179 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 DCANP1Q8TF63 244 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 SS18L2Q9UHA2 77 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 ICOSQ9Y6W8 199 aa4.78□□□□□ -1.64
NUP88-206ENST00000573169 DNAH7Q8WXX0 4024 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 TRAV2A0A0B4J234 112 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 ATP5G1P05496 136 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 COX6CP09669 75 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 IGHV3-30-3P0DP02 117 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 C2orf82Q6UX34 121 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
NUP88-206ENST00000573169 A0A0J9YXV3 536 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 TEX49A0A1B0GTD5 131 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 A8MTW9 85 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 C3orf84H3BNL1 204 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 SPRY2O43597 315 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 EMP1P54849 157 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 TIRAPP58753 221 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 FAM19A3Q7Z5A8 133 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 MUC7Q8TAX7 377 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 VSIG2Q96IQ7 327 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 RHPN1-AS1Q9BWJ2 59 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 JPT2Q9H910 190 aa4.76□□□□□ -1.65
NUP88-206ENST00000573169 DAZ1Q9NQZ3 744 aaKnown RBP4.76□□□□□ -1.65
NUP88-206ENST00000573169 IGHV1OR15-1A0A075B7D0 117 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 F6UB75 175 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 TRBV12-3P01733 135 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 CASC10Q5T4H9 136 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 FAM222AQ5U5X8 452 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 CFAP161Q6P656 301 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 TMEM101Q96IK0 257 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 LINC01587Q99440 93 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 LINC00467Q9BRT7 94 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 TIMM21Q9BVV7 248 aa4.75□□□□□ -1.65
NUP88-206ENST00000573169 STARD9Q9P2P6 4700 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
NUP88-206ENST00000573169 TRGV11A0A075B6L2 103 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 A0A087WWL8 130 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 IGLV5-39A0A0G2JS06 123 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 F5H697 171 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 K7EQG2 157 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 NDUFA1O15239 70 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 TRACP01848 142 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 IGHV4-30-4P0DP06 118 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 CXCL5P42830 114 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 ADAMTSL4-AS1Q5T5F5 129 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 LINC00643Q86TS7 51 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 DAND5Q8N907 189 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 DNAJC30Q96LL9 226 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 OPRPNQ99935 248 aaPredicted RBP4.74□□□□□ -1.65
NUP88-206ENST00000573169 NDUFA12Q9UI09 145 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 MUC4Q99102 2169 aa4.74□□□□□ -1.65
NUP88-206ENST00000573169 J3KRW8 73 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 IGLV1-51P01701 117 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 SYNJ2BPP57105 145 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 DEFB1P60022 68 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 Q1RN00 199 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 C5orf38Q86SI9 138 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 COPS9Q8WXC6 57 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 TM2D3Q9BRN9 247 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 TNFRSF18Q9Y5U5 241 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 BIRC6Q9NR09 4857 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 DNAH1Q9P2D7 4330 aa4.73□□□□□ -1.65
NUP88-206ENST00000573169 HYDINQ4G0P3 5121 aa4.72□□□□□ -1.65
NUP88-206ENST00000573169 TRAV12-3A0A0B4J271 114 aa4.72□□□□□ -1.65
NUP88-206ENST00000573169 COX7A2LO14548 114 aa4.72□□□□□ -1.65
NUP88-206ENST00000573169 EDN2P20800 178 aa4.72□□□□□ -1.65
NUP88-206ENST00000573169 ZNF56Q15929 161 aa4.72□□□□□ -1.65
NUP88-206ENST00000573169 MEIG1Q5JSS6 88 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms