RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 SPTAN1Q13813 2472 aaKnown RBP1.89□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3OR16-8A0A075B7F1 116 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 IGKV2D-26A0A0A0MRZ7 120 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 LOC100131303A0A0U1RQF7 123 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 TMEM223A0PJW6 202 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 IGIPA6NJ69 53 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 H7C2G1 150 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 M0QY20 66 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 NDUFA1O15239 70 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 ZNF861PO60384 105 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-11P01762 117 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-30P01768 117 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-30-5P0DP03 117 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 EMP1P54849 157 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 WFDC2Q14508 124 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 FAM222AQ5U5X8 452 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 ATP5EP2Q5VTU8 51 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 Q6ZUT4 128 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 LRRC75A-AS1Q8N1F1 130 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 C4orf3Q8WVX3 66 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 RPL39LQ96EH5 51 aaKnown RBP1.89□□□□□ -2.11
ERCC4-204ENST00000573018 NAA38Q9BRA0 125 aaKnown RBP1.89□□□□□ -2.11
ERCC4-204ENST00000573018 ICOSQ9Y6W8 199 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 SPTBN5Q9NRC6 3674 aaKnown RBP1.89□□□□□ -2.11
ERCC4-204ENST00000573018 PLXNB1O43157 2135 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 CREBBPQ92793 2442 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 DNAH14Q0VDD8 3507 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 IGLV4-69A0A075B6H9 119 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 A0A1B0GX51 115 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 GNRH2O43555 120 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 LY6HO94772 140 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 TCL1BO95988 128 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-53P01767 116 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-33P01772 117 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 TRACP01848 142 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-30-3P0DP02 117 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 RNASE3P12724 160 aaKnown RBP1.88□□□□□ -2.11
ERCC4-204ENST00000573018 HTN1P15515 57 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 ZNF22P17026 224 aaPredicted RBP1.88□□□□□ -2.11
ERCC4-204ENST00000573018 PDE6GP18545 87 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 PSMB8P28062 276 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 CXCL5P42830 114 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 SYNJ2BPP57105 145 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 PRB3Q04118 309 aaPredicted RBP1.88□□□□□ -2.11
ERCC4-204ENST00000573018 EGFEM1PQ0D2K5 195 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 SPINK13Q1W4C9 94 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 AMTNQ6UX39 209 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 BRD3OSQ6XYD6 125 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 TMEM61Q8N0U2 210 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 SMIM20Q8N5G0 67 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 C15orf53Q8NAA6 179 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 DCANP1Q8TF63 244 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 TMEM263Q8WUH6 116 aaKnown RBP1.88□□□□□ -2.11
ERCC4-204ENST00000573018 FAM104AQ969W3 186 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 TMEM243Q9BU79 118 aa1.88□□□□□ -2.11
ERCC4-204ENST00000573018 CSDC2Q9Y534 153 aaKnown RBP1.88□□□□□ -2.11
ERCC4-204ENST00000573018 TRGV2A0A075B6R0 118 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 TRGV4A0A0C4DH28 118 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 JMJD7-PLA2G4BH0Y9G9 81 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 ATOX1O00244 68 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 LST1O00453 97 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 COX7A2LO14548 114 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 DEFB131AP59861 70 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 SS18Q15532 418 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 UNQ9165/PRO28630Q6UXU0 137 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 MUSTN1Q8IVN3 82 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 SBSPONQ8IVN8 264 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 DAND5Q8N907 189 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 LINC01600Q96MT4 127 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 AMELXQ99217 191 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 MYO18BQ8IUG5 2567 aa1.87□□□□□ -2.11
ERCC4-204ENST00000573018 SPTBN2O15020 2390 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 COL6A6A6NMZ7 2263 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-64A0A075B6Q5 118 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 TRAV12-2A0A075B6T6 113 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 TRGV1A0A0A0MS02 117 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 TRAV8-3A0A0A6YYJ7 113 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 A0A0J9YXV3 536 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 SMIM9A6NGZ8 99 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 IBA57-AS1B1ANH7 110 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 F6UB75 175 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 UQCRQO14949 82 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 RS1O15537 224 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 CRYGDP07320 174 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 INSL3P51460 131 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 LINC00158P58513 81 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 RPL39P62891 51 aaKnown RBP1.86□□□□□ -2.11
ERCC4-204ENST00000573018 COX17Q14061 63 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 DEFB112Q30KQ8 113 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 C6orf226Q5I0X4 101 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 PRR9Q5T870 116 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 FAM19A3Q7Z5A8 133 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 LINC01561Q8N1V8 128 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 OR13C6PQ8NH95 151 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 ZNRF2Q8NHG8 242 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 COX7B2Q8TF08 81 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 C7orf33Q8WU49 177 aa1.86□□□□□ -2.11
ERCC4-204ENST00000573018 UBL5Q9BZL1 73 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms