RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CLLU1Q5K131 121 aa9.52□□□□□ -0.89
HERPUD1-215ENST00000568676 C9JQL5 133 aa9.51□□□□□ -0.89
HERPUD1-215ENST00000568676 NDUFA1O15239 70 aa9.51□□□□□ -0.89
HERPUD1-215ENST00000568676 AMN1Q8IY45 258 aa9.51□□□□□ -0.89
HERPUD1-215ENST00000568676 UBE2D1P51668 147 aa9.5□□□□□ -0.89
HERPUD1-215ENST00000568676 RPL23P62829 140 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-215ENST00000568676 ADIRFQ15847 76 aa9.5□□□□□ -0.89
HERPUD1-215ENST00000568676 RNASE13Q5GAN3 156 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-215ENST00000568676 ORAOV1Q8WV07 137 aa9.5□□□□□ -0.89
HERPUD1-215ENST00000568676 RIGQ13278 110 aa9.49□□□□□ -0.89
HERPUD1-215ENST00000568676 Q6ZUT4 128 aa9.49□□□□□ -0.89
HERPUD1-215ENST00000568676 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
HERPUD1-215ENST00000568676 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
HERPUD1-215ENST00000568676 PRR4Q16378 134 aa9.48□□□□□ -0.89
HERPUD1-215ENST00000568676 NRACQ8N912 160 aa9.48□□□□□ -0.89
HERPUD1-215ENST00000568676 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
HERPUD1-215ENST00000568676 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
HERPUD1-215ENST00000568676 RPL32P62910 135 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-215ENST00000568676 IFITM2Q01629 132 aa9.47□□□□□ -0.89
HERPUD1-215ENST00000568676 C20orf78Q9BR46 151 aa9.47□□□□□ -0.89
HERPUD1-215ENST00000568676 SMKR1H3BMG3 65 aa9.46□□□□□ -0.9
HERPUD1-215ENST00000568676 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-215ENST00000568676 SPANXA1Q9NS26 97 aa9.46□□□□□ -0.9
HERPUD1-215ENST00000568676 V9GYV3 84 aa9.46□□□□□ -0.9
HERPUD1-215ENST00000568676 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
HERPUD1-215ENST00000568676 UBE2BP63146 152 aa9.45□□□□□ -0.9
HERPUD1-215ENST00000568676 MRPS36P82909 103 aaKnown RBP9.45□□□□□ -0.9
HERPUD1-215ENST00000568676 MUC2Q02817 5179 aa9.45□□□□□ -0.9
HERPUD1-215ENST00000568676 TRBV24-1A0A075B6N3 115 aa9.44□□□□□ -0.9
HERPUD1-215ENST00000568676 M0QXV9 152 aa9.44□□□□□ -0.9
HERPUD1-215ENST00000568676 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
HERPUD1-215ENST00000568676 UQCC3Q6UW78 93 aa9.44□□□□□ -0.9
HERPUD1-215ENST00000568676 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
HERPUD1-215ENST00000568676 C6orf48Q9UBA6 75 aa9.44□□□□□ -0.9
HERPUD1-215ENST00000568676 NAT8BQ9UHF3 227 aa9.44□□□□□ -0.9
HERPUD1-215ENST00000568676 TGIF2-C20orf24A0A0A6YYL0 155 aa9.43□□□□□ -0.9
HERPUD1-215ENST00000568676 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
HERPUD1-215ENST00000568676 HBBP68871 147 aa9.43□□□□□ -0.9
HERPUD1-215ENST00000568676 GAGE2EQ4V326 116 aa9.43□□□□□ -0.9
HERPUD1-215ENST00000568676 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
HERPUD1-215ENST00000568676 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
HERPUD1-215ENST00000568676 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
HERPUD1-215ENST00000568676 GAGE2DQ9UEU5 116 aa9.43□□□□□ -0.9
HERPUD1-215ENST00000568676 A0A1B0GW15 77 aa9.41□□□□□ -0.9
HERPUD1-215ENST00000568676 IFITM10A6NMD0 228 aa9.41□□□□□ -0.9
HERPUD1-215ENST00000568676 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
HERPUD1-215ENST00000568676 RPL39P62891 51 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-215ENST00000568676 MRPL51Q4U2R6 128 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-215ENST00000568676 KRTAP9-2Q9BYQ4 174 aa9.41□□□□□ -0.9
HERPUD1-215ENST00000568676 SMIM27A0A1W2PRY6 76 aa9.4□□□□□ -0.9
HERPUD1-215ENST00000568676 CKS2P33552 79 aa9.4□□□□□ -0.9
HERPUD1-215ENST00000568676 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
HERPUD1-215ENST00000568676 FAM104AQ969W3 186 aa9.4□□□□□ -0.9
HERPUD1-215ENST00000568676 NUPR1O60356 82 aa9.39□□□□□ -0.91
HERPUD1-215ENST00000568676 ZNF861PO60384 105 aa9.39□□□□□ -0.91
HERPUD1-215ENST00000568676 MT-ND4LP03901 98 aa9.39□□□□□ -0.91
HERPUD1-215ENST00000568676 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
HERPUD1-215ENST00000568676 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
HERPUD1-215ENST00000568676 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-215ENST00000568676 SMIM2Q9BVW6 85 aa9.39□□□□□ -0.91
HERPUD1-215ENST00000568676 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
HERPUD1-215ENST00000568676 S100A8P05109 93 aa9.38□□□□□ -0.91
HERPUD1-215ENST00000568676 TMEM218A2RU14 115 aa9.37□□□□□ -0.91
HERPUD1-215ENST00000568676 F8W036 122 aa9.37□□□□□ -0.91
HERPUD1-215ENST00000568676 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-215ENST00000568676 COMMD7Q86VX2 200 aa9.37□□□□□ -0.91
HERPUD1-215ENST00000568676 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
HERPUD1-215ENST00000568676 PYGO1Q9Y3Y4 419 aa9.36□□□□□ -0.91
HERPUD1-215ENST00000568676 PPBPP02775 128 aa9.35□□□□□ -0.91
HERPUD1-215ENST00000568676 LBHQ53QV2 105 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-215ENST00000568676 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-215ENST00000568676 SEC11CQ9BY50 192 aa9.35□□□□□ -0.91
HERPUD1-215ENST00000568676 RAB5AP20339 215 aa9.34□□□□□ -0.91
HERPUD1-215ENST00000568676 LINC00242Q5T6M2 205 aa9.34□□□□□ -0.91
HERPUD1-215ENST00000568676 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
HERPUD1-215ENST00000568676 D6R8Y8 96 aa9.33□□□□□ -0.92
HERPUD1-215ENST00000568676 MRPL54Q6P161 138 aaKnown RBP9.33□□□□□ -0.92
HERPUD1-215ENST00000568676 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
HERPUD1-215ENST00000568676 ADCYAP1P18509 176 aa9.32□□□□□ -0.92
HERPUD1-215ENST00000568676 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
HERPUD1-215ENST00000568676 CTDSP1Q9GZU7 261 aa9.32□□□□□ -0.92
HERPUD1-215ENST00000568676 TSPAN13O95857 204 aa9.31□□□□□ -0.92
HERPUD1-215ENST00000568676 PRSS2P07478 247 aa9.31□□□□□ -0.92
HERPUD1-215ENST00000568676 RPL28P46779 137 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-215ENST00000568676 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
HERPUD1-215ENST00000568676 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
HERPUD1-215ENST00000568676 C2orf88Q9BSF0 95 aa9.31□□□□□ -0.92
HERPUD1-215ENST00000568676 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
HERPUD1-215ENST00000568676 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
HERPUD1-215ENST00000568676 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
HERPUD1-215ENST00000568676 A0A1B0GXF2 115 aa9.3□□□□□ -0.92
HERPUD1-215ENST00000568676 NPYP01303 97 aa9.3□□□□□ -0.92
HERPUD1-215ENST00000568676 CRYGAP11844 174 aa9.3□□□□□ -0.92
HERPUD1-215ENST00000568676 CKS1BP61024 79 aa9.3□□□□□ -0.92
HERPUD1-215ENST00000568676 Q6ZN92 141 aa9.3□□□□□ -0.92
HERPUD1-215ENST00000568676 ORMDL3Q8N138 153 aa9.29□□□□□ -0.92
HERPUD1-215ENST00000568676 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
HERPUD1-215ENST00000568676 NPSP0C0P6 89 aa9.28□□□□□ -0.92
HERPUD1-215ENST00000568676 Q8IZM0 81 aa9.28□□□□□ -0.92
HERPUD1-215ENST00000568676 BCE1O60756 84 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms