RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 Q6JHZ5 121 aa11.04□□□□□ -0.64
SMG6-207ENST00000570756 hADV29S1A0JD25 119 aa11.04□□□□□ -0.64
SMG6-207ENST00000570756 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
SMG6-207ENST00000570756 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
SMG6-207ENST00000570756 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
SMG6-207ENST00000570756 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
SMG6-207ENST00000570756 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
SMG6-207ENST00000570756 CELSR1Q9NYQ6 3014 aa11.03□□□□□ -0.64
SMG6-207ENST00000570756 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
SMG6-207ENST00000570756 MSMBP08118 114 aa11.03□□□□□ -0.64
SMG6-207ENST00000570756 H0YGX0 51 aa11.03□□□□□ -0.64
SMG6-207ENST00000570756 TMEM258P61165 79 aa11.03□□□□□ -0.64
SMG6-207ENST00000570756 C10orf105Q8TEF2 133 aa11.02□□□□□ -0.65
SMG6-207ENST00000570756 INSP01308 110 aa11.01□□□□□ -0.65
SMG6-207ENST00000570756 SERP2Q8N6R1 65 aa11.01□□□□□ -0.65
SMG6-207ENST00000570756 SND1-IT1Q9HBX3 110 aa11.01□□□□□ -0.65
SMG6-207ENST00000570756 ANKRD17O75179 2603 aaKnown RBP11.01□□□□□ -0.65
SMG6-207ENST00000570756 NOTCH2Q04721 2471 aa11.01□□□□□ -0.65
SMG6-207ENST00000570756 RPL36AP83881 106 aaKnown RBP11.01□□□□□ -0.65
SMG6-207ENST00000570756 LINC00337Q8N6G1 96 aa11.01□□□□□ -0.65
SMG6-207ENST00000570756 RPL36ALQ969Q0 106 aaKnown RBP11.01□□□□□ -0.65
SMG6-207ENST00000570756 C14orf132Q9NPU4 83 aa11.01□□□□□ -0.65
SMG6-207ENST00000570756 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
SMG6-207ENST00000570756 CDC42SE2Q9NRR3 84 aa11□□□□□ -0.65
SMG6-207ENST00000570756 UBE2E2Q96LR5 201 aa11□□□□□ -0.65
SMG6-207ENST00000570756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■□□ 15.9
SMG6-207ENST00000570756 TRBV10-1A0A0K0K1A3 114 aa10.99□□□□□ -0.65
SMG6-207ENST00000570756 IGHV4-59P01825 116 aa10.99□□□□□ -0.65
SMG6-207ENST00000570756 MIR7-3HGQ8N6C7 128 aa10.99□□□□□ -0.65
SMG6-207ENST00000570756 CCDC168Q8NDH2 2452 aa10.99□□□□□ -0.65
SMG6-207ENST00000570756 A0A087WYN8 130 aa10.99□□□□□ -0.65
SMG6-207ENST00000570756 IGKV3D-7A0A0C4DH55 119 aa10.99□□□□□ -0.65
SMG6-207ENST00000570756 SMIM11BQ8TCY0 68 aa10.99□□□□□ -0.65
SMG6-207ENST00000570756 NAV2Q8IVL1 2488 aa10.99□□□□□ -0.65
SMG6-207ENST00000570756 IGKV2-28A0A075B6P5 120 aa10.98□□□□□ -0.65
SMG6-207ENST00000570756 IGKV2D-28P01615 120 aa10.98□□□□□ -0.65
SMG6-207ENST00000570756 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
SMG6-207ENST00000570756 CREBBPQ92793 2442 aa10.97□□□□□ -0.65
SMG6-207ENST00000570756 COX7B2Q8TF08 81 aa10.97□□□□□ -0.65
SMG6-207ENST00000570756 K7EQD1 137 aa10.97□□□□□ -0.65
SMG6-207ENST00000570756 SETXQ7Z333 2677 aaKnown RBP10.97□□□□□ -0.65
SMG6-207ENST00000570756 ZANQ9Y493 2812 aa10.97□□□□□ -0.65
SMG6-207ENST00000570756 UBE2L6O14933 153 aa10.96□□□□□ -0.65
SMG6-207ENST00000570756 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.65
SMG6-207ENST00000570756 CCL19Q99731 98 aa10.96□□□□□ -0.65
SMG6-207ENST00000570756 Q96MF0 132 aa10.96□□□□□ -0.66
SMG6-207ENST00000570756 B4DSR2 109 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 AVPP01185 164 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 DEFB112Q30KQ8 113 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 C9orf129Q5T035 196 aaKnown RBP10.95□□□□□ -0.66
SMG6-207ENST00000570756 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 IGHV4-30-2A0A087WSY4 118 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 TRGV1A0A0A0MS02 117 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 USP17L23D6RBM5 183 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 LINC00158P58513 81 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 DPH3Q96FX2 82 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 CYSTM1Q9H1C7 97 aa10.95□□□□□ -0.66
SMG6-207ENST00000570756 LECT2O14960 151 aa10.94□□□□□ -0.66
SMG6-207ENST00000570756 ATP5J2P56134 94 aa10.94□□□□□ -0.66
SMG6-207ENST00000570756 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
SMG6-207ENST00000570756 BAHCC1Q9P281 2608 aa10.93□□□□□ -0.66
SMG6-207ENST00000570756 SLURP1P55000 103 aa10.93□□□□□ -0.66
SMG6-207ENST00000570756 S100A7L2Q5SY68 101 aa10.93□□□□□ -0.66
SMG6-207ENST00000570756 LINC01561Q8N1V8 128 aa10.93□□□□□ -0.66
SMG6-207ENST00000570756 ZNF469Q96JG9 3925 aaPredicted RBP10.93□□□□□ -0.66
SMG6-207ENST00000570756 A0A087WVE0 104 aa10.93□□□□□ -0.66
SMG6-207ENST00000570756 TOMM7Q9P0U1 55 aa10.93□□□□□ -0.66
SMG6-207ENST00000570756 CCL18P55774 89 aa10.92□□□□□ -0.66
SMG6-207ENST00000570756 KRTAP10-9P60411 292 aa10.92□□□□□ -0.66
SMG6-207ENST00000570756 NCR3O14931 201 aa10.92□□□□□ -0.66
SMG6-207ENST00000570756 ORMDL1Q9P0S3 153 aa10.92□□□□□ -0.66
SMG6-207ENST00000570756 IBA57-AS1B1ANH7 110 aa10.91□□□□□ -0.66
SMG6-207ENST00000570756 IL17DQ8TAD2 202 aa10.91□□□□□ -0.66
SMG6-207ENST00000570756 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
SMG6-207ENST00000570756 PDZD2O15018 2839 aa10.91□□□□□ -0.66
SMG6-207ENST00000570756 ATP5EP2Q5VTU8 51 aa10.9□□□□□ -0.66
SMG6-207ENST00000570756 KIR2DL5BQ8NHK3 375 aa10.9□□□□□ -0.66
SMG6-207ENST00000570756 XCL2Q9UBD3 114 aa10.9□□□□□ -0.66
SMG6-207ENST00000570756 CSPG4Q6UVK1 2322 aa10.9□□□□□ -0.67
SMG6-207ENST00000570756 CCKP06307 115 aa10.89□□□□□ -0.67
SMG6-207ENST00000570756 DEFB136Q30KP8 78 aa10.89□□□□□ -0.67
SMG6-207ENST00000570756 PAX4O43316 350 aa10.88□□□□□ -0.67
SMG6-207ENST00000570756 WIPF1O43516 503 aa10.88□□□□□ -0.67
SMG6-207ENST00000570756 ZNF702PQ9H963 129 aa10.87□□□□□ -0.67
SMG6-207ENST00000570756 AKAP9Q99996 3911 aa10.87□□□□□ -0.67
SMG6-207ENST00000570756 TEX15Q9BXT5 2789 aa10.87□□□□□ -0.67
SMG6-207ENST00000570756 JMJD7-PLA2G4BH0Y9G9 81 aa10.87□□□□□ -0.67
SMG6-207ENST00000570756 DSCR8Q96T75 97 aa10.87□□□□□ -0.67
SMG6-207ENST00000570756 Q6ZTI0 123 aa10.86□□□□□ -0.67
SMG6-207ENST00000570756 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
SMG6-207ENST00000570756 LY6G6DO95868 133 aa10.86□□□□□ -0.67
SMG6-207ENST00000570756 SLPIP03973 132 aa10.86□□□□□ -0.67
SMG6-207ENST00000570756 STHQ8IWL8 128 aa10.86□□□□□ -0.67
SMG6-207ENST00000570756 NDUFC2-KCTD14E9PQ53 114 aa10.85□□□□□ -0.67
SMG6-207ENST00000570756 PFN2P35080 140 aa10.85□□□□□ -0.67
SMG6-207ENST00000570756 C1orf158Q8N1D5 194 aa10.85□□□□□ -0.67
SMG6-207ENST00000570756 NDUFC2O95298 119 aa10.85□□□□□ -0.67
SMG6-207ENST00000570756 C18orf65Q6ZTR6 163 aa10.85□□□□□ -0.67
SMG6-207ENST00000570756 ITPR3Q14573 2671 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms