RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MUC21A0A140T8X8 626 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 TSTD3H0UI37 97 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 K7EMI3 77 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 GNRH2O43555 120 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 S100A4P26447 101 aaKnown RBP4.42□□□□□ -1.7
CHD3-213ENST00000571249 IFI27P40305 119 aaPredicted RBP4.42□□□□□ -1.7
CHD3-213ENST00000571249 COTL1Q14019 142 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 PMCHL1Q16048 86 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 MUC21Q5SSG8 566 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 SPANXN1Q5VSR9 72 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 FA2HQ7L5A8 372 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 Q8N8P6 123 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 BAALCQ8WXS3 180 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 MAP1LC3AQ9H492 121 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 PHLDA3Q9Y5J5 127 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 TRAV12-3A0A0B4J271 114 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 IGHV3-38A0A0C4DH36 116 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 C20orf202A1L168 122 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 LINC00587B1AMM8 73 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 SYS1-DBNDD2H3BUS1 97 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 LEPROTL1O95214 131 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 PPP1R17O96001 155 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 KRTDAPP60985 99 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 ZNF479Q96JC4 524 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 AP1S3Q96PC3 154 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 C20orf78Q9BR46 151 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 HSPB8Q9UJY1 196 aa4.41□□□□□ -1.7
CHD3-213ENST00000571249 SMKR1H3BMG3 65 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 NCR2O95944 276 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 IGHV3-53P01767 116 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 HBDP02042 147 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 DDTP30046 118 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 FCER1GP30273 86 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 CRYBA4P53673 196 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 LINC01545Q5VT33 79 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 PRO0255Q9UI72 69 aa4.4□□□□□ -1.71
CHD3-213ENST00000571249 USH2AO75445 5202 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
CHD3-213ENST00000571249 TRBV6-5A0A0K0K1A5 114 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 IGHV3-30P01768 117 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 IGHV3-33P01772 117 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 IGHV3-30-3P0DP02 117 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 IGHV3-30-5P0DP03 117 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 GATA1P15976 413 aaPredicted RBP4.39□□□□□ -1.71
CHD3-213ENST00000571249 DAZ2Q13117 558 aaKnown RBP4.39□□□□□ -1.71
CHD3-213ENST00000571249 LINC01556Q5JQF7 62 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 LINC00173Q6ZV60 143 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 MRPL52Q86TS9 123 aaKnown RBP4.39□□□□□ -1.71
CHD3-213ENST00000571249 LINC00469Q8N7U9 141 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 RASL10AQ92737 203 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 VAMP8Q9BV40 100 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 HHLA3Q9XRX5 114 aa4.39□□□□□ -1.71
CHD3-213ENST00000571249 TRGV1A0A0A0MS02 117 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 LOC389332A0A1B0GUA5 103 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 K7EQD1 137 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 ATP5LO75964 103 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 POLR2KP53803 58 aaKnown RBP4.38□□□□□ -1.71
CHD3-213ENST00000571249 CTAG1AP78358 180 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 LAGE3Q14657 143 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 C14orf178Q8N769 122 aaPredicted RBP4.38□□□□□ -1.71
CHD3-213ENST00000571249 C2orf48Q96LS8 159 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 MIEN1Q9BRT3 115 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 SMIM2Q9BVW6 85 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 PRO1933Q9H354 126 aa4.38□□□□□ -1.71
CHD3-213ENST00000571249 TRAV26-2A0A0B4J265 109 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 LINC01549A6NIU2 74 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 SMIM17P0DL12 118 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 FHL2Q14192 279 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 ORMDL2Q53FV1 153 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 UFSP1Q6NVU6 142 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 C11orf72Q8NBR9 251 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 IFI27L1Q96BM0 104 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 ST20Q9HBF5 79 aa4.37□□□□□ -1.71
CHD3-213ENST00000571249 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
CHD3-213ENST00000571249 TRBV27A0A0K0K1C4 114 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 A8MWV9 139 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 M0QY20 66 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 M0R2P5 195 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 IGLC3P0DOY3 106 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 G0S2P27469 103 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 PRR4Q16378 134 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 C14orf144Q96I85 54 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 JPT2Q9H910 190 aa4.36□□□□□ -1.71
CHD3-213ENST00000571249 TCAPO15273 167 aa4.35□□□□□ -1.71
CHD3-213ENST00000571249 MGPP08493 103 aa4.35□□□□□ -1.71
CHD3-213ENST00000571249 ZNF876PQ49A33 203 aa4.35□□□□□ -1.71
CHD3-213ENST00000571249 REG3GQ6UW15 175 aa4.35□□□□□ -1.71
CHD3-213ENST00000571249 ZFP2Q6ZN57 461 aa4.35□□□□□ -1.71
CHD3-213ENST00000571249 TOMM6Q96B49 74 aa4.35□□□□□ -1.71
CHD3-213ENST00000571249 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
CHD3-213ENST00000571249 UQCR10Q9UDW1 63 aa4.35□□□□□ -1.71
CHD3-213ENST00000571249 TRAV12-1A0A0B4J245 112 aa4.34□□□□□ -1.71
CHD3-213ENST00000571249 TRAV8-6A0A0B4J262 113 aa4.34□□□□□ -1.71
CHD3-213ENST00000571249 TRGV4A0A0C4DH28 118 aa4.34□□□□□ -1.71
CHD3-213ENST00000571249 H7C1H1 209 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms