RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 LURAP1LQ8IV03 231 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 CEND1Q8N111 149 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 A0A0J9YXY3 114 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 EREGO14944 169 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 ZNF22P17026 224 aaPredicted RBP4.28□□□□□ -1.72
CYLD-216ENST00000569891 GAGE6Q13070 117 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 Q6ZUT4 128 aa4.28□□□□□ -1.72
CYLD-216ENST00000569891 IGLV4-69A0A075B6H9 119 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 CRPP02741 224 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 FABP2P12104 132 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 UBE2D1P51668 147 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 Q6ZSN1 163 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 PCP2Q8IVA1 136 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 TIMM17BO60830 172 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 LELP1Q5T871 98 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 C15orf53Q8NAA6 179 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 NDUFA12Q9UI09 145 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 C2CD3Q4AC94 2353 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 TRAV13-1A0A0B4J241 112 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 PRM2P04554 102 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 CXCL5P42830 114 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 Q8NAQ8 132 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 RAB37Q96AX2 223 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 CDC42SE2Q9NRR3 84 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
CYLD-216ENST00000569891 DYNC1H1Q14204 4646 aaKnown RBP4.27□□□□□ -1.73
CYLD-216ENST00000569891 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 CFAP161Q6P656 301 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 DEFB121Q5J5C9 76 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 C11orf45Q8TAV5 145 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 FN1P02751 2386 aaKnown RBP4.26□□□□□ -1.73
CYLD-216ENST00000569891 IGLV5-45A0A087WSX0 123 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 COX6CP09669 75 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 TCTAP57738 103 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 SAMD5Q5TGI4 173 aa4.26□□□□□ -1.73
CYLD-216ENST00000569891 C2orf91Q6ZV80 131 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 SBSPONQ8IVN8 264 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 MUC7Q8TAX7 377 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 F8P00451 2351 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 TRAV10A0A0B4J240 114 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 IGHV3-30-3P0DP02 117 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 MALP21145 153 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 RMI2Q96E14 147 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 A0A1B0GV90 55 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 ZFAND6Q6FIF0 208 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 TRAV8-4A0A0B4J246 113 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 C9orf118A6NHY6 69 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 NDUFA1O15239 70 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 LINC00694P0DN24 101 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 Q1RN00 199 aa4.25□□□□□ -1.73
CYLD-216ENST00000569891 GAGE10A6NGK3 116 aa4.24□□□□□ -1.73
CYLD-216ENST00000569891 PRIMA1Q86XR5 153 aa4.24□□□□□ -1.73
CYLD-216ENST00000569891 NHP2Q9NX24 153 aaKnown RBP4.24□□□□□ -1.73
CYLD-216ENST00000569891 IGKV2D-26A0A0A0MRZ7 120 aa4.24□□□□□ -1.73
CYLD-216ENST00000569891 DEFB104AQ8WTQ1 72 aa4.24□□□□□ -1.73
CYLD-216ENST00000569891 A0A0J9YY99 117 aa4.24□□□□□ -1.73
CYLD-216ENST00000569891 OPRPNQ99935 248 aaPredicted RBP4.24□□□□□ -1.73
CYLD-216ENST00000569891 ANGP03950 147 aaKnown RBP4.24□□□□□ -1.73
CYLD-216ENST00000569891 DPH3Q96FX2 82 aa4.24□□□□□ -1.73
CYLD-216ENST00000569891 SPINK8P0C7L1 97 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 CKS1BP61024 79 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 C6orf226Q5I0X4 101 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 COX7B2Q8TF08 81 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 PPDPFQ9H3Y8 114 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 CBY1Q9Y3M2 126 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 IGKV3OR2-268A0A0C4DH90 116 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 COX7A2LO14548 114 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 RPL13AP40429 203 aaKnown RBP4.23□□□□□ -1.73
CYLD-216ENST00000569891 RBX1P62877 108 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 NTM-AS1Q6ZSK4 140 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 SPANXDQ9BXN6 97 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 SPANXCQ9NY87 97 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 DEFB131BA0A096LNP1 70 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 LINC00242Q5T6M2 205 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 CEMP1Q6PRD7 247 aaPredicted RBP4.23□□□□□ -1.73
CYLD-216ENST00000569891 CDKN2A-AS1Q9UH64 79 aa4.23□□□□□ -1.73
CYLD-216ENST00000569891 LOC100131303A0A0U1RQF7 123 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 NHLRC4P0CG21 123 aaPredicted RBP4.22□□□□□ -1.73
CYLD-216ENST00000569891 CCL18P55774 89 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
CYLD-216ENST00000569891 IGHV3-64A0A075B6Q5 118 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 F8WDY8 70 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 J3QR89 54 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 SCGB1C2P0DMR2 95 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
CYLD-216ENST00000569891 CD164L2Q6UWJ8 174 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 C10orf126Q8N4M7 172 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 TRBV20-1A0A075B6N2 111 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 K7EP13 123 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 DEFB4AO15263 64 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 PSMB2P49721 201 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 C12orf74Q32Q52 190 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 TOMM7Q9P0U1 55 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 ERG28Q9UKR5 140 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 IGLV5-39A0A0G2JS06 123 aa4.22□□□□□ -1.73
CYLD-216ENST00000569891 LINC00959A0A1B0GUT2 108 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms