RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 C1orf158Q8N1D5 194 aa11.01□□□□□ -0.65
USP43-202ENST00000570475 USP24Q9UPU5 2620 aa11.01□□□□□ -0.65
USP43-202ENST00000570475 C4orf3Q8WVX3 66 aa11.01□□□□□ -0.65
USP43-202ENST00000570475 DNAJC30Q96LL9 226 aa11.01□□□□□ -0.65
USP43-202ENST00000570475 SPANXDQ9BXN6 97 aa11.01□□□□□ -0.65
USP43-202ENST00000570475 SPANXCQ9NY87 97 aa11.01□□□□□ -0.65
USP43-202ENST00000570475 LST1O00453 97 aa11□□□□□ -0.65
USP43-202ENST00000570475 CFAP161Q6P656 301 aa11□□□□□ -0.65
USP43-202ENST00000570475 C11orf72Q8NBR9 251 aa11□□□□□ -0.65
USP43-202ENST00000570475 FASNP49327 2511 aaKnown RBP11□□□□□ -0.65
USP43-202ENST00000570475 NDUFA1O15239 70 aa11□□□□□ -0.65
USP43-202ENST00000570475 HTN3P15516 51 aa11□□□□□ -0.65
USP43-202ENST00000570475 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
USP43-202ENST00000570475 DEFB113Q30KQ7 82 aa10.99□□□□□ -0.65
USP43-202ENST00000570475 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
USP43-202ENST00000570475 HECTD1Q9ULT8 2610 aa10.99□□□□□ -0.65
USP43-202ENST00000570475 H3BT86 120 aa10.99□□□□□ -0.65
USP43-202ENST00000570475 DAZ2Q13117 558 aaKnown RBP10.99□□□□□ -0.65
USP43-202ENST00000570475 DAZ4Q86SG3 579 aaKnown RBP10.99□□□□□ -0.65
USP43-202ENST00000570475 SBSPONQ8IVN8 264 aa10.99□□□□□ -0.65
USP43-202ENST00000570475 SND1-IT1Q9HBX3 110 aa10.99□□□□□ -0.65
USP43-202ENST00000570475 DAZ3Q9NR90 486 aaKnown RBP10.99□□□□□ -0.65
USP43-202ENST00000570475 DEFB4AO15263 64 aa10.98□□□□□ -0.65
USP43-202ENST00000570475 SMIM1B2RUZ4 78 aa10.98□□□□□ -0.65
USP43-202ENST00000570475 COPS9Q8WXC6 57 aa10.98□□□□□ -0.65
USP43-202ENST00000570475 FAM236AA0A1B0GUQ0 79 aa10.97□□□□□ -0.65
USP43-202ENST00000570475 FAM236BA0A1B0GV22 79 aa10.97□□□□□ -0.65
USP43-202ENST00000570475 NTM-AS1Q6ZSK4 140 aa10.97□□□□□ -0.65
USP43-202ENST00000570475 SOSTDC1Q6X4U4 206 aa10.97□□□□□ -0.65
USP43-202ENST00000570475 IGLV10-54A0A075B6I4 117 aa10.97□□□□□ -0.65
USP43-202ENST00000570475 DNAJC9-AS1A6NH13 148 aa10.96□□□□□ -0.65
USP43-202ENST00000570475 SLPIP03973 132 aa10.96□□□□□ -0.65
USP43-202ENST00000570475 TIRAPP58753 221 aa10.96□□□□□ -0.65
USP43-202ENST00000570475 SMIM20Q8N5G0 67 aa10.96□□□□□ -0.66
USP43-202ENST00000570475 COX7A2LO14548 114 aa10.95□□□□□ -0.66
USP43-202ENST00000570475 PF4P02776 101 aa10.95□□□□□ -0.66
USP43-202ENST00000570475 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
USP43-202ENST00000570475 CDC42SE2Q9NRR3 84 aa10.94□□□□□ -0.66
USP43-202ENST00000570475 BBC3Q96PG8 261 aaPredicted RBP10.93□□□□□ -0.66
USP43-202ENST00000570475 SETXQ7Z333 2677 aaKnown RBP10.93□□□□□ -0.66
USP43-202ENST00000570475 IGLV4-60A0A075B6I1 120 aa10.93□□□□□ -0.66
USP43-202ENST00000570475 IGKV3D-7A0A0C4DH55 119 aa10.92□□□□□ -0.66
USP43-202ENST00000570475 LECT2O14960 151 aa10.92□□□□□ -0.66
USP43-202ENST00000570475 RNF152Q8N8N0 203 aa10.92□□□□□ -0.66
USP43-202ENST00000570475 C14orf132Q9NPU4 83 aa10.92□□□□□ -0.66
USP43-202ENST00000570475 CITED1Q99966 193 aa10.91□□□□□ -0.66
USP43-202ENST00000570475 GYPEP15421 78 aa10.9□□□□□ -0.66
USP43-202ENST00000570475 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
USP43-202ENST00000570475 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.66
USP43-202ENST00000570475 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
USP43-202ENST00000570475 TRBV10-1A0A0K0K1A3 114 aa10.89□□□□□ -0.67
USP43-202ENST00000570475 EDA2RQ9HAV5 297 aa10.88□□□□□ -0.67
USP43-202ENST00000570475 ITPR2Q14571 2701 aa10.88□□□□□ -0.67
USP43-202ENST00000570475 ATRQ13535 2644 aa10.88□□□□□ -0.67
USP43-202ENST00000570475 NHLRC4P0CG21 123 aaPredicted RBP10.88□□□□□ -0.67
USP43-202ENST00000570475 HIST1H4AP62805 103 aaKnown RBP10.88□□□□□ -0.67
USP43-202ENST00000570475 HERV-K104P63124 156 aa10.88□□□□□ -0.67
USP43-202ENST00000570475 PRR3P79522 188 aaKnown RBP10.88□□□□□ -0.67
USP43-202ENST00000570475 TIMM17BO60830 172 aa10.88□□□□□ -0.67
USP43-202ENST00000570475 SHISA2Q6UWI4 295 aa10.88□□□□□ -0.67
USP43-202ENST00000570475 MALP21145 153 aa10.87□□□□□ -0.67
USP43-202ENST00000570475 APCP25054 2843 aa10.87□□□□□ -0.67
USP43-202ENST00000570475 C9orf153Q5TBE3 101 aa10.87□□□□□ -0.67
USP43-202ENST00000570475 SDIM1Q6ZPB5 146 aa10.86□□□□□ -0.67
USP43-202ENST00000570475 C16orf74Q96GX8 76 aa10.86□□□□□ -0.67
USP43-202ENST00000570475 NCR3O14931 201 aa10.86□□□□□ -0.67
USP43-202ENST00000570475 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
USP43-202ENST00000570475 SMIM11BQ8TCY0 68 aa10.86□□□□□ -0.67
USP43-202ENST00000570475 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
USP43-202ENST00000570475 HELZ2Q9BYK8 2649 aaKnown RBP10.86□□□□□ -0.67
USP43-202ENST00000570475 A0A096LNT2 108 aa10.85□□□□□ -0.67
USP43-202ENST00000570475 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
USP43-202ENST00000570475 A0A087WYN8 130 aa10.85□□□□□ -0.67
USP43-202ENST00000570475 TMEM86BQ8N661 226 aa10.85□□□□□ -0.67
USP43-202ENST00000570475 ANGP03950 147 aaKnown RBP10.84□□□□□ -0.67
USP43-202ENST00000570475 CCL18P55774 89 aa10.84□□□□□ -0.67
USP43-202ENST00000570475 LINC01006Q8NI28 216 aa10.84□□□□□ -0.67
USP43-202ENST00000570475 TRBV6-8A0A0A6YYG3 113 aa10.84□□□□□ -0.67
USP43-202ENST00000570475 SS18Q15532 418 aa10.84□□□□□ -0.67
USP43-202ENST00000570475 LINC00482Q8N8I6 264 aa10.84□□□□□ -0.67
USP43-202ENST00000570475 INAFM2P0DMQ5 153 aa10.83□□□□□ -0.68
USP43-202ENST00000570475 UBR5O95071 2799 aaPredicted RBP10.82□□□□□ -0.68
USP43-202ENST00000570475 IGLV5-45A0A087WSX0 123 aa10.81□□□□□ -0.68
USP43-202ENST00000570475 TRAV25A0A0B4J276 109 aa10.81□□□□□ -0.68
USP43-202ENST00000570475 F5H768 121 aa10.8□□□□□ -0.68
USP43-202ENST00000570475 S100A7L2Q5SY68 101 aa10.8□□□□□ -0.68
USP43-202ENST00000570475 ZNF843Q8N446 348 aa10.8□□□□□ -0.68
USP43-202ENST00000570475 DEFB135Q30KP9 77 aa10.8□□□□□ -0.68
USP43-202ENST00000570475 C9orf116Q5BN46 136 aaPredicted RBP10.8□□□□□ -0.68
USP43-202ENST00000570475 SMR3AQ99954 134 aa10.8□□□□□ -0.68
USP43-202ENST00000570475 CR1P17927 2039 aa10.8□□□□□ -0.68
USP43-202ENST00000570475 LINC00269Q8N2A0 174 aa10.8□□□□□ -0.68
USP43-202ENST00000570475 TRACP01848 142 aa10.79□□□□□ -0.68
USP43-202ENST00000570475 M0QXV9 152 aa10.79□□□□□ -0.68
USP43-202ENST00000570475 LINC00643Q86TS7 51 aa10.79□□□□□ -0.68
USP43-202ENST00000570475 SMCR5Q8TEV8 140 aa10.78□□□□□ -0.68
USP43-202ENST00000570475 FSHBP01225 129 aa10.78□□□□□ -0.68
USP43-202ENST00000570475 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
USP43-202ENST00000570475 ACYP1P07311 99 aa10.78□□□□□ -0.68
USP43-202ENST00000570475 A0A087WVE0 104 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms